Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (2814631): wrapper (7.7.26015): starting
00:03:33 (2814631): wrapper: running run_atlas (--nthreads 11)
[2026-04-28 00:03:33] Arguments: --nthreads 11
[2026-04-28 00:03:33] Threads: 11
[2026-04-28 00:03:33] Checking for CVMFS
[2026-04-28 00:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 00:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 00:03:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 00:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 00:03:36] 2.13.3.0 13170 726 99860 158952 2 121 40280475 40960001 27379 16776704 0 2569117 99.731 1712656 32266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-28 00:03:36] CVMFS is ok
[2026-04-28 00:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 00:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 00:03:36] Further information can be found at the LHC@home message board.
[2026-04-28 00:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 00:03:36] Checking for apptainer binary...
[2026-04-28 00:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 00:03:36] Running /usr/bin/apptainer --version
[2026-04-28 00:03:36] apptainer version 1.4.5-3.el9
[2026-04-28 00:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 00:03:36] c6-8-12-2.aglt2.org
[2026-04-28 00:03:36] apptainer works
[2026-04-28 00:03:36] Set ATHENA_PROC_NUMBER=11
[2026-04-28 00:03:36] Set ATHENA_CORE_NUMBER=11
[2026-04-28 00:03:37] Starting ATLAS job with PandaID=7116259463
[2026-04-28 00:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 11:41:07]  *** The last 200 lines of the pilot log: ***
[2026-04-28 11:41:07] 2026-04-28 15:40:08,373 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-28 11:41:07] 2026-04-28 15:40:08,409 | INFO     | this job has now completed (state=finished)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,410 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,410 | INFO     | log transfer has been attempted: DONE
[2026-04-28 11:41:07] 2026-04-28 15:40:08,410 | INFO     | job 7116259463 has finished - writing final server update
[2026-04-28 11:41:07] 2026-04-28 15:40:08,410 | INFO     | total number of processed events: 400 (read)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,441 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7116259463/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,442 | INFO     | extracted standard info from prmon json
[2026-04-28 11:41:07] 2026-04-28 15:40:08,442 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 11:41:07] 2026-04-28 15:40:08,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 11:41:07] 2026-04-28 15:40:08,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 11:41:07] 2026-04-28 15:40:08,451 | INFO     | fitting pss+swap vs Time
[2026-04-28 11:41:07] 2026-04-28 15:40:08,452 | INFO     | sum of square deviations: 97928309810.24979
[2026-04-28 11:41:07] 2026-04-28 15:40:08,466 | INFO     | sum of deviations: 283065272795.0648
[2026-04-28 11:41:07] 2026-04-28 15:40:08,466 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,466 | INFO     | mean y: 2616377.7958883992
[2026-04-28 11:41:07] 2026-04-28 15:40:08,466 | INFO     | intersect: 2616377.7958883992
[2026-04-28 11:41:07] 2026-04-28 15:40:08,467 | INFO     | chi2: 7.839709720256344
[2026-04-28 11:41:07] 2026-04-28 15:40:08,468 | INFO     | sum of square deviations: 95787076220.11082
[2026-04-28 11:41:07] 2026-04-28 15:40:08,475 | INFO     | sum of deviations: 467962866751.0636
[2026-04-28 11:41:07] 2026-04-28 15:40:08,476 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,476 | INFO     | mean y: 2629527.8091715975
[2026-04-28 11:41:07] 2026-04-28 15:40:08,476 | INFO     | intersect: 2629527.8091715975
[2026-04-28 11:41:07] 2026-04-28 15:40:08,477 | INFO     | chi2: 4.909765795603317
[2026-04-28 11:41:07] 2026-04-28 15:40:08,477 | INFO     | current chi2=4.909765795603317 (change=37.37311749034024 %)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,477 | INFO     | sum of square deviations: 93677285079.97008
[2026-04-28 11:41:07] 2026-04-28 15:40:08,485 | INFO     | sum of deviations: 463675690830.9149
[2026-04-28 11:41:07] 2026-04-28 15:40:08,485 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,485 | INFO     | mean y: 2629217.9299552906
[2026-04-28 11:41:07] 2026-04-28 15:40:08,485 | INFO     | intersect: 2629217.9299552906
[2026-04-28 11:41:07] 2026-04-28 15:40:08,486 | INFO     | chi2: 4.910204755821575
[2026-04-28 11:41:07] 2026-04-28 15:40:08,486 | INFO     | current chi2=4.910204755821575 (change=-0.00894055310442118 %)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,487 | INFO     | right removable region: 670
[2026-04-28 11:41:07] 2026-04-28 15:40:08,487 | INFO     | sum of square deviations: 95787007290.11086
[2026-04-28 11:41:07] 2026-04-28 15:40:08,495 | INFO     | sum of deviations: 58391328055.73677
[2026-04-28 11:41:07] 2026-04-28 15:40:08,495 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,495 | INFO     | mean y: 2632366.7899408285
[2026-04-28 11:41:07] 2026-04-28 15:40:08,495 | INFO     | intersect: 2632366.7899408285
[2026-04-28 11:41:07] 2026-04-28 15:40:08,496 | INFO     | chi2: 4.24553750610609
[2026-04-28 11:41:07] 2026-04-28 15:40:08,496 | INFO     | current chi2=4.24553750610609 (change=45.84573080382792 %)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,497 | INFO     | sum of square deviations: 93677188333.30495
[2026-04-28 11:41:07] 2026-04-28 15:40:08,505 | INFO     | sum of deviations: -43359962770.69005
[2026-04-28 11:41:07] 2026-04-28 15:40:08,505 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,505 | INFO     | mean y: 2639712.1400894187
[2026-04-28 11:41:07] 2026-04-28 15:40:08,506 | INFO     | intersect: 2639712.1400894187
[2026-04-28 11:41:07] 2026-04-28 15:40:08,506 | INFO     | chi2: 3.4719151923563745
[2026-04-28 11:41:07] 2026-04-28 15:40:08,507 | INFO     | current chi2=3.4719151923563745 (change=18.2220110560103 %)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,508 | INFO     | left removable region: 10
[2026-04-28 11:41:07] 2026-04-28 15:40:08,508 | INFO     | sum of square deviations: 89145178509.99397
[2026-04-28 11:41:07] 2026-04-28 15:40:08,516 | INFO     | sum of deviations: 139036232406.6394
[2026-04-28 11:41:07] 2026-04-28 15:40:08,516 | INFO     | mean x (centered): 0.0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,516 | INFO     | mean y: 2653072.346969697
[2026-04-28 11:41:07] 2026-04-28 15:40:08,516 | INFO     | intersect: 2653072.346969697
[2026-04-28 11:41:07] 2026-04-28 15:40:08,517 | INFO     | chi2: 0.4791706712310346
[2026-04-28 11:41:07] 2026-04-28 15:40:08,517 | INFO     | current memory leak: 1.56 B/s (using 660 data points, chi2=0.48)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | could have reported an average CPU frequency of 3241 MHz (27 samples)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | ..............................
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | . Timing measurements:
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | . get job = 1 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | . initial setup = 45 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,518 | INFO     | . payload setup = 97 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,519 | INFO     | . stage-in = 0 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,519 | INFO     | . payload execution = 41540 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,519 | INFO     | . stage-out = 4 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,519 | INFO     | . log creation = 0 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,519 | INFO     | ..............................
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | 
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | job summary report
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | --------------------------------------------------
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | PanDA job id: 7116259463
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | task id: 49263191
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | errors: (none)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 11:41:07] 2026-04-28 15:40:08,600 | INFO     | pilot state: finished 
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | transexitcode: 0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | exeerrorcode: 0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | exeerrordiag: 
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | exitcode: 0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | exitmsg: OK
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | cpuconsumptiontime: 42123 s
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | nevents: 400
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | neventsw: 0
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | pid: 2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | pgrp: 2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | corecount: 11
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | event service: False
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | sizes: {0: 2280709, 1: 2280709, 2: 2261570, 3: 2282566, 14: 2282594, 41641: 2326812, 41642: 2326939, 41647: 2336049, 41648: 2336187}
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | --------------------------------------------------
[2026-04-28 11:41:07] 2026-04-28 15:40:08,601 | INFO     | 
[2026-04-28 11:41:07] 2026-04-28 15:40:08,602 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | job 7116259463 has completed (purged errors)
[2026-04-28 11:41:07] 2026-04-28 15:40:08,747 | INFO     | overall cleanup function is called
[2026-04-28 11:41:07] 2026-04-28 15:40:09,758 | INFO     | --- collectZombieJob: --- 10, [2859815]
[2026-04-28 11:41:07] 2026-04-28 15:40:09,759 | INFO     | zombie collector waiting for pid 2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:09,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 11:41:07] 2026-04-28 15:40:09,759 | INFO     | collected zombie processes
[2026-04-28 11:41:07] 2026-04-28 15:40:09,760 | INFO     | will attempt to kill all subprocesses of pid=2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:10,844 | INFO     | process IDs to be killed: [2859815] (in reverse order)
[2026-04-28 11:41:07] 2026-04-28 15:40:13,001 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 11:41:07] 2026-04-28 15:40:13,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 11:41:07] 2026-04-28 15:40:13,081 | INFO     | did not find any defunct processes belonging to 2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:13,105 | INFO     | did not find any defunct processes belonging to 2859815
[2026-04-28 11:41:07] 2026-04-28 15:40:13,106 | INFO     | Ready for new job
[2026-04-28 11:41:07] 2026-04-28 15:40:13,109 | INFO     | ***************************************
[2026-04-28 11:41:07] 2026-04-28 15:40:13,109 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 11:41:07] 2026-04-28 15:40:13,109 | INFO     | ***************************************
[2026-04-28 11:41:07] 2026-04-28 15:40:13,109 | INFO     | 
[2026-04-28 11:41:07] 2026-04-28 15:40:13,112 | INFO     | architecture information:
[2026-04-28 11:41:07] 2026-04-28 15:40:13,113 | INFO     | executing command: cat /etc/os-release
[2026-04-28 11:41:07] 2026-04-28 15:40:13,161 | INFO     | cat /etc/os-release:
[2026-04-28 11:41:07] NAME="CentOS Linux"
[2026-04-28 11:41:07] VERSION="7 (Core)"
[2026-04-28 11:41:07] ID="centos"
[2026-04-28 11:41:07] ID_LIKE="rhel fedora"
[2026-04-28 11:41:07] VERSION_ID="7"
[2026-04-28 11:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 11:41:07] ANSI_COLOR="0;31"
[2026-04-28 11:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 11:41:07] HOME_URL="https://www.centos.org/"
[2026-04-28 11:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 11:41:07] 
[2026-04-28 11:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 11:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 11:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 11:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 11:41:07] 
[2026-04-28 11:41:07] 2026-04-28 15:40:13,161 | INFO     | ***************************************
[2026-04-28 11:41:07] 2026-04-28 15:40:13,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-28 11:41:07] 2026-04-28 15:40:13,797 | INFO     | sufficient remaining disk space (63943213056 B)
[2026-04-28 11:41:07] 2026-04-28 15:40:13,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 11:41:07] 2026-04-28 15:40:13,802 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 11:41:07] 2026-04-28 15:40:13,802 | INFO     | update_server=False
[2026-04-28 11:41:07] 2026-04-28 15:40:13,802 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 11:41:07] 2026-04-28 15:40:13,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 11:41:07] 2026-04-28 15:40:13,803 | INFO     | aborting loop
[2026-04-28 11:41:07] 2026-04-28 15:40:13,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 11:41:07] 2026-04-28 15:40:13,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 11:41:07] 2026-04-28 15:40:13,969 | INFO     | all data control threads have been joined
[2026-04-28 11:41:07] 2026-04-28 15:40:14,649 | INFO     | all payload control threads have been joined
[2026-04-28 11:41:07] 2026-04-28 15:40:14,808 | INFO     | [job] retrieve thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,818 | INFO     | [job] queue monitor thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,828 | INFO     | [job] job monitor thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,881 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,887 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 11:41:07] 2026-04-28 15:40:14,976 | INFO     | [data] control thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:14,996 | INFO     | [payload] failed_post thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:15,083 | INFO     | [data] copytool_in thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:15,089 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:15,523 | INFO     | all job control threads have been joined
[2026-04-28 11:41:07] 2026-04-28 15:40:15,655 | INFO     | [payload] control thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:15,817 | INFO     | [payload] validate_post thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:15,962 | INFO     | [job] validate thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:16,241 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:16,530 | INFO     | [job] control thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:16,958 | INFO     | [data] copytool_out thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:17,812 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 11:41:07] 2026-04-28 15:40:41,948 | INFO     | PID=2830555 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 11:41:07] 2026-04-28 15:40:41,948 | INFO     | .. there are 38 such processes running
[2026-04-28 11:41:07] 2026-04-28 15:40:41,982 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 11:41:07] 2026-04-28 15:40:41,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 11:41:07] 2026-04-28 15:40:41,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 11:41:07] 2026-04-28 15:40:58,810 | INFO     | [monitor] cgroup control has ended
[2026-04-28 11:41:07] 2026-04-28 15:41:00,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686636382016)>', '<ExcThread(monitor, started 139685548517120)>']
[2026-04-28 11:41:07] 2026-04-28 15:41:01,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 11:41:07] 2026-04-28 15:41:01,102 | INFO     | [monitor] control thread has ended
[2026-04-28 11:41:07] 2026-04-28 15:41:05,653 | INFO     | all workflow threads have been joined
[2026-04-28 11:41:07] 2026-04-28 15:41:05,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 11:41:07] 2026-04-28 15:41:05,654 | INFO     | traces error code: 0
[2026-04-28 11:41:07] 2026-04-28 15:41:05,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 11:41:07] 2026-04-28 15:41:05,858 [wrapper] ==== pilot stdout END ====
[2026-04-28 11:41:07] 2026-04-28 15:41:05,903 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 11:41:07] 2026-04-28 15:41:05,916 [wrapper] pilotpid: 2830555
[2026-04-28 11:41:07] 2026-04-28 15:41:05,946 [wrapper] Pilot exit status: 0
[2026-04-28 11:41:07] 2026-04-28 15:41:06,137 [wrapper] pandaids: 7116259463
[2026-04-28 11:41:07] 2026-04-28 15:41:07,021 [wrapper] cleanup supervisor_pilot 1518064 2830556
[2026-04-28 11:41:07] 2026-04-28 15:41:07,043 [wrapper] Test setup, not cleaning
[2026-04-28 11:41:07] 2026-04-28 15:41:07,058 [wrapper] apfmon messages muted
[2026-04-28 11:41:07] 2026-04-28 15:41:07,105 [wrapper] ==== wrapper stdout END ====
[2026-04-28 11:41:07] 2026-04-28 15:41:07,122 [wrapper] ==== wrapper stderr END ====
[2026-04-28 11:41:07]  *** Error codes and diagnostics ***
[2026-04-28 11:41:07]     "exeErrorCode": 0,
[2026-04-28 11:41:07]     "pilotErrorCode": 0,
[2026-04-28 11:41:07]  *** Listing of results directory ***
[2026-04-28 11:41:07] total 432644
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas    683926 Apr 27 20:34 pilot3.tar.gz
[2026-04-28 11:41:07] -rwx------. 1 boincer umatlas     36322 Apr 27 20:37 runpilot2-wrapper.sh
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas      5631 Apr 27 20:38 queuedata.json
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas       100 Apr 28 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 11:41:07] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 28 00:03 run_atlas
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas       105 Apr 28 00:03 job.xml
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas 224488674 Apr 28 00:03 EVNT.49263189._000695.pool.root.1
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 00:03 start_atlas.sh
[2026-04-28 11:41:07] drwxrwx--x. 2 boincer umatlas      4096 Apr 28 00:03 shared
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas    697425 Apr 28 00:03 input.tar.gz
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas         0 Apr 28 00:03 boinc_lockfile
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas      2575 Apr 28 00:03 pandaJob.out
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas        57 Apr 28 00:03 setup.sh.local
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas    996684 Apr 28 00:05 agis_schedconf.cvmfs.json
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas       442 Apr 28 00:05 workernode_map.json
[2026-04-28 11:41:07] drwx------. 5 boincer umatlas      4096 Apr 28 00:05 pilot3
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas 205988888 Apr 28 11:35 HITS.49263191._080805.pool.root.1
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas       489 Apr 28 11:36 boinc_task_state.xml
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas      6755 Apr 28 11:39 init_data.xml
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas      1045 Apr 28 11:39 memory_monitor_summary.json
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas   1512704 Apr 28 11:40 agis_ddmendpoints.agis.ALL.json
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas    689193 Apr 28 11:40 log.49263191._080805.job.log.tgz.1
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas      6419 Apr 28 11:40 heartbeat_new.json
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas      6310 Apr 28 11:40 heartbeat.json
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas        95 Apr 28 11:40 pilot_heartbeat.json
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas        28 Apr 28 11:41 wrapper_checkpoint.txt
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas      4823 Apr 28 11:41 pilotlog.txt
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas      8192 Apr 28 11:41 boinc_mmap_file
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas   3516272 Apr 28 11:41 log.49263191._080805.job.log.1
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas       357 Apr 28 11:41 output.list
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas       410 Apr 28 11:41 runtime_log
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas   4218880 Apr 28 11:41 result.tar.gz
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas      8972 Apr 28 11:41 runtime_log.err
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas       659 Apr 28 11:41 015d5e21972f.diag
[2026-04-28 11:41:07] -rw-r--r--. 1 boincer umatlas     21067 Apr 28 11:41 stderr.txt
[2026-04-28 11:41:07] HITS file was successfully produced:
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas 205988888 Apr 28 11:35 shared/HITS.pool.root.1
[2026-04-28 11:41:07]  *** Contents of shared directory: ***
[2026-04-28 11:41:07] total 425220
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas 224488674 Apr 28 00:03 ATLAS.root_0
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas     15667 Apr 28 00:03 start_atlas.sh
[2026-04-28 11:41:07] -rw-r--r--. 2 boincer umatlas    697425 Apr 28 00:03 input.tar.gz
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas 205988888 Apr 28 11:35 HITS.pool.root.1
[2026-04-28 11:41:07] -rw-------. 1 boincer umatlas   4218880 Apr 28 11:41 result.tar.gz
11:41:09 (2814631): run_atlas exited; CPU time 43574.407841
11:41:09 (2814631): called boinc_finish(0)

</stderr_txt>
]]>

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