Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:00 (133343): wrapper (7.7.26015): starting
16:12:00 (133343): wrapper: running run_atlas (--nthreads 3)
[2026-04-28 16:12:00] Arguments: --nthreads 3
[2026-04-28 16:12:00] Threads: 3
[2026-04-28 16:12:00] Checking for CVMFS
[2026-04-28 16:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 16:12:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 16:12:01] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 16:12:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 16:12:01] 2.9.2.0 3129 1196 68952 158969 2 50 30461635 36864001 0 130560 0 496373 99.984 43688 11619 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-28 16:12:01] CVMFS is ok
[2026-04-28 16:12:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 16:12:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 16:12:01] Further information can be found at the LHC@home message board.
[2026-04-28 16:12:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 16:12:01] Checking for apptainer binary...
[2026-04-28 16:12:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 16:12:01] Running /usr/bin/apptainer --version
[2026-04-28 16:12:01] apptainer version 1.4.1-1.1
[2026-04-28 16:12:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 16:12:01] thA325a
[2026-04-28 16:12:01] apptainer works
[2026-04-28 16:12:01] Set ATHENA_PROC_NUMBER=3
[2026-04-28 16:12:01] Set ATHENA_CORE_NUMBER=3
[2026-04-28 16:12:01] Starting ATLAS job with PandaID=7116343636
[2026-04-28 16:12:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 18:08:26]  *** The last 200 lines of the pilot log: ***
[2026-04-28 18:08:26] 2026-04-28 16:07:30,752 | INFO     | maximum number of monitored processes: 6
[2026-04-28 18:08:26] 2026-04-28 16:07:30,752 | INFO     | aborting job monitoring since job object (job id=7116343636) has expired
[2026-04-28 18:08:26] 2026-04-28 16:07:30,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 18:08:26] 2026-04-28 16:07:30,752 | INFO     | will abort loop
[2026-04-28 18:08:26] 2026-04-28 16:07:30,831 | INFO     | all job control threads have been joined
[2026-04-28 18:08:26] 2026-04-28 16:07:31,133 | INFO     | all data control threads have been joined
[2026-04-28 18:08:26] 2026-04-28 16:07:31,297 | INFO     | job.realtimelogging is not enabled
[2026-04-28 18:08:26] 2026-04-28 16:07:31,343 | INFO     | [job] retrieve thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,343 | INFO     | [job] queue monitor thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,357 | INFO     | [data] copytool_in thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,437 | INFO     | [payload] control thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,440 | INFO     | [payload] failed_post thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,758 | INFO     | [job] job monitor thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,832 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:31,837 | INFO     | [job] control thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,139 | INFO     | [data] control thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,160 | INFO     | [payload] validate_post thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,344 | INFO     | [data] copytool_out thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,541 | INFO     | [job] validate thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,680 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:32,686 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:07:33,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 18:08:26] 2026-04-28 16:07:37,586 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 18:08:26] 2026-04-28 16:08:00,440 | INFO     | PID=137389 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-28 18:08:26] 2026-04-28 16:08:00,441 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 18:08:26] 2026-04-28 16:08:00,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 18:08:26] 2026-04-28 16:08:00,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 18:08:26] 2026-04-28 16:08:20,726 | INFO     | [monitor] cgroup control has ended
[2026-04-28 18:08:26] 2026-04-28 16:08:21,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862599960384)>', '<ExcThread(monitor, started 139861960935168)>']
[2026-04-28 18:08:26] 2026-04-28 16:08:21,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 18:08:26] 2026-04-28 16:08:21,547 | INFO     | [monitor] control thread has ended
[2026-04-28 18:08:26] 2026-04-28 16:08:26,504 | INFO     | all workflow threads have been joined
[2026-04-28 18:08:26] 2026-04-28 16:08:26,504 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 18:08:26] 2026-04-28 16:08:26,504 | INFO     | traces error code: 0
[2026-04-28 18:08:26] 2026-04-28 16:08:26,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 18:08:26] 2026-04-28 16:08:26,554 [wrapper] ==== pilot stdout END ====
[2026-04-28 18:08:26] 2026-04-28 16:08:26,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 18:08:26] 2026-04-28 16:08:26,559 [wrapper] pilotpid: 137389
[2026-04-28 18:08:26] 2026-04-28 16:08:26,561 [wrapper] Pilot exit status: 0
[2026-04-28 18:08:26] 2026-04-28 16:08:26,569 [wrapper] pandaids: 7116343636
[2026-04-28 18:08:26] 2026-04-28 16:08:26,585 [wrapper] cleanup supervisor_pilot  147494 137390
[2026-04-28 18:08:26] 2026-04-28 16:08:26,587 [wrapper] Test setup, not cleaning
[2026-04-28 18:08:26] 2026-04-28 16:08:26,589 [wrapper] apfmon messages muted
[2026-04-28 18:08:26] 2026-04-28 16:08:26,592 [wrapper] ==== wrapper stdout END ====
[2026-04-28 18:08:26] 2026-04-28 16:08:26,594 [wrapper] ==== wrapper stderr END ====
[2026-04-28 18:08:26]  *** Error codes and diagnostics ***
[2026-04-28 18:08:26]     "exeErrorCode": 0,
[2026-04-28 18:08:26]     "pilotErrorCode": 0,
[2026-04-28 18:08:26]  *** Listing of results directory ***
[2026-04-28 18:08:26] total 472436
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc    683926 Apr 28 05:00 pilot3.tar.gz
[2026-04-28 18:08:26] -rwx------ 1 boinc boinc     36322 Apr 28 05:39 runpilot2-wrapper.sh
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      5631 Apr 28 05:39 queuedata.json
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc       100 Apr 28 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 18:08:26] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 16:11 run_atlas
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc       105 Apr 28 16:11 job.xml
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc 263109334 Apr 28 16:12 EVNT.49863867._000065.pool.root.1
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc    697409 Apr 28 16:12 input.tar.gz
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc     15667 Apr 28 16:12 start_atlas.sh
[2026-04-28 18:08:26] drwxrwx--x 2 boinc boinc      4096 Apr 28 16:12 shared
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc         0 Apr 28 16:12 boinc_setup_complete
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      6355 Apr 28 16:12 init_data.xml
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc         0 Apr 28 16:12 boinc_lockfile
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      2574 Apr 28 16:12 pandaJob.out
[2026-04-28 18:08:26] -rw------- 1 boinc boinc    993626 Apr 28 16:12 agis_schedconf.cvmfs.json
[2026-04-28 18:08:26] -rw------- 1 boinc boinc   1512704 Apr 28 16:12 agis_ddmendpoints.agis.ALL.json
[2026-04-28 18:08:26] -rw------- 1 boinc boinc       428 Apr 28 16:12 workernode_map.json
[2026-04-28 18:08:26] drwx------ 5 boinc boinc      4096 Apr 28 16:12 pilot3
[2026-04-28 18:08:26] -rw------- 1 boinc boinc 214743469 Apr 28 18:07 HITS.49863869._001612.pool.root.1
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc       487 Apr 28 18:07 boinc_task_state.xml
[2026-04-28 18:08:26] -rw------- 1 boinc boinc      1025 Apr 28 18:07 memory_monitor_summary.json
[2026-04-28 18:08:26] -rw------- 1 boinc boinc    245480 Apr 28 18:07 log.49863869._001612.job.log.tgz.1
[2026-04-28 18:08:26] -rw------- 1 boinc boinc      6336 Apr 28 18:07 heartbeat_new.json
[2026-04-28 18:08:26] -rw------- 1 boinc boinc      6227 Apr 28 18:07 heartbeat.json
[2026-04-28 18:08:26] -rw------- 1 boinc boinc        95 Apr 28 18:08 pilot_heartbeat.json
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc        27 Apr 28 18:08 wrapper_checkpoint.txt
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      8192 Apr 28 18:08 boinc_mmap_file
[2026-04-28 18:08:26] -rw------- 1 boinc boinc      6321 Apr 28 18:08 pilotlog.txt
[2026-04-28 18:08:26] -rw------- 1 boinc boinc    659399 Apr 28 18:08 log.49863869._001612.job.log.1
[2026-04-28 18:08:26] -rw------- 1 boinc boinc       357 Apr 28 18:08 output.list
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc       410 Apr 28 18:08 runtime_log
[2026-04-28 18:08:26] -rw------- 1 boinc boinc    921600 Apr 28 18:08 result.tar.gz
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      8524 Apr 28 18:08 runtime_log.err
[2026-04-28 18:08:26] -rw------- 1 boinc boinc       659 Apr 28 18:08 2be801affb71.diag
[2026-04-28 18:08:26] -rw-r--r-- 1 boinc boinc      7060 Apr 28 18:08 stderr.txt
[2026-04-28 18:08:26] HITS file was successfully produced:
[2026-04-28 18:08:26] -rw------- 1 boinc boinc 214743469 Apr 28 18:07 shared/HITS.pool.root.1
[2026-04-28 18:08:26]  *** Contents of shared directory: ***
[2026-04-28 18:08:26] total 468264
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc 263109334 Apr 28 16:12 ATLAS.root_0
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc    697409 Apr 28 16:12 input.tar.gz
[2026-04-28 18:08:26] -rw-r--r-- 2 boinc boinc     15667 Apr 28 16:12 start_atlas.sh
[2026-04-28 18:08:26] -rw------- 1 boinc boinc 214743469 Apr 28 18:07 HITS.pool.root.1
[2026-04-28 18:08:26] -rw------- 1 boinc boinc    921600 Apr 28 18:08 result.tar.gz
18:08:27 (133343): run_atlas exited; CPU time 19341.888821
18:08:27 (133343): called boinc_finish(0)

</stderr_txt>
]]>

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