Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:26 (2708887): wrapper (7.7.26015): starting
14:44:26 (2708887): wrapper: running run_atlas (--nthreads 10)
[2026-04-28 14:44:26] Arguments: --nthreads 10
[2026-04-28 14:44:26] Threads: 10
[2026-04-28 14:44:26] Checking for CVMFS
[2026-04-28 14:44:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 14:44:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 14:44:28] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 14:44:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 14:44:29] 2.13.3.0 15513 250694 885168 158977 2 440 31115135 40960000 36532 16776704 0 2055366295 99.830 908404281 29937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-28 14:44:29] CVMFS is ok
[2026-04-28 14:44:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 14:44:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 14:44:29] Further information can be found at the LHC@home message board.
[2026-04-28 14:44:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 14:44:29] Checking for apptainer binary...
[2026-04-28 14:44:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 14:44:29] Running /usr/bin/apptainer --version
[2026-04-28 14:44:29] apptainer version 1.4.5-3.el9
[2026-04-28 14:44:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 14:44:30] c-1-1.aglt2.org
[2026-04-28 14:44:30] apptainer works
[2026-04-28 14:44:30] Set ATHENA_PROC_NUMBER=10
[2026-04-28 14:44:30] Set ATHENA_CORE_NUMBER=10
[2026-04-28 14:44:30] Starting ATLAS job with PandaID=7116365243
[2026-04-28 14:44:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 23:52:12]  *** The last 200 lines of the pilot log: ***
[2026-04-28 23:52:12] 2026-04-29 03:51:00,724 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,724 | INFO     | log transfer has been attempted: DONE
[2026-04-28 23:52:12] 2026-04-29 03:51:00,725 | INFO     | job 7116365243 has finished - writing final server update
[2026-04-28 23:52:12] 2026-04-29 03:51:00,725 | INFO     | total number of processed events: 400 (read)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,788 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7116365243/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,788 | INFO     | extracted standard info from prmon json
[2026-04-28 23:52:12] 2026-04-29 03:51:00,788 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 23:52:12] 2026-04-29 03:51:00,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 23:52:12] 2026-04-29 03:51:00,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 23:52:12] 2026-04-29 03:51:00,841 | INFO     | fitting pss+swap vs Time
[2026-04-28 23:52:12] 2026-04-29 03:51:00,842 | INFO     | sum of square deviations: 47483140422.628296
[2026-04-28 23:52:12] 2026-04-29 03:51:00,909 | INFO     | sum of deviations: 178642451385.43344
[2026-04-28 23:52:12] 2026-04-29 03:51:00,910 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,910 | INFO     | mean y: 2648353.385046729
[2026-04-28 23:52:12] 2026-04-29 03:51:00,910 | INFO     | intersect: 2648353.385046729
[2026-04-28 23:52:12] 2026-04-29 03:51:00,911 | INFO     | chi2: 4.721055873517793
[2026-04-28 23:52:12] 2026-04-29 03:51:00,911 | INFO     | sum of square deviations: 46164315389.08678
[2026-04-28 23:52:12] 2026-04-29 03:51:00,930 | INFO     | sum of deviations: 255666517175.89444
[2026-04-28 23:52:12] 2026-04-29 03:51:00,931 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,931 | INFO     | mean y: 2657207.767924528
[2026-04-28 23:52:12] 2026-04-29 03:51:00,931 | INFO     | intersect: 2657207.767924528
[2026-04-28 23:52:12] 2026-04-29 03:51:00,932 | INFO     | chi2: 3.047512216122957
[2026-04-28 23:52:12] 2026-04-29 03:51:00,932 | INFO     | current chi2=3.047512216122957 (change=35.44850351766396 %)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,933 | INFO     | sum of square deviations: 44870141980.525505
[2026-04-28 23:52:12] 2026-04-29 03:51:00,940 | INFO     | sum of deviations: 251893188681.69138
[2026-04-28 23:52:12] 2026-04-29 03:51:00,940 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,940 | INFO     | mean y: 2656763.1123809526
[2026-04-28 23:52:12] 2026-04-29 03:51:00,940 | INFO     | intersect: 2656763.1123809526
[2026-04-28 23:52:12] 2026-04-29 03:51:00,942 | INFO     | chi2: 3.0479319360440447
[2026-04-28 23:52:12] 2026-04-29 03:51:00,942 | INFO     | current chi2=3.0479319360440447 (change=-0.01377254269456375 %)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,942 | INFO     | right removable region: 524
[2026-04-28 23:52:12] 2026-04-29 03:51:00,943 | INFO     | sum of square deviations: 46164167159.08679
[2026-04-28 23:52:12] 2026-04-29 03:51:00,950 | INFO     | sum of deviations: 23660806049.305733
[2026-04-28 23:52:12] 2026-04-29 03:51:00,951 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,951 | INFO     | mean y: 2666248.3320754715
[2026-04-28 23:52:12] 2026-04-29 03:51:00,951 | INFO     | intersect: 2666248.3320754715
[2026-04-28 23:52:12] 2026-04-29 03:51:00,952 | INFO     | chi2: 1.9499974313896158
[2026-04-28 23:52:12] 2026-04-29 03:51:00,952 | INFO     | current chi2=1.9499974313896158 (change=58.695734945059705 %)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,953 | INFO     | sum of square deviations: 44869877850.44962
[2026-04-28 23:52:12] 2026-04-29 03:51:00,960 | INFO     | sum of deviations: -11733941789.518082
[2026-04-28 23:52:12] 2026-04-29 03:51:00,960 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,960 | INFO     | mean y: 2670410.316190476
[2026-04-28 23:52:12] 2026-04-29 03:51:00,961 | INFO     | intersect: 2670410.316190476
[2026-04-28 23:52:12] 2026-04-29 03:51:00,983 | INFO     | chi2: 1.8014964250501846
[2026-04-28 23:52:12] 2026-04-29 03:51:00,984 | INFO     | current chi2=1.8014964250501846 (change=7.615446253875614 %)
[2026-04-28 23:52:12] 2026-04-29 03:51:00,984 | INFO     | left removable region: 10
[2026-04-28 23:52:12] 2026-04-29 03:51:00,985 | INFO     | sum of square deviations: 42108291917.502174
[2026-04-28 23:52:12] 2026-04-29 03:51:00,997 | INFO     | sum of deviations: 63316375521.038826
[2026-04-28 23:52:12] 2026-04-29 03:51:00,997 | INFO     | mean x (centered): 0.0
[2026-04-28 23:52:12] 2026-04-29 03:51:00,998 | INFO     | mean y: 2679363.8774319068
[2026-04-28 23:52:12] 2026-04-29 03:51:00,998 | INFO     | intersect: 2679363.8774319068
[2026-04-28 23:52:12] 2026-04-29 03:51:00,998 | INFO     | chi2: 0.0953316909765816
[2026-04-28 23:52:12] 2026-04-29 03:51:00,999 | INFO     | current memory leak: 1.50 B/s (using 514 data points, chi2=0.10)
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | could have reported an average CPU frequency of 2780 MHz (22 samples)
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | ..............................
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . Timing measurements:
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . get job = 0 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . initial setup = 27 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . payload setup = 55 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . stage-in = 0 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . payload execution = 32612 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,000 | INFO     | . stage-out = 6 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,001 | INFO     | . log creation = 1 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,001 | INFO     | ..............................
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | 
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | job summary report
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | --------------------------------------------------
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | PanDA job id: 7116365243
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | task id: 49820244
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | errors: (none)
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 23:52:12] 2026-04-29 03:51:01,136 | INFO     | pilot state: finished 
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | transexitcode: 0
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | exeerrorcode: 0
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | exeerrordiag: 
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | exitcode: 0
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | exitmsg: OK
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | cpuconsumptiontime: 77512 s
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | nevents: 400
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | neventsw: 0
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | pid: 2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | pgrp: 2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | corecount: 10
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | event service: False
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | sizes: {0: 2280624, 1: 2280680, 2: 2280736, 3: 2282565, 14: 2282565, 32672: 2321403, 32673: 2321530, 32679: 2330584, 32681: 2330640, 32684: 2330834}
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | --------------------------------------------------
[2026-04-28 23:52:12] 2026-04-29 03:51:01,137 | INFO     | 
[2026-04-28 23:52:12] 2026-04-29 03:51:01,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-28 23:52:12] 2026-04-29 03:51:01,163 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,164 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 23:52:12] 2026-04-29 03:51:01,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 23:52:12] 2026-04-29 03:51:01,165 | INFO     | job 7116365243 has completed (purged errors)
[2026-04-28 23:52:12] 2026-04-29 03:51:01,165 | INFO     | overall cleanup function is called
[2026-04-28 23:52:12] 2026-04-29 03:51:02,198 | INFO     | --- collectZombieJob: --- 10, [2744808]
[2026-04-28 23:52:12] 2026-04-29 03:51:02,198 | INFO     | zombie collector waiting for pid 2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:02,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 23:52:12] 2026-04-29 03:51:02,198 | INFO     | collected zombie processes
[2026-04-28 23:52:12] 2026-04-29 03:51:02,198 | INFO     | will attempt to kill all subprocesses of pid=2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:04,384 | INFO     | process IDs to be killed: [2744808] (in reverse order)
[2026-04-28 23:52:12] 2026-04-29 03:51:04,626 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 23:52:12] 2026-04-29 03:51:04,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 23:52:12] 2026-04-29 03:51:04,840 | INFO     | did not find any defunct processes belonging to 2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:04,926 | INFO     | did not find any defunct processes belonging to 2744808
[2026-04-28 23:52:12] 2026-04-29 03:51:04,929 | INFO     | Ready for new job
[2026-04-28 23:52:12] 2026-04-29 03:51:04,951 | INFO     | ***************************************
[2026-04-28 23:52:12] 2026-04-29 03:51:04,951 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 23:52:12] 2026-04-29 03:51:04,951 | INFO     | ***************************************
[2026-04-28 23:52:12] 2026-04-29 03:51:04,951 | INFO     | 
[2026-04-28 23:52:12] 2026-04-29 03:51:04,996 | INFO     | architecture information:
[2026-04-28 23:52:12] 2026-04-29 03:51:04,996 | INFO     | executing command: cat /etc/os-release
[2026-04-28 23:52:12] 2026-04-29 03:51:05,078 | INFO     | cat /etc/os-release:
[2026-04-28 23:52:12] NAME="CentOS Linux"
[2026-04-28 23:52:12] VERSION="7 (Core)"
[2026-04-28 23:52:12] ID="centos"
[2026-04-28 23:52:12] ID_LIKE="rhel fedora"
[2026-04-28 23:52:12] VERSION_ID="7"
[2026-04-28 23:52:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 23:52:12] ANSI_COLOR="0;31"
[2026-04-28 23:52:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 23:52:12] HOME_URL="https://www.centos.org/"
[2026-04-28 23:52:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 23:52:12] 
[2026-04-28 23:52:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 23:52:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 23:52:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 23:52:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 23:52:12] 
[2026-04-28 23:52:12] 2026-04-29 03:51:05,079 | INFO     | ***************************************
[2026-04-28 23:52:12] 2026-04-29 03:51:05,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-28 23:52:12] 2026-04-29 03:51:05,732 | INFO     | sufficient remaining disk space (101599674368 B)
[2026-04-28 23:52:12] 2026-04-29 03:51:05,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 23:52:12] 2026-04-29 03:51:05,776 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 23:52:12] 2026-04-29 03:51:05,776 | INFO     | update_server=False
[2026-04-28 23:52:12] 2026-04-29 03:51:05,776 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 23:52:12] 2026-04-29 03:51:05,833 | INFO     | all data control threads have been joined
[2026-04-28 23:52:12] 2026-04-29 03:51:05,892 | INFO     | all job control threads have been joined
[2026-04-28 23:52:12] 2026-04-29 03:51:05,945 | INFO     | all payload control threads have been joined
[2026-04-28 23:52:12] 2026-04-29 03:51:06,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 23:52:12] 2026-04-29 03:51:06,128 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 23:52:12] 2026-04-29 03:51:06,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 23:52:12] 2026-04-29 03:51:06,128 | INFO     | will abort loop
[2026-04-28 23:52:12] 2026-04-29 03:51:06,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 23:52:12] 2026-04-29 03:51:06,791 | INFO     | [job] retrieve thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:06,842 | INFO     | [data] control thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:06,898 | INFO     | [job] control thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:06,951 | INFO     | [payload] control thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 23:52:12] 2026-04-29 03:51:07,127 | INFO     | [payload] failed_post thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,136 | INFO     | [job] job monitor thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,174 | INFO     | [job] queue monitor thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,182 | INFO     | [payload] validate_post thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,348 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,640 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,690 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,906 | INFO     | [data] copytool_in thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:07,925 | INFO     | [job] validate thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:08,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 23:52:12] 2026-04-29 03:51:09,067 | INFO     | [data] copytool_out thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:12,831 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 23:52:12] 2026-04-29 03:51:36,401 | INFO     | PID=2720460 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 23:52:12] 2026-04-29 03:51:36,403 | INFO     | .. there are 64 such processes running
[2026-04-28 23:52:12] 2026-04-29 03:51:36,404 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 23:52:12] 2026-04-29 03:51:36,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 23:52:12] 2026-04-29 03:51:36,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 23:52:12] 2026-04-29 03:52:05,361 | INFO     | [monitor] cgroup control has ended
[2026-04-28 23:52:12] 2026-04-29 03:52:05,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643238438720)>', '<ExcThread(monitor, started 139642506557184)>']
[2026-04-28 23:52:12] 2026-04-29 03:52:06,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 23:52:12] 2026-04-29 03:52:06,623 | INFO     | [monitor] control thread has ended
[2026-04-28 23:52:12] 2026-04-29 03:52:10,905 | INFO     | all workflow threads have been joined
[2026-04-28 23:52:12] 2026-04-29 03:52:10,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 23:52:12] 2026-04-29 03:52:10,905 | INFO     | traces error code: 0
[2026-04-28 23:52:12] 2026-04-29 03:52:10,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 23:52:12] 2026-04-29 03:52:11,340 [wrapper] ==== pilot stdout END ====
[2026-04-28 23:52:12] 2026-04-29 03:52:11,368 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 23:52:12] 2026-04-29 03:52:11,380 [wrapper] pilotpid: 2720460
[2026-04-28 23:52:12] 2026-04-29 03:52:11,406 [wrapper] Pilot exit status: 0
[2026-04-28 23:52:12] 2026-04-29 03:52:11,471 [wrapper] pandaids: 7116365243
[2026-04-28 23:52:12] 2026-04-29 03:52:11,717 [wrapper] cleanup supervisor_pilot 2509231 2720461
[2026-04-28 23:52:12] 2026-04-29 03:52:11,755 [wrapper] Test setup, not cleaning
[2026-04-28 23:52:12] 2026-04-29 03:52:11,799 [wrapper] apfmon messages muted
[2026-04-28 23:52:12] 2026-04-29 03:52:11,821 [wrapper] ==== wrapper stdout END ====
[2026-04-28 23:52:12] 2026-04-29 03:52:11,855 [wrapper] ==== wrapper stderr END ====
[2026-04-28 23:52:12]  *** Error codes and diagnostics ***
[2026-04-28 23:52:12]     "exeErrorCode": 0,
[2026-04-28 23:52:12]     "pilotErrorCode": 0,
[2026-04-28 23:52:12]  *** Listing of results directory ***
[2026-04-28 23:52:12] total 2451004
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas     683926 Apr 27 23:00 pilot3.tar.gz
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas       5631 Apr 27 23:38 queuedata.json
[2026-04-28 23:52:12] -rwx------. 1 boincer umatlas      36322 Apr 27 23:38 runpilot2-wrapper.sh
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas        100 Apr 28 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 23:52:12] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 28 14:44 run_atlas
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas        105 Apr 28 14:44 job.xml
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas 2225736027 Apr 28 14:44 EVNT.49820242._000071.pool.root.1
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 14:44 start_atlas.sh
[2026-04-28 23:52:12] drwxrwx--x. 2 boincer umatlas       4096 Apr 28 14:44 shared
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas     697408 Apr 28 14:44 input.tar.gz
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas          0 Apr 28 14:44 boinc_lockfile
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas       2551 Apr 28 14:44 pandaJob.out
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas         57 Apr 28 14:44 setup.sh.local
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas    1001831 Apr 28 14:45 agis_schedconf.cvmfs.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas        432 Apr 28 14:46 workernode_map.json
[2026-04-28 23:52:12] drwx------. 5 boincer umatlas       4096 Apr 28 14:46 pilot3
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas       6757 Apr 28 23:48 init_data.xml
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas  273733738 Apr 28 23:49 HITS.49820244._024915.pool.root.1
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas        490 Apr 28 23:49 boinc_task_state.xml
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas       1044 Apr 28 23:50 memory_monitor_summary.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas         95 Apr 28 23:50 pilot_heartbeat.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas    1512704 Apr 28 23:50 agis_ddmendpoints.agis.ALL.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas     716179 Apr 28 23:50 log.49820244._024915.job.log.tgz.1
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas       6399 Apr 28 23:51 heartbeat_new.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas       6290 Apr 28 23:51 heartbeat.json
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas       5010 Apr 28 23:52 pilotlog.txt
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas       8192 Apr 28 23:52 boinc_mmap_file
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas         28 Apr 28 23:52 wrapper_checkpoint.txt
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas    2390318 Apr 28 23:52 log.49820244._024915.job.log.1
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas        357 Apr 28 23:52 output.list
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas        410 Apr 28 23:52 runtime_log
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas    3123200 Apr 28 23:52 result.tar.gz
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas       8952 Apr 28 23:52 runtime_log.err
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas        655 Apr 28 23:52 2bcbb583bce3.diag
[2026-04-28 23:52:12] -rw-r--r--. 1 boincer umatlas      21092 Apr 28 23:52 stderr.txt
[2026-04-28 23:52:12] HITS file was successfully produced:
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas 273733738 Apr 28 23:49 shared/HITS.pool.root.1
[2026-04-28 23:52:12]  *** Contents of shared directory: ***
[2026-04-28 23:52:12] total 2444652
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas 2225736027 Apr 28 14:44 ATLAS.root_0
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas      15667 Apr 28 14:44 start_atlas.sh
[2026-04-28 23:52:12] -rw-r--r--. 2 boincer umatlas     697408 Apr 28 14:44 input.tar.gz
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas  273733738 Apr 28 23:49 HITS.pool.root.1
[2026-04-28 23:52:12] -rw-------. 1 boincer umatlas    3123200 Apr 28 23:52 result.tar.gz
23:52:14 (2708887): run_atlas exited; CPU time 79043.360775
23:52:14 (2708887): called boinc_finish(0)

</stderr_txt>
]]>

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