Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:45:56 (17961): wrapper (7.7.26015): starting
05:45:56 (17961): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 05:45:56] Arguments: --nthreads 4
[2026-04-28 05:45:56] Threads: 4
[2026-04-28 05:45:56] Checking for CVMFS
[2026-04-28 05:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 05:46:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 05:46:55] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 05:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 05:46:56] 2.12.7.0 18182 0 25000 158954 3 1 2853729 4194304 0 130560 0 0 0.000 1282 40 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-04-28 05:46:56] CVMFS is ok
[2026-04-28 05:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 05:46:56] Checking for apptainer binary...
[2026-04-28 05:46:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 05:46:56] Running /usr/bin/apptainer --version
[2026-04-28 05:46:56] apptainer version 1.0.3
[2026-04-28 05:46:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 05:46:56] TeeC02
[2026-04-28 05:46:56] apptainer works
[2026-04-28 05:46:56] Set ATHENA_PROC_NUMBER=4
[2026-04-28 05:46:56] Set ATHENA_CORE_NUMBER=4
[2026-04-28 05:46:56] Starting ATLAS job with PandaID=7116343101
[2026-04-28 05:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 09:41:01]  *** The last 200 lines of the pilot log: ***
[2026-04-28 09:41:01] 2026-04-28 08:40:14,685 | INFO     | reading metadata from: /home/m/BOINC/slots/1/PanDA_Pilot-7116343101/jobReport.json
[2026-04-28 09:41:01] 2026-04-28 08:40:14,690 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/1/workernode_map.json
[2026-04-28 09:41:01] 2026-04-28 08:40:14,691 | INFO     | this job has now completed (state=finished)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,691 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,691 | INFO     | log transfer has been attempted: DONE
[2026-04-28 09:41:01] 2026-04-28 08:40:14,691 | INFO     | job 7116343101 has finished - writing final server update
[2026-04-28 09:41:01] 2026-04-28 08:40:14,692 | INFO     | total number of processed events: 400 (read)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,713 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7116343101/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,714 | INFO     | extracted standard info from prmon json
[2026-04-28 09:41:01] 2026-04-28 08:40:14,714 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 09:41:01] 2026-04-28 08:40:14,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 09:41:01] 2026-04-28 08:40:14,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 09:41:01] 2026-04-28 08:40:14,722 | INFO     | fitting pss+swap vs Time
[2026-04-28 09:41:01] 2026-04-28 08:40:14,723 | INFO     | sum of square deviations: 3675207587.7324543
[2026-04-28 09:41:01] 2026-04-28 08:40:14,726 | INFO     | sum of deviations: -23402709734.837727
[2026-04-28 09:41:01] 2026-04-28 08:40:14,726 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,726 | INFO     | mean y: 2376609.3728070175
[2026-04-28 09:41:01] 2026-04-28 08:40:14,727 | INFO     | intersect: 2376609.3728070175
[2026-04-28 09:41:01] 2026-04-28 08:40:14,727 | INFO     | chi2: 2.8891289106869107
[2026-04-28 09:41:01] 2026-04-28 08:40:14,728 | INFO     | sum of square deviations: 3438687407.7040377
[2026-04-28 09:41:01] 2026-04-28 08:40:14,731 | INFO     | sum of deviations: -8301928687.520167
[2026-04-28 09:41:01] 2026-04-28 08:40:14,731 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,732 | INFO     | mean y: 2386178.6188340806
[2026-04-28 09:41:01] 2026-04-28 08:40:14,732 | INFO     | intersect: 2386178.6188340806
[2026-04-28 09:41:01] 2026-04-28 08:40:14,733 | INFO     | chi2: 2.0958802893003297
[2026-04-28 09:41:01] 2026-04-28 08:40:14,733 | INFO     | current chi2=2.0958802893003297 (change=27.456324930755017 %)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,733 | INFO     | sum of square deviations: 3212539515.174311
[2026-04-28 09:41:01] 2026-04-28 08:40:14,736 | INFO     | sum of deviations: -8038031988.449533
[2026-04-28 09:41:01] 2026-04-28 08:40:14,736 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,737 | INFO     | mean y: 2386356.6146788993
[2026-04-28 09:41:01] 2026-04-28 08:40:14,737 | INFO     | intersect: 2386356.6146788993
[2026-04-28 09:41:01] 2026-04-28 08:40:14,737 | INFO     | chi2: 2.09517015827703
[2026-04-28 09:41:01] 2026-04-28 08:40:14,738 | INFO     | current chi2=2.09517015827703 (change=0.033882232058997784 %)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,738 | INFO     | right removable region: 217
[2026-04-28 09:41:01] 2026-04-28 08:40:14,738 | INFO     | sum of square deviations: 3438677037.7040377
[2026-04-28 09:41:01] 2026-04-28 08:40:14,740 | INFO     | sum of deviations: -62826117800.61439
[2026-04-28 09:41:01] 2026-04-28 08:40:14,740 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,740 | INFO     | mean y: 2401840.5067264573
[2026-04-28 09:41:01] 2026-04-28 08:40:14,741 | INFO     | intersect: 2401840.5067264573
[2026-04-28 09:41:01] 2026-04-28 08:40:14,741 | INFO     | chi2: 1.1595763683514526
[2026-04-28 09:41:01] 2026-04-28 08:40:14,741 | INFO     | current chi2=1.1595763683514526 (change=59.86415268414744 %)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,742 | INFO     | sum of square deviations: 3212518775.174311
[2026-04-28 09:41:01] 2026-04-28 08:40:14,743 | INFO     | sum of deviations: -52463393081.275215
[2026-04-28 09:41:01] 2026-04-28 08:40:14,743 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,743 | INFO     | mean y: 2394837.6926605506
[2026-04-28 09:41:01] 2026-04-28 08:40:14,744 | INFO     | intersect: 2394837.6926605506
[2026-04-28 09:41:01] 2026-04-28 08:40:14,744 | INFO     | chi2: 1.1236081222211465
[2026-04-28 09:41:01] 2026-04-28 08:40:14,744 | INFO     | current chi2=1.1236081222211465 (change=3.10184366566917 %)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,744 | INFO     | left removable region: 10
[2026-04-28 09:41:01] 2026-04-28 08:40:14,744 | INFO     | sum of square deviations: 2750357795.60386
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | sum of deviations: -36360069623.91786
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | mean x (centered): 0.0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | mean y: 2406062.995169082
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | intersect: 2406062.995169082
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | chi2: 0.29849085951246257
[2026-04-28 09:41:01] 2026-04-28 08:40:14,746 | INFO     | current memory leak: -13.22 B/s (using 207 data points, chi2=0.30)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | could have reported an average CPU frequency of 3103 MHz (11 samples)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | ..............................
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . Timing measurements:
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . get job = 0 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . initial setup = 39 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . payload setup = 6 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . stage-in = 0 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . payload execution = 13872 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,747 | INFO     | . stage-out = 6 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,748 | INFO     | . log creation = 0 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,748 | INFO     | ..............................
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | 
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | job summary report
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | --------------------------------------------------
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | PanDA job id: 7116343101
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | task id: 49863860
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | errors: (none)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | pilot state: finished 
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | transexitcode: 0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | exeerrorcode: 0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | exeerrordiag: 
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | exitcode: 0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | exitmsg: OK
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | cpuconsumptiontime: 53758 s
[2026-04-28 09:41:01] 2026-04-28 08:40:14,796 | INFO     | nevents: 400
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | neventsw: 0
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | pid: 26653
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | pgrp: 26653
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | corecount: 4
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | event service: False
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | sizes: {0: 2280664, 1: 2282549, 11: 2282549, 13883: 2313314, 13890: 2322366, 13891: 2322504}
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | --------------------------------------------------
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | 
[2026-04-28 09:41:01] 2026-04-28 08:40:14,797 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-04-28 09:41:01] 2026-04-28 08:40:14,808 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | job 7116343101 has completed (purged errors)
[2026-04-28 09:41:01] 2026-04-28 08:40:14,810 | INFO     | overall cleanup function is called
[2026-04-28 09:41:01] 2026-04-28 08:40:15,817 | INFO     | --- collectZombieJob: --- 10, [26653]
[2026-04-28 09:41:01] 2026-04-28 08:40:15,817 | INFO     | zombie collector waiting for pid 26653
[2026-04-28 09:41:01] 2026-04-28 08:40:15,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 09:41:01] 2026-04-28 08:40:15,818 | INFO     | collected zombie processes
[2026-04-28 09:41:01] 2026-04-28 08:40:15,818 | INFO     | will attempt to kill all subprocesses of pid=26653
[2026-04-28 09:41:01] 2026-04-28 08:40:15,868 | INFO     | process IDs to be killed: [26653] (in reverse order)
[2026-04-28 09:41:01] 2026-04-28 08:40:15,899 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 09:41:01] 2026-04-28 08:40:15,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 09:41:01] 2026-04-28 08:40:15,901 | INFO     | did not find any defunct processes belonging to 26653
[2026-04-28 09:41:01] 2026-04-28 08:40:15,902 | INFO     | did not find any defunct processes belonging to 26653
[2026-04-28 09:41:01] 2026-04-28 08:40:15,902 | INFO     | Ready for new job
[2026-04-28 09:41:01] 2026-04-28 08:40:15,903 | INFO     | ***************************************
[2026-04-28 09:41:01] 2026-04-28 08:40:15,903 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 09:41:01] 2026-04-28 08:40:15,903 | INFO     | ***************************************
[2026-04-28 09:41:01] 2026-04-28 08:40:15,904 | INFO     | 
[2026-04-28 09:41:01] 2026-04-28 08:40:15,926 | INFO     | architecture information:
[2026-04-28 09:41:01] 2026-04-28 08:40:15,927 | INFO     | executing command: cat /etc/os-release
[2026-04-28 09:41:01] 2026-04-28 08:40:15,935 | INFO     | cat /etc/os-release:
[2026-04-28 09:41:01] NAME="CentOS Linux"
[2026-04-28 09:41:01] VERSION="7 (Core)"
[2026-04-28 09:41:01] ID="centos"
[2026-04-28 09:41:01] ID_LIKE="rhel fedora"
[2026-04-28 09:41:01] VERSION_ID="7"
[2026-04-28 09:41:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 09:41:01] ANSI_COLOR="0;31"
[2026-04-28 09:41:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 09:41:01] HOME_URL="https://www.centos.org/"
[2026-04-28 09:41:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 09:41:01] 
[2026-04-28 09:41:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 09:41:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 09:41:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 09:41:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 09:41:01] 
[2026-04-28 09:41:01] 2026-04-28 08:40:15,936 | INFO     | ***************************************
[2026-04-28 09:41:01] 2026-04-28 08:40:16,439 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | INFO     | sufficient remaining disk space (432839589888 B)
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | INFO     | update_server=False
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 09:41:01] 2026-04-28 08:40:16,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:41:01] 2026-04-28 08:40:16,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 09:41:01] 2026-04-28 08:40:16,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:41:01] 2026-04-28 08:40:16,452 | INFO     | aborting loop
[2026-04-28 09:41:01] 2026-04-28 08:40:16,489 | INFO     | all job control threads have been joined
[2026-04-28 09:41:01] 2026-04-28 08:40:16,625 | INFO     | all data control threads have been joined
[2026-04-28 09:41:01] 2026-04-28 08:40:17,078 | INFO     | all payload control threads have been joined
[2026-04-28 09:41:01] 2026-04-28 08:40:17,457 | INFO     | [job] retrieve thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,458 | INFO     | [job] job monitor thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,459 | INFO     | [job] queue monitor thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,495 | INFO     | [job] control thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,631 | INFO     | [data] control thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,707 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,877 | INFO     | [job] validate thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:17,972 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,043 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,078 | INFO     | [payload] failed_post thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,083 | INFO     | [payload] control thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,435 | INFO     | [data] copytool_in thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,458 | INFO     | [data] copytool_out thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:18,744 | INFO     | [payload] validate_post thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:19,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 09:41:01] 2026-04-28 08:40:23,810 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 09:41:01] 2026-04-28 08:40:47,182 | INFO     | PID=22272 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 09:41:01] 2026-04-28 08:40:47,182 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 09:41:01] 2026-04-28 08:40:47,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 09:41:01] 2026-04-28 08:40:47,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 09:41:01] 2026-04-28 08:40:55,335 | INFO     | [monitor] cgroup control has ended
[2026-04-28 09:41:01] 2026-04-28 08:40:56,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564593932096)>', '<ExcThread(monitor, started 140563944830720)>']
[2026-04-28 09:41:01] 2026-04-28 08:40:57,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 09:41:01] 2026-04-28 08:40:57,234 | INFO     | [monitor] control thread has ended
[2026-04-28 09:41:01] 2026-04-28 08:41:01,350 | INFO     | all workflow threads have been joined
[2026-04-28 09:41:01] 2026-04-28 08:41:01,351 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 09:41:01] 2026-04-28 08:41:01,351 | INFO     | traces error code: 0
[2026-04-28 09:41:01] 2026-04-28 08:41:01,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 09:41:01] 2026-04-28 08:41:01,432 [wrapper] ==== pilot stdout END ====
[2026-04-28 09:41:01] 2026-04-28 08:41:01,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 09:41:01] 2026-04-28 08:41:01,436 [wrapper] pilotpid: 22272
[2026-04-28 09:41:01] 2026-04-28 08:41:01,438 [wrapper] Pilot exit status: 0
[2026-04-28 09:41:01] 2026-04-28 08:41:01,445 [wrapper] pandaids: 7116343101
[2026-04-28 09:41:01] 2026-04-28 08:41:01,463 [wrapper] cleanup supervisor_pilot   33842 22273
[2026-04-28 09:41:01] 2026-04-28 08:41:01,465 [wrapper] Test setup, not cleaning
[2026-04-28 09:41:01] 2026-04-28 08:41:01,467 [wrapper] apfmon messages muted
[2026-04-28 09:41:01] 2026-04-28 08:41:01,469 [wrapper] ==== wrapper stdout END ====
[2026-04-28 09:41:01] 2026-04-28 08:41:01,471 [wrapper] ==== wrapper stderr END ====
[2026-04-28 09:41:01]  *** Error codes and diagnostics ***
[2026-04-28 09:41:01]     "exeErrorCode": 0,
[2026-04-28 09:41:01]     "pilotErrorCode": 0,
[2026-04-28 09:41:01]  *** Listing of results directory ***
[2026-04-28 09:41:01] total 464516
[2026-04-28 09:41:01] -rw-r--r-- 1 m m    683926 Apr 28 01:34 pilot3.tar.gz
[2026-04-28 09:41:01] -rwx------ 1 m m     36322 Apr 28 01:35 runpilot2-wrapper.sh
[2026-04-28 09:41:01] -rw-r--r-- 1 m m      5631 Apr 28 01:36 queuedata.json
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m       100 Apr 28 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 09:41:01] -rwxr-xr-x 1 m m      7986 Apr 28 05:45 run_atlas
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m       105 Apr 28 05:45 job.xml
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m      5873 Apr 28 05:45 init_data.xml
[2026-04-28 09:41:01] -rw-r--r-- 2 m m 260475707 Apr 28 05:45 EVNT.49863858._000091.pool.root.1
[2026-04-28 09:41:01] -rw-r--r-- 2 m m     15667 Apr 28 05:45 start_atlas.sh
[2026-04-28 09:41:01] drwxrwx--x 2 m m      4096 Apr 28 05:45 shared
[2026-04-28 09:41:01] -rw-r--r-- 2 m m    697421 Apr 28 05:45 input.tar.gz
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m         0 Apr 28 05:45 boinc_lockfile
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m      2584 Apr 28 05:46 pandaJob.out
[2026-04-28 09:41:01] -rw------- 1 m m    994482 Apr 28 05:47 agis_schedconf.cvmfs.json
[2026-04-28 09:41:01] -rw------- 1 m m       414 Apr 28 05:48 workernode_map.json
[2026-04-28 09:41:01] drwx------ 5 m m      4096 Apr 28 05:48 pilot3
[2026-04-28 09:41:01] -rw------- 1 m m 207832493 Apr 28 09:39 HITS.49863860._002274.pool.root.1
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m       488 Apr 28 09:39 boinc_task_state.xml
[2026-04-28 09:41:01] -rw------- 1 m m      1015 Apr 28 09:40 memory_monitor_summary.json
[2026-04-28 09:41:01] -rw------- 1 m m        95 Apr 28 09:40 pilot_heartbeat.json
[2026-04-28 09:41:01] -rw------- 1 m m   1512704 Apr 28 09:40 agis_ddmendpoints.agis.ALL.json
[2026-04-28 09:41:01] -rw------- 1 m m    340505 Apr 28 09:40 log.49863860._002274.job.log.tgz.1
[2026-04-28 09:41:01] -rw------- 1 m m      6312 Apr 28 09:40 heartbeat_new.json
[2026-04-28 09:41:01] -rw------- 1 m m      6203 Apr 28 09:40 heartbeat.json
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m      8192 Apr 28 09:40 boinc_mmap_file
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m        28 Apr 28 09:40 wrapper_checkpoint.txt
[2026-04-28 09:41:01] -rw------- 1 m m      4745 Apr 28 09:41 pilotlog.txt
[2026-04-28 09:41:01] -rw------- 1 m m   1266272 Apr 28 09:41 log.49863860._002274.job.log.1
[2026-04-28 09:41:01] -rw------- 1 m m       357 Apr 28 09:41 output.list
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m       410 Apr 28 09:41 runtime_log
[2026-04-28 09:41:01] -rw------- 1 m m   1628160 Apr 28 09:41 result.tar.gz
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m      8352 Apr 28 09:41 runtime_log.err
[2026-04-28 09:41:01] -rw------- 1 m m       639 Apr 28 09:41 00d52b4ebb4a.diag
[2026-04-28 09:41:01] -rw-rw-r-- 1 m m     20708 Apr 28 09:41 stderr.txt
[2026-04-28 09:41:01] HITS file was successfully produced:
[2026-04-28 09:41:01] -rw------- 1 m m 207832493 Apr 28 09:39 shared/HITS.pool.root.1
[2026-04-28 09:41:01]  *** Contents of shared directory: ***
[2026-04-28 09:41:01] total 459636
[2026-04-28 09:41:01] -rw-r--r-- 2 m m 260475707 Apr 28 05:45 ATLAS.root_0
[2026-04-28 09:41:01] -rw-r--r-- 2 m m     15667 Apr 28 05:45 start_atlas.sh
[2026-04-28 09:41:01] -rw-r--r-- 2 m m    697421 Apr 28 05:45 input.tar.gz
[2026-04-28 09:41:01] -rw------- 1 m m 207832493 Apr 28 09:39 HITS.pool.root.1
[2026-04-28 09:41:01] -rw------- 1 m m   1628160 Apr 28 09:41 result.tar.gz
09:41:02 (17961): run_atlas exited; CPU time 53891.952607
09:41:02 (17961): called boinc_finish(0)

</stderr_txt>
]]>

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