Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:29:06 (3634222): wrapper (7.7.26015): starting
22:29:06 (3634222): wrapper: running run_atlas (--nthreads 9)
[2026-04-27 22:29:06] Arguments: --nthreads 9
[2026-04-27 22:29:06] Threads: 9
[2026-04-27 22:29:06] Checking for CVMFS
[2026-04-27 22:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 22:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 22:29:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 22:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 22:29:07] 2.13.3.0 12357 249724 231604 158950 0 411 28157703 32503808 31609 16776704 1 3437560709 99.665 2956792448 44549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-27 22:29:07] CVMFS is ok
[2026-04-27 22:29:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 22:29:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 22:29:07] Further information can be found at the LHC@home message board.
[2026-04-27 22:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 22:29:07] Checking for apptainer binary...
[2026-04-27 22:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 22:29:07] Running /usr/bin/apptainer --version
[2026-04-27 22:29:07] apptainer version 1.4.5-3.el9
[2026-04-27 22:29:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 22:29:07] c8-7-2.aglt2.org
[2026-04-27 22:29:07] apptainer works
[2026-04-27 22:29:07] Set ATHENA_PROC_NUMBER=9
[2026-04-27 22:29:07] Set ATHENA_CORE_NUMBER=9
[2026-04-27 22:29:08] Starting ATLAS job with PandaID=7116329102
[2026-04-27 22:29:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 23:43:05]  *** The last 200 lines of the pilot log: ***
[2026-04-27 23:43:05]  direct_access_lan=False
[2026-04-27 23:43:05]  direct_access_wan=False
[2026-04-27 23:43:05]  domain=
[2026-04-27 23:43:05]  filesize=306254
[2026-04-27 23:43:05]  filetype=log
[2026-04-27 23:43:05]  guid=e45fc27e-1f14-49cd-a0c6-bd8d4adc209d
[2026-04-27 23:43:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 23:43:05]  is_altstaged=None
[2026-04-27 23:43:05]  is_tar=False
[2026-04-27 23:43:05]  lfn=log.49863714._003529.job.log.tgz.1
[2026-04-27 23:43:05]  mtime=0
[2026-04-27 23:43:05]  protocol_id=None
[2026-04-27 23:43:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 23:43:05]  replicas=None
[2026-04-27 23:43:05]  scope=mc23_13p6TeV
[2026-04-27 23:43:05]  status=None
[2026-04-27 23:43:05]  status_code=0
[2026-04-27 23:43:05]  storage_token=
[2026-04-27 23:43:05]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7116329102/log.49863714._003529.job.log.tgz.1
[2026-04-27 23:43:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ab/log.49863714._003529.job.log.tgz.1
[2026-04-27 23:43:05]  workdir=None
[2026-04-27 23:43:05] ]
[2026-04-27 23:43:05] 2026-04-28 03:42:14,296 | INFO     | transferring file log.49863714._003529.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7116329102/log.49863714._003529.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-27 23:43:05] 2026-04-28 03:42:14,296 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7116329102/log.49863714._003529.job.log.tgz.1 /tmp/boinchome/slots/3/log.49863714._003529.job
[2026-04-27 23:43:05] 2026-04-28 03:42:14,309 | INFO     | adding to output.list: log.49863714._003529.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ab/log.49863714._003529.job.log.tg
[2026-04-27 23:43:05] 2026-04-28 03:42:14,311 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 23:43:05] 2026-04-28 03:42:14,311 | INFO     | summary of transferred files:
[2026-04-27 23:43:05] 2026-04-28 03:42:14,311 | INFO     |  -- lfn=log.49863714._003529.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 23:43:05] 2026-04-28 03:42:14,311 | INFO     | stage-out finished correctly
[2026-04-27 23:43:05] 2026-04-28 03:42:16,496 | INFO     | monitor loop #319: job 0:7116329102 is in state 'finished'
[2026-04-27 23:43:05] 2026-04-28 03:42:16,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 23:43:05] 2026-04-28 03:42:16,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 23:43:05] 2026-04-28 03:42:18,186 | INFO     | job 7116329102 has state=finished
[2026-04-27 23:43:05] 2026-04-28 03:42:18,186 | INFO     | preparing for final server update for job 7116329102 in state='finished'
[2026-04-27 23:43:05] 2026-04-28 03:42:18,186 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7116329102/jobReport.json
[2026-04-27 23:43:05] 2026-04-28 03:42:18,187 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-04-27 23:43:05] 2026-04-28 03:42:18,188 | INFO     | this job has now completed (state=finished)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,188 | INFO     | log transfer has been attempted: DONE
[2026-04-27 23:43:05] 2026-04-28 03:42:18,188 | INFO     | job 7116329102 has finished - writing final server update
[2026-04-27 23:43:05] 2026-04-28 03:42:18,188 | INFO     | total number of processed events: 400 (read)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,201 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7116329102/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,201 | INFO     | extracted standard info from prmon json
[2026-04-27 23:43:05] 2026-04-28 03:42:18,201 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 23:43:05] 2026-04-28 03:42:18,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 23:43:05] 2026-04-28 03:42:18,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 23:43:05] 2026-04-28 03:42:18,202 | INFO     | fitting pss+swap vs Time
[2026-04-27 23:43:05] 2026-04-28 03:42:18,202 | INFO     | sum of square deviations: 81266640.0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | sum of deviations: -1100177608.5
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | mean x (centered): 0.0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | mean y: 2623363.671875
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | intersect: 2623363.671875
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | chi2: 0.006082252803129964
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | current memory leak: -13.54 B/s (using 64 data points, chi2=0.01)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | ..............................
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . Timing measurements:
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . get job = 0 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . initial setup = 12 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . payload setup = 21 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . stage-in = 0 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . payload execution = 4305 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . stage-out = 0 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | . log creation = 0 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,203 | INFO     | ..............................
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | 
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | job summary report
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | --------------------------------------------------
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | PanDA job id: 7116329102
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | task id: 49863714
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | errors: (none)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | pilot state: finished 
[2026-04-27 23:43:05] 2026-04-28 03:42:18,239 | INFO     | transexitcode: 0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | exeerrorcode: 0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | exeerrordiag: 
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | exitcode: 0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | exitmsg: OK
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | cpuconsumptiontime: 31826 s
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | nevents: 400
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | neventsw: 0
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | pid: 3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | pgrp: 3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | corecount: 9
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | event service: False
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | sizes: {0: 2282462, 11: 2282462, 4330: 2317565, 4333: 2317565, 4334: 2317759}
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | --------------------------------------------------
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | 
[2026-04-27 23:43:05] 2026-04-28 03:42:18,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-27 23:43:05] 2026-04-28 03:42:18,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,251 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | job 7116329102 has completed (purged errors)
[2026-04-27 23:43:05] 2026-04-28 03:42:18,252 | INFO     | overall cleanup function is called
[2026-04-27 23:43:05] 2026-04-28 03:42:19,259 | INFO     | --- collectZombieJob: --- 10, [3662511]
[2026-04-27 23:43:05] 2026-04-28 03:42:19,259 | INFO     | zombie collector waiting for pid 3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:19,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 23:43:05] 2026-04-28 03:42:19,259 | INFO     | collected zombie processes
[2026-04-27 23:43:05] 2026-04-28 03:42:19,259 | INFO     | will attempt to kill all subprocesses of pid=3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:19,449 | INFO     | process IDs to be killed: [3662511] (in reverse order)
[2026-04-27 23:43:05] 2026-04-28 03:42:19,547 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 23:43:05] 2026-04-28 03:42:19,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 23:43:05] 2026-04-28 03:42:19,566 | INFO     | did not find any defunct processes belonging to 3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:19,579 | INFO     | did not find any defunct processes belonging to 3662511
[2026-04-27 23:43:05] 2026-04-28 03:42:19,579 | INFO     | Ready for new job
[2026-04-27 23:43:05] 2026-04-28 03:42:19,580 | INFO     | ***************************************
[2026-04-27 23:43:05] 2026-04-28 03:42:19,580 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 23:43:05] 2026-04-28 03:42:19,580 | INFO     | ***************************************
[2026-04-27 23:43:05] 2026-04-28 03:42:19,580 | INFO     | 
[2026-04-27 23:43:05] 2026-04-28 03:42:19,583 | INFO     | architecture information:
[2026-04-27 23:43:05] 2026-04-28 03:42:19,583 | INFO     | executing command: cat /etc/os-release
[2026-04-27 23:43:05] 2026-04-28 03:42:19,592 | INFO     | cat /etc/os-release:
[2026-04-27 23:43:05] NAME="CentOS Linux"
[2026-04-27 23:43:05] VERSION="7 (Core)"
[2026-04-27 23:43:05] ID="centos"
[2026-04-27 23:43:05] ID_LIKE="rhel fedora"
[2026-04-27 23:43:05] VERSION_ID="7"
[2026-04-27 23:43:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 23:43:05] ANSI_COLOR="0;31"
[2026-04-27 23:43:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 23:43:05] HOME_URL="https://www.centos.org/"
[2026-04-27 23:43:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 23:43:05] 
[2026-04-27 23:43:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 23:43:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 23:43:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 23:43:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 23:43:05] 
[2026-04-27 23:43:05] 2026-04-28 03:42:19,592 | INFO     | ***************************************
[2026-04-27 23:43:05] 2026-04-28 03:42:20,095 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-27 23:43:05] 2026-04-28 03:42:20,106 | INFO     | sufficient remaining disk space (75707187200 B)
[2026-04-27 23:43:05] 2026-04-28 03:42:20,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 23:43:05] 2026-04-28 03:42:20,106 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 23:43:05] 2026-04-28 03:42:20,106 | INFO     | update_server=False
[2026-04-27 23:43:05] 2026-04-28 03:42:20,106 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 23:43:05] 2026-04-28 03:42:20,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:43:05] 2026-04-28 03:42:20,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 23:43:05] 2026-04-28 03:42:20,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:43:05] 2026-04-28 03:42:20,108 | INFO     | aborting loop
[2026-04-27 23:43:05] 2026-04-28 03:42:20,197 | INFO     | all payload control threads have been joined
[2026-04-27 23:43:05] 2026-04-28 03:42:20,425 | INFO     | all data control threads have been joined
[2026-04-27 23:43:05] 2026-04-28 03:42:20,926 | INFO     | all job control threads have been joined
[2026-04-27 23:43:05] 2026-04-28 03:42:21,112 | INFO     | [job] retrieve thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,113 | INFO     | [job] queue monitor thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,113 | INFO     | [job] job monitor thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,201 | INFO     | [payload] control thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,227 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,255 | INFO     | [payload] validate_post thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,430 | INFO     | [data] control thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,752 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,906 | INFO     | [job] validate thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:21,932 | INFO     | [job] control thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:22,113 | INFO     | [data] copytool_out thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:22,321 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:22,384 | INFO     | [payload] failed_post thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:22,437 | INFO     | [data] copytool_in thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:22,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 23:43:05] 2026-04-28 03:42:26,865 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:30,786 | INFO     | job.realtimelogging is not enabled
[2026-04-27 23:43:05] 2026-04-28 03:42:31,793 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 23:43:05] 2026-04-28 03:42:50,211 | INFO     | PID=3644568 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 23:43:05] 2026-04-28 03:42:50,211 | INFO     | .. there are 4 such processes running
[2026-04-27 23:43:05] 2026-04-28 03:42:50,211 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 23:43:05] 2026-04-28 03:42:50,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 23:43:05] 2026-04-28 03:42:50,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 23:43:05] 2026-04-28 03:42:59,242 | INFO     | [monitor] cgroup control has ended
[2026-04-27 23:43:05] 2026-04-28 03:43:00,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898480908096)>', '<ExcThread(monitor, started 139897478309632)>']
[2026-04-27 23:43:05] 2026-04-28 03:43:01,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 23:43:05] 2026-04-28 03:43:01,267 | INFO     | [monitor] control thread has ended
[2026-04-27 23:43:05] 2026-04-28 03:43:05,584 | INFO     | all workflow threads have been joined
[2026-04-27 23:43:05] 2026-04-28 03:43:05,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 23:43:05] 2026-04-28 03:43:05,584 | INFO     | traces error code: 0
[2026-04-27 23:43:05] 2026-04-28 03:43:05,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 23:43:05] 2026-04-28 03:43:05,646 [wrapper] ==== pilot stdout END ====
[2026-04-27 23:43:05] 2026-04-28 03:43:05,647 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 23:43:05] 2026-04-28 03:43:05,649 [wrapper] pilotpid: 3644568
[2026-04-27 23:43:05] 2026-04-28 03:43:05,650 [wrapper] Pilot exit status: 0
[2026-04-27 23:43:05] 2026-04-28 03:43:05,656 [wrapper] pandaids: 7116329102
[2026-04-27 23:43:05] 2026-04-28 03:43:05,722 [wrapper] cleanup supervisor_pilot  354336 3644569
[2026-04-27 23:43:05] 2026-04-28 03:43:05,724 [wrapper] Test setup, not cleaning
[2026-04-27 23:43:05] 2026-04-28 03:43:05,726 [wrapper] apfmon messages muted
[2026-04-27 23:43:05] 2026-04-28 03:43:05,727 [wrapper] ==== wrapper stdout END ====
[2026-04-27 23:43:05] 2026-04-28 03:43:05,728 [wrapper] ==== wrapper stderr END ====
[2026-04-27 23:43:05]  *** Error codes and diagnostics ***
[2026-04-27 23:43:05]     "exeErrorCode": 0,
[2026-04-27 23:43:05]     "pilotErrorCode": 0,
[2026-04-27 23:43:05]  *** Listing of results directory ***
[2026-04-27 23:43:05] total 471372
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas    683926 Apr 27 19:07 pilot3.tar.gz
[2026-04-27 23:43:05] -rwx------. 1 boincer umatlas     36322 Apr 27 19:10 runpilot2-wrapper.sh
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas      5631 Apr 27 19:13 queuedata.json
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas       100 Apr 27 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 23:43:05] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 27 22:29 run_atlas
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas       105 Apr 27 22:29 job.xml
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas 261274663 Apr 27 22:29 EVNT.49863712._000163.pool.root.1
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas     15667 Apr 27 22:29 start_atlas.sh
[2026-04-27 23:43:05] drwxrwx--x. 2 boincer umatlas      4096 Apr 27 22:29 shared
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas    697415 Apr 27 22:29 input.tar.gz
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas         0 Apr 27 22:29 boinc_lockfile
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas      2574 Apr 27 22:29 pandaJob.out
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas        57 Apr 27 22:29 setup.sh.local
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas    997414 Apr 27 22:29 agis_schedconf.cvmfs.json
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas   1512704 Apr 27 22:29 agis_ddmendpoints.agis.ALL.json
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas       429 Apr 27 22:29 workernode_map.json
[2026-04-27 23:43:05] drwx------. 5 boincer umatlas      4096 Apr 27 22:29 pilot3
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas      7088 Apr 27 23:39 init_data.xml
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas       487 Apr 27 23:41 boinc_task_state.xml
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas 215786282 Apr 27 23:41 HITS.49863714._003529.pool.root.1
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas        95 Apr 27 23:42 pilot_heartbeat.json
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas      1031 Apr 27 23:42 memory_monitor_summary.json
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas    306254 Apr 27 23:42 log.49863714._003529.job.log.tgz.1
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas      6339 Apr 27 23:42 heartbeat_new.json
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas      6230 Apr 27 23:42 heartbeat.json
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas      8192 Apr 27 23:43 boinc_mmap_file
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas        27 Apr 27 23:43 wrapper_checkpoint.txt
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas      4894 Apr 27 23:43 pilotlog.txt
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas    434813 Apr 27 23:43 log.49863714._003529.job.log.1
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas       357 Apr 27 23:43 output.list
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas       410 Apr 27 23:43 runtime_log
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas    757760 Apr 27 23:43 result.tar.gz
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas      8954 Apr 27 23:43 runtime_log.err
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas       650 Apr 27 23:43 ecee28947863.diag
[2026-04-27 23:43:05] -rw-r--r--. 1 boincer umatlas     20864 Apr 27 23:43 stderr.txt
[2026-04-27 23:43:05] HITS file was successfully produced:
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas 215786282 Apr 27 23:41 shared/HITS.pool.root.1
[2026-04-27 23:43:05]  *** Contents of shared directory: ***
[2026-04-27 23:43:05] total 467332
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas 261274663 Apr 27 22:29 ATLAS.root_0
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas     15667 Apr 27 22:29 start_atlas.sh
[2026-04-27 23:43:05] -rw-r--r--. 2 boincer umatlas    697415 Apr 27 22:29 input.tar.gz
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas 215786282 Apr 27 23:41 HITS.pool.root.1
[2026-04-27 23:43:05] -rw-------. 1 boincer umatlas    757760 Apr 27 23:43 result.tar.gz
23:43:07 (3634222): run_atlas exited; CPU time 31910.925054
23:43:07 (3634222): called boinc_finish(0)

</stderr_txt>
]]>

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