Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:30:42 (1150751): wrapper (7.7.26015): starting
22:30:42 (1150751): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 22:30:42] Arguments: --nthreads 4
[2026-04-28 22:30:42] Threads: 4
[2026-04-28 22:30:42] Checking for CVMFS
[2026-04-28 22:30:42] No cvmfs_config command found, will try listing directly
[2026-04-28 22:30:42] CVMFS is ok
[2026-04-28 22:30:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 22:30:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 22:30:42] Further information can be found at the LHC@home message board.
[2026-04-28 22:30:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 22:30:42] Checking for apptainer binary...
[2026-04-28 22:30:42] which: no apptainer in ((null))
[2026-04-28 22:30:42] apptainer is not installed, using version from CVMFS
[2026-04-28 22:30:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 22:30:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-28 22:30:42] apptainer works
[2026-04-28 22:30:42] Set ATHENA_PROC_NUMBER=4
[2026-04-28 22:30:42] Set ATHENA_CORE_NUMBER=4
[2026-04-28 22:30:42] Starting ATLAS job with PandaID=7116208823
[2026-04-28 22:30:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 02:49:29]  *** The last 200 lines of the pilot log: ***
[2026-04-29 02:49:29] 2026-04-29 00:48:44,721 | INFO     | job 7116208823 has state=finished
[2026-04-29 02:49:29] 2026-04-29 00:48:44,721 | INFO     | preparing for final server update for job 7116208823 in state='finished'
[2026-04-29 02:49:29] 2026-04-29 00:48:44,722 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7116208823/jobReport.json
[2026-04-29 02:49:29] 2026-04-29 00:48:44,726 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/0/workernode_map.json
[2026-04-29 02:49:29] 2026-04-29 00:48:44,726 | INFO     | this job has now completed (state=finished)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,726 | INFO     | log transfer has been attempted: DONE
[2026-04-29 02:49:29] 2026-04-29 00:48:44,727 | INFO     | job 7116208823 has finished - writing final server update
[2026-04-29 02:49:29] 2026-04-29 00:48:44,727 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3842356/.job.ad'
[2026-04-29 02:49:29] 2026-04-29 00:48:44,727 | INFO     | total number of processed events: 400 (read)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,739 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7116208823/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,740 | INFO     | extracted standard info from prmon json
[2026-04-29 02:49:29] 2026-04-29 00:48:44,740 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 02:49:29] 2026-04-29 00:48:44,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 02:49:29] 2026-04-29 00:48:44,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 02:49:29] 2026-04-29 00:48:44,745 | INFO     | fitting pss+swap vs Time
[2026-04-29 02:49:29] 2026-04-29 00:48:44,746 | INFO     | sum of square deviations: 5021496942.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,747 | INFO     | sum of deviations: -47362596244.00008
[2026-04-29 02:49:29] 2026-04-29 00:48:44,748 | INFO     | mean x (centered): 0.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,748 | INFO     | mean y: 2406454.5928853755
[2026-04-29 02:49:29] 2026-04-29 00:48:44,748 | INFO     | intersect: 2406454.5928853755
[2026-04-29 02:49:29] 2026-04-29 00:48:44,748 | INFO     | chi2: 1.5622163964724276
[2026-04-29 02:49:29] 2026-04-29 00:48:44,749 | INFO     | sum of square deviations: 4729621702.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,750 | INFO     | sum of deviations: -46447357215.50001
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | mean x (centered): 0.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | mean y: 2406932.8427419355
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | intersect: 2406932.8427419355
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | chi2: 1.5578855370885416
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | current chi2=1.5578855370885416 (change=0.2772253186988258 %)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,751 | INFO     | right removable region: 247
[2026-04-29 02:49:29] 2026-04-29 00:48:44,752 | INFO     | sum of square deviations: 4729621702.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | sum of deviations: -72816477902.49998
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | mean x (centered): 0.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | mean y: 2419559.4717741935
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | intersect: 2419559.4717741935
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | chi2: 0.3402856682337821
[2026-04-29 02:49:29] 2026-04-29 00:48:44,754 | INFO     | current chi2=0.3402856682337821 (change=78.2177636208296 %)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,755 | INFO     | sum of square deviations: 4449281562.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,756 | INFO     | sum of deviations: -64354245003.00004
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | mean x (centered): 0.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | mean y: 2414939.864197531
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | intersect: 2414939.864197531
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | chi2: 0.32611378367129895
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | current chi2=0.32611378367129895 (change=4.1647021562914635 %)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,757 | INFO     | left removable region: 10
[2026-04-29 02:49:29] 2026-04-29 00:48:44,758 | INFO     | sum of square deviations: 4127772278.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,759 | INFO     | sum of deviations: -62922283545.000015
[2026-04-29 02:49:29] 2026-04-29 00:48:44,760 | INFO     | mean x (centered): 0.0
[2026-04-29 02:49:29] 2026-04-29 00:48:44,760 | INFO     | mean y: 2415755.075949367
[2026-04-29 02:49:29] 2026-04-29 00:48:44,760 | INFO     | intersect: 2415755.075949367
[2026-04-29 02:49:29] 2026-04-29 00:48:44,760 | INFO     | chi2: 0.3200523680261159
[2026-04-29 02:49:29] 2026-04-29 00:48:44,760 | INFO     | current memory leak: -15.24 B/s (using 237 data points, chi2=0.32)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | could have reported an average CPU frequency of 2835 MHz (12 samples)
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | ..............................
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | . Timing measurements:
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | . get job = 0 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | . initial setup = 5 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | . payload setup = 9 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,761 | INFO     | . stage-in = 0 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,762 | INFO     | . payload execution = 15435 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,762 | INFO     | . stage-out = 1 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,762 | INFO     | . log creation = 0 s
[2026-04-29 02:49:29] 2026-04-29 00:48:44,762 | INFO     | ..............................
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | 
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | job summary report
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | --------------------------------------------------
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | PanDA job id: 7116208823
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | task id: 49820375
[2026-04-29 02:49:29] 2026-04-29 00:48:45,278 | INFO     | errors: (none)
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | pilot state: finished 
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | transexitcode: 0
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | exeerrorcode: 0
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | exeerrordiag: 
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | exitcode: 0
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | exitmsg: OK
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | cpuconsumptiontime: 59851 s
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | nevents: 400
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | neventsw: 0
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | pid: 1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | pgrp: 1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:45,279 | INFO     | corecount: 4
[2026-04-29 02:49:29] 2026-04-29 00:48:45,280 | INFO     | event service: False
[2026-04-29 02:49:29] 2026-04-29 00:48:45,280 | INFO     | sizes: {0: 2282523, 11: 2282523, 15449: 2313659, 15451: 2322679, 15454: 2322735, 15455: 2322929}
[2026-04-29 02:49:29] 2026-04-29 00:48:45,280 | INFO     | --------------------------------------------------
[2026-04-29 02:49:29] 2026-04-29 00:48:45,280 | INFO     | 
[2026-04-29 02:49:29] 2026-04-29 00:48:45,280 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-04-29 02:49:29] 2026-04-29 00:48:45,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | job 7116208823 has completed (purged errors)
[2026-04-29 02:49:29] 2026-04-29 00:48:45,302 | INFO     | overall cleanup function is called
[2026-04-29 02:49:29] 2026-04-29 00:48:46,310 | INFO     | --- collectZombieJob: --- 10, [1160118]
[2026-04-29 02:49:29] 2026-04-29 00:48:46,310 | INFO     | zombie collector waiting for pid 1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:46,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 02:49:29] 2026-04-29 00:48:46,310 | INFO     | collected zombie processes
[2026-04-29 02:49:29] 2026-04-29 00:48:46,310 | INFO     | will attempt to kill all subprocesses of pid=1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:46,578 | INFO     | process IDs to be killed: [1160118] (in reverse order)
[2026-04-29 02:49:29] 2026-04-29 00:48:46,688 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 02:49:29] 2026-04-29 00:48:46,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 02:49:29] 2026-04-29 00:48:46,699 | INFO     | did not find any defunct processes belonging to 1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:46,709 | INFO     | did not find any defunct processes belonging to 1160118
[2026-04-29 02:49:29] 2026-04-29 00:48:46,710 | INFO     | Ready for new job
[2026-04-29 02:49:29] 2026-04-29 00:48:46,712 | INFO     | ***************************************
[2026-04-29 02:49:29] 2026-04-29 00:48:46,712 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 02:49:29] 2026-04-29 00:48:46,712 | INFO     | ***************************************
[2026-04-29 02:49:29] 2026-04-29 00:48:46,712 | INFO     | 
[2026-04-29 02:49:29] 2026-04-29 00:48:46,716 | INFO     | architecture information:
[2026-04-29 02:49:29] 2026-04-29 00:48:46,716 | INFO     | executing command: cat /etc/os-release
[2026-04-29 02:49:29] 2026-04-29 00:48:46,731 | INFO     | cat /etc/os-release:
[2026-04-29 02:49:29] NAME="CentOS Linux"
[2026-04-29 02:49:29] VERSION="7 (Core)"
[2026-04-29 02:49:29] ID="centos"
[2026-04-29 02:49:29] ID_LIKE="rhel fedora"
[2026-04-29 02:49:29] VERSION_ID="7"
[2026-04-29 02:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 02:49:29] ANSI_COLOR="0;31"
[2026-04-29 02:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 02:49:29] HOME_URL="https://www.centos.org/"
[2026-04-29 02:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 02:49:29] 
[2026-04-29 02:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 02:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 02:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 02:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 02:49:29] 
[2026-04-29 02:49:29] 2026-04-29 00:48:46,731 | INFO     | ***************************************
[2026-04-29 02:49:29] 2026-04-29 00:48:47,234 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-04-29 02:49:29] 2026-04-29 00:48:47,251 | INFO     | sufficient remaining disk space (21578645504 B)
[2026-04-29 02:49:29] 2026-04-29 00:48:47,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 02:49:29] 2026-04-29 00:48:47,251 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 02:49:29] 2026-04-29 00:48:47,251 | INFO     | update_server=False
[2026-04-29 02:49:29] 2026-04-29 00:48:47,252 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 02:49:29] 2026-04-29 00:48:47,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 02:49:29] 2026-04-29 00:48:47,342 | INFO     | all payload control threads have been joined
[2026-04-29 02:49:29] 2026-04-29 00:48:47,355 | INFO     | all data control threads have been joined
[2026-04-29 02:49:29] 2026-04-29 00:48:47,573 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-29 02:49:29] 2026-04-29 00:48:47,573 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-29 02:49:29] 2026-04-29 00:48:47,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:49:29] 2026-04-29 00:48:47,574 | INFO     | will abort loop
[2026-04-29 02:49:29] 2026-04-29 00:48:48,045 | INFO     | all job control threads have been joined
[2026-04-29 02:49:29] 2026-04-29 00:48:48,257 | INFO     | [job] retrieve thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,280 | INFO     | [payload] validate_post thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,283 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,348 | INFO     | [payload] control thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,360 | INFO     | [data] control thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,384 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,467 | INFO     | [payload] failed_post thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,579 | INFO     | [job] job monitor thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:48,726 | INFO     | [data] copytool_in thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:49,051 | INFO     | [job] control thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:49,167 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:49,229 | INFO     | [job] validate thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:49,257 | INFO     | [data] copytool_out thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:49,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 02:49:29] 2026-04-29 00:48:50,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 02:49:29] 2026-04-29 00:48:50,869 | INFO     | [job] queue monitor thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:54,126 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:48:57,755 | INFO     | job.realtimelogging is not enabled
[2026-04-29 02:49:29] 2026-04-29 00:48:58,760 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 02:49:29] 2026-04-29 00:49:17,849 | INFO     | PID=1154898 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 02:49:29] 2026-04-29 00:49:17,849 | INFO     | .. there are 9 such processes running
[2026-04-29 02:49:29] 2026-04-29 00:49:17,849 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 02:49:29] 2026-04-29 00:49:17,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 02:49:29] 2026-04-29 00:49:17,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 02:49:29] 2026-04-29 00:49:21,859 | INFO     | [monitor] cgroup control has ended
[2026-04-29 02:49:29] 2026-04-29 00:49:23,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22907720636224)>', '<ExcThread(monitor, started 22907486226176)>']
[2026-04-29 02:49:29] 2026-04-29 00:49:24,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 02:49:29] 2026-04-29 00:49:24,875 | INFO     | [monitor] control thread has ended
[2026-04-29 02:49:29] 2026-04-29 00:49:28,934 | INFO     | all workflow threads have been joined
[2026-04-29 02:49:29] 2026-04-29 00:49:28,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 02:49:29] 2026-04-29 00:49:28,935 | INFO     | traces error code: 0
[2026-04-29 02:49:29] 2026-04-29 00:49:28,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 02:49:29] 2026-04-29 00:49:29,059 [wrapper] ==== pilot stdout END ====
[2026-04-29 02:49:29] 2026-04-29 00:49:29,062 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 02:49:29] 2026-04-29 00:49:29,064 [wrapper] pilotpid: 1154898
[2026-04-29 02:49:29] 2026-04-29 00:49:29,067 [wrapper] Pilot exit status: 0
[2026-04-29 02:49:29] 2026-04-29 00:49:29,076 [wrapper] pandaids: 7116208823
[2026-04-29 02:49:29] 2026-04-29 00:49:29,142 [wrapper] cleanup supervisor_pilot 1426698 1154899
[2026-04-29 02:49:29] 2026-04-29 00:49:29,145 [wrapper] Test setup, not cleaning
[2026-04-29 02:49:29] 2026-04-29 00:49:29,148 [wrapper] apfmon messages muted
[2026-04-29 02:49:29] 2026-04-29 00:49:29,151 [wrapper] ==== wrapper stdout END ====
[2026-04-29 02:49:29] 2026-04-29 00:49:29,154 [wrapper] ==== wrapper stderr END ====
[2026-04-29 02:49:29]  *** Error codes and diagnostics ***
[2026-04-29 02:49:29]     "exeErrorCode": 0,
[2026-04-29 02:49:29]     "pilotErrorCode": 0,
[2026-04-29 02:49:29]  *** Listing of results directory ***
[2026-04-29 02:49:29] total 2471124
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc     683926 Apr 27 02:46 pilot3.tar.gz
[2026-04-29 02:49:29] -rwx------. 1 boinc boinc      36322 Apr 27 02:48 runpilot2-wrapper.sh
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc       5631 Apr 27 02:49 queuedata.json
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc        100 Apr 28 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 02:49:29] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 22:30 run_atlas
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc        105 Apr 28 22:30 job.xml
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc 2254743933 Apr 28 22:30 EVNT.49820373._000043.pool.root.1
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc       6482 Apr 28 22:30 init_data.xml
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc      15667 Apr 28 22:30 start_atlas.sh
[2026-04-29 02:49:29] drwxrwx--x. 2 boinc boinc       4096 Apr 28 22:30 shared
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc     697423 Apr 28 22:30 input.tar.gz
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc          0 Apr 28 22:30 boinc_lockfile
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc       2584 Apr 28 22:30 pandaJob.out
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc    1001831 Apr 28 22:30 agis_schedconf.cvmfs.json
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc        452 Apr 28 22:30 workernode_map.json
[2026-04-29 02:49:29] drwx------. 5 boinc boinc       4096 Apr 28 22:30 pilot3
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc  267891739 Apr 29 02:47 HITS.49820375._015918.pool.root.1
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc        489 Apr 29 02:47 boinc_task_state.xml
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc       1051 Apr 29 02:48 memory_monitor_summary.json
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc    1512704 Apr 29 02:48 agis_ddmendpoints.agis.ALL.json
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc     378103 Apr 29 02:48 log.49820375._015918.job.log.tgz.1
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc         95 Apr 29 02:48 pilot_heartbeat.json
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc       6431 Apr 29 02:48 heartbeat_new.json
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc       6322 Apr 29 02:48 heartbeat.json
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc         28 Apr 29 02:49 wrapper_checkpoint.txt
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc       8192 Apr 29 02:49 boinc_mmap_file
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc       5089 Apr 29 02:49 pilotlog.txt
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc    1447788 Apr 29 02:49 log.49820375._015918.job.log.1
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc        357 Apr 29 02:49 output.list
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc        410 Apr 29 02:49 runtime_log
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc    1843200 Apr 29 02:49 result.tar.gz
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc       8828 Apr 29 02:49 runtime_log.err
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc        664 Apr 29 02:49 b24f758421da.diag
[2026-04-29 02:49:29] -rw-r--r--. 1 boinc boinc      21031 Apr 29 02:49 stderr.txt
[2026-04-29 02:49:29] HITS file was successfully produced:
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc 267891739 Apr 29 02:47 shared/HITS.pool.root.1
[2026-04-29 02:49:29]  *** Contents of shared directory: ***
[2026-04-29 02:49:29] total 2466024
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc 2254743933 Apr 28 22:30 ATLAS.root_0
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc      15667 Apr 28 22:30 start_atlas.sh
[2026-04-29 02:49:29] -rw-r--r--. 2 boinc boinc     697423 Apr 28 22:30 input.tar.gz
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc  267891739 Apr 29 02:47 HITS.pool.root.1
[2026-04-29 02:49:29] -rw-------. 1 boinc boinc    1843200 Apr 29 02:49 result.tar.gz
02:49:31 (1150751): run_atlas exited; CPU time 60431.669114
02:49:31 (1150751): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN