Stderr output

<core_client_version>8.2.10</core_client_version>
<![CDATA[
<stderr_txt>
06:02:26 (22066): wrapper (7.7.26015): starting
06:02:26 (22066): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 06:02:26] Arguments: --nthreads 8
[2026-04-28 06:02:26] Threads: 8
[2026-04-28 06:02:26] Checking for CVMFS
[2026-04-28 06:02:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 06:02:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 06:02:27] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 06:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 06:02:27] 2.11.0.0 6204 18610 61216 158952 1 188 3302838 4096001 916 130560 0 1103371 99.368 1176576 295 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-04-28 06:02:27] CVMFS is ok
[2026-04-28 06:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 06:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 06:02:27] Further information can be found at the LHC@home message board.
[2026-04-28 06:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 06:02:27] Checking for apptainer binary...
[2026-04-28 06:02:27] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-04-28 06:02:27] apptainer is not installed, using version from CVMFS
[2026-04-28 06:02:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 06:02:27] WARNING: Environment variable TMPDIR already has value [/tmp/job_11553614/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node406
[2026-04-28 06:02:27] apptainer works
[2026-04-28 06:02:27] Set ATHENA_PROC_NUMBER=8
[2026-04-28 06:02:27] Set ATHENA_CORE_NUMBER=8
[2026-04-28 06:02:27] Starting ATLAS job with PandaID=7116293938
[2026-04-28 06:02:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11553614/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 07:03:44]  *** The last 200 lines of the pilot log: ***
[2026-04-28 07:03:45]  ddm_activity=['write_lan', 'write_wan']
[2026-04-28 07:03:45]  ddmendpoint=NDGF-T1_DATADISK
[2026-04-28 07:03:45]  ddmendpoint_alt=None
[2026-04-28 07:03:45]  direct_access_lan=False
[2026-04-28 07:03:45]  direct_access_wan=False
[2026-04-28 07:03:45]  domain=
[2026-04-28 07:03:45]  filesize=297517
[2026-04-28 07:03:45]  filetype=log
[2026-04-28 07:03:45]  guid=d8e2e8be-9096-4a78-a008-efce4c6d4a62
[2026-04-28 07:03:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-28 07:03:45]  is_altstaged=None
[2026-04-28 07:03:45]  is_tar=False
[2026-04-28 07:03:45]  lfn=log.49863879._000241.job.log.tgz.1
[2026-04-28 07:03:45]  mtime=0
[2026-04-28 07:03:45]  protocol_id=None
[2026-04-28 07:03:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-28 07:03:45]  replicas=None
[2026-04-28 07:03:45]  scope=mc23_13p6TeV
[2026-04-28 07:03:45]  status=None
[2026-04-28 07:03:45]  status_code=0
[2026-04-28 07:03:45]  storage_token=
[2026-04-28 07:03:45]  surl=/tmp/job_11553614/atlas/pilot/slots/0/PanDA_Pilot-7116293938/log.49863879._000241.job.log.tgz.1
[2026-04-28 07:03:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/b1/log.49863879._000241.job.log.tgz.1
[2026-04-28 07:03:45]  workdir=None
[2026-04-28 07:03:45] ]
[2026-04-28 07:03:45] 2026-04-28 05:03:03,704 | INFO     | transferring file log.49863879._000241.job.log.tgz.1 from /tmp/job_11553614/atlas/pilot/slots/0/PanDA_Pilot-7116293938/log.49863879._000241.job.log.tgz.1 to /tmp/j
[2026-04-28 07:03:45] 2026-04-28 05:03:03,704 | INFO     | executing command: /usr/bin/env mv /tmp/job_11553614/atlas/pilot/slots/0/PanDA_Pilot-7116293938/log.49863879._000241.job.log.tgz.1 /tmp/job_11553614/atlas/pilot/sl
[2026-04-28 07:03:45] 2026-04-28 05:03:03,711 | INFO     | adding to output.list: log.49863879._000241.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/b1/log.49863879._000241.job.log.tg
[2026-04-28 07:03:45] 2026-04-28 05:03:03,712 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 07:03:45] 2026-04-28 05:03:03,712 | INFO     | summary of transferred files:
[2026-04-28 07:03:45] 2026-04-28 05:03:03,712 | INFO     |  -- lfn=log.49863879._000241.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 07:03:45] 2026-04-28 05:03:03,712 | INFO     | stage-out finished correctly
[2026-04-28 07:03:45] 2026-04-28 05:03:05,188 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 07:03:45] 2026-04-28 05:03:05,372 | INFO     | job 7116293938 has state=finished
[2026-04-28 07:03:45] 2026-04-28 05:03:05,372 | INFO     | preparing for final server update for job 7116293938 in state='finished'
[2026-04-28 07:03:45] 2026-04-28 05:03:05,372 | INFO     | reading metadata from: /tmp/job_11553614/atlas/pilot/slots/0/PanDA_Pilot-7116293938/jobReport.json
[2026-04-28 07:03:45] 2026-04-28 05:03:05,373 | INFO     | added worker_node to metadata from /tmp/job_11553614/atlas/pilot/slots/0/workernode_map.json
[2026-04-28 07:03:45] 2026-04-28 05:03:05,373 | INFO     | this job has now completed (state=finished)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,373 | INFO     | log transfer has been attempted: DONE
[2026-04-28 07:03:45] 2026-04-28 05:03:05,373 | INFO     | job 7116293938 has finished - writing final server update
[2026-04-28 07:03:45] 2026-04-28 05:03:05,374 | INFO     | total number of processed events: 400 (read)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,391 | INFO     | using path: /tmp/job_11553614/atlas/pilot/slots/0/PanDA_Pilot-7116293938/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,391 | INFO     | extracted standard info from prmon json
[2026-04-28 07:03:45] 2026-04-28 05:03:05,391 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 07:03:45] 2026-04-28 05:03:05,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 07:03:45] 2026-04-28 05:03:05,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | fitting pss+swap vs Time
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | sum of square deviations: 46147842.0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | sum of deviations: -223187409.99999994
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | mean x (centered): 0.0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | mean y: 2608157.5849056602
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | intersect: 2608157.5849056602
[2026-04-28 07:03:45] 2026-04-28 05:03:05,392 | INFO     | chi2: 0.02042480112965172
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | current memory leak: -4.84 B/s (using 53 data points, chi2=0.02)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | could have reported an average CPU frequency of 2488 MHz (6 samples)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | ..............................
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . Timing measurements:
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . get job = 0 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . initial setup = 2 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . payload setup = 3 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . stage-in = 0 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . payload execution = 3610 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . stage-out = 0 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | . log creation = 0 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,393 | INFO     | ..............................
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | 
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | job summary report
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | --------------------------------------------------
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | PanDA job id: 7116293938
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | task id: 49863879
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | errors: (none)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | pilot state: finished 
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | transexitcode: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | exeerrorcode: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | exeerrordiag: 
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | exitcode: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,441 | INFO     | exitmsg: OK
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | cpuconsumptiontime: 26975 s
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | nevents: 400
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | neventsw: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | pid: 32239
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | pgrp: 32239
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | corecount: 8
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | event service: False
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | sizes: {0: 2282632, 10: 2282632, 3617: 2308530, 3619: 2317558, 3621: 2317808}
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | --------------------------------------------------
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | 
[2026-04-28 07:03:45] 2026-04-28 05:03:05,442 | INFO     | executing command: ls -lF /tmp/job_11553614/atlas/pilot/slots/0
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | job 7116293938 has completed (purged errors)
[2026-04-28 07:03:45] 2026-04-28 05:03:05,452 | INFO     | overall cleanup function is called
[2026-04-28 07:03:45] 2026-04-28 05:03:06,458 | INFO     | --- collectZombieJob: --- 10, [32239]
[2026-04-28 07:03:45] 2026-04-28 05:03:06,458 | INFO     | zombie collector waiting for pid 32239
[2026-04-28 07:03:45] 2026-04-28 05:03:06,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 07:03:45] 2026-04-28 05:03:06,458 | INFO     | collected zombie processes
[2026-04-28 07:03:45] 2026-04-28 05:03:06,458 | INFO     | will attempt to kill all subprocesses of pid=32239
[2026-04-28 07:03:45] 2026-04-28 05:03:06,533 | INFO     | process IDs to be killed: [32239] (in reverse order)
[2026-04-28 07:03:45] 2026-04-28 05:03:06,563 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 07:03:45] 2026-04-28 05:03:06,563 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 07:03:45] 2026-04-28 05:03:06,566 | INFO     | did not find any defunct processes belonging to 32239
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | did not find any defunct processes belonging to 32239
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | Ready for new job
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | ***************************************
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | ***************************************
[2026-04-28 07:03:45] 2026-04-28 05:03:06,569 | INFO     | 
[2026-04-28 07:03:45] 2026-04-28 05:03:06,583 | INFO     | architecture information:
[2026-04-28 07:03:45] 2026-04-28 05:03:06,584 | INFO     | executing command: cat /etc/os-release
[2026-04-28 07:03:45] 2026-04-28 05:03:06,589 | INFO     | cat /etc/os-release:
[2026-04-28 07:03:45] NAME="CentOS Linux"
[2026-04-28 07:03:45] VERSION="7 (Core)"
[2026-04-28 07:03:45] ID="centos"
[2026-04-28 07:03:45] ID_LIKE="rhel fedora"
[2026-04-28 07:03:45] VERSION_ID="7"
[2026-04-28 07:03:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 07:03:45] ANSI_COLOR="0;31"
[2026-04-28 07:03:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 07:03:45] HOME_URL="https://www.centos.org/"
[2026-04-28 07:03:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 07:03:45] 
[2026-04-28 07:03:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 07:03:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 07:03:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 07:03:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 07:03:45] 
[2026-04-28 07:03:45] 2026-04-28 05:03:06,589 | INFO     | ***************************************
[2026-04-28 07:03:45] 2026-04-28 05:03:07,092 | INFO     | executing command: df -mP /tmp/job_11553614/atlas/pilot/slots/0
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | INFO     | sufficient remaining disk space (218787479552 B)
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | INFO     | update_server=False
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 07:03:45] 2026-04-28 05:03:07,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 07:03:45] 2026-04-28 05:03:07,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 07:03:45] 2026-04-28 05:03:07,099 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 07:03:45] 2026-04-28 05:03:07,099 | INFO     | aborting loop
[2026-04-28 07:03:45] 2026-04-28 05:03:07,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 07:03:45] 2026-04-28 05:03:07,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 07:03:45] 2026-04-28 05:03:07,626 | INFO     | job.realtimelogging is not enabled
[2026-04-28 07:03:45] 2026-04-28 05:03:07,696 | INFO     | all job control threads have been joined
[2026-04-28 07:03:45] 2026-04-28 05:03:07,785 | INFO     | all data control threads have been joined
[2026-04-28 07:03:45] 2026-04-28 05:03:07,975 | INFO     | all payload control threads have been joined
[2026-04-28 07:03:45] 2026-04-28 05:03:08,103 | INFO     | [job] retrieve thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,104 | INFO     | [job] queue monitor thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,104 | INFO     | [job] job monitor thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,571 | INFO     | [job] validate thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,594 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,601 | INFO     | [payload] failed_post thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,631 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,702 | INFO     | [job] control thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,773 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,791 | INFO     | [data] control thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:08,980 | INFO     | [payload] control thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:09,046 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:09,104 | INFO     | [data] copytool_out thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:09,167 | INFO     | [data] copytool_in thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:09,483 | INFO     | [payload] validate_post thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:11,104 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 07:03:45] 2026-04-28 05:03:39,709 | INFO     | [monitor] cgroup control has ended
[2026-04-28 07:03:45] 2026-04-28 05:03:39,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067565312)>']
[2026-04-28 07:03:45] 2026-04-28 05:03:40,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 07:03:45] 2026-04-28 05:03:40,265 | INFO     | [monitor] control thread has ended
[2026-04-28 07:03:45] 2026-04-28 05:03:44,831 | INFO     | all workflow threads have been joined
[2026-04-28 07:03:45] 2026-04-28 05:03:44,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 07:03:45] 2026-04-28 05:03:44,831 | INFO     | traces error code: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:44,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 07:03:45] 2026-04-28 05:03:44,884 [wrapper] ==== pilot stdout END ====
[2026-04-28 07:03:45] 2026-04-28 05:03:44,886 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 07:03:45] 2026-04-28 05:03:44,887 [wrapper] pilotpid: 26678
[2026-04-28 07:03:45] 2026-04-28 05:03:44,888 [wrapper] Pilot exit status: 0
[2026-04-28 07:03:45] 2026-04-28 05:03:44,892 [wrapper] pandaids: 7116293938
[2026-04-28 07:03:45] 2026-04-28 05:03:44,911 [wrapper] cleanup supervisor_pilot 20080 26679
[2026-04-28 07:03:45] 2026-04-28 05:03:44,912 [wrapper] Test setup, not cleaning
[2026-04-28 07:03:45] 2026-04-28 05:03:44,913 [wrapper] apfmon messages muted
[2026-04-28 07:03:45] 2026-04-28 05:03:44,915 [wrapper] ==== wrapper stdout END ====
[2026-04-28 07:03:45] 2026-04-28 05:03:44,916 [wrapper] ==== wrapper stderr END ====
[2026-04-28 07:03:45]  *** Error codes and diagnostics ***
[2026-04-28 07:03:45]     "exeErrorCode": 0,
[2026-04-28 07:03:45]     "pilotErrorCode": 0,
[2026-04-28 07:03:45]  *** Listing of results directory ***
[2026-04-28 07:03:45] total 466848
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    683926 Apr 27 23:55 pilot3.tar.gz
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      5631 Apr 28 00:43 queuedata.json
[2026-04-28 07:03:45] -rwx------ 1 mf493845 unix-user     36322 Apr 28 00:44 runpilot2-wrapper.sh
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       100 Apr 28 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 07:03:45] -rwxr-xr-x 1 mf493845 unix-user      7986 Apr 28 04:56 run_atlas
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       105 Apr 28 04:56 job.xml
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user     15667 Apr 28 06:02 start_atlas.sh
[2026-04-28 07:03:45] drwxrwx--x 2 mf493845 unix-user       100 Apr 28 06:02 shared
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user    697414 Apr 28 06:02 input.tar.gz
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user 258697807 Apr 28 06:02 EVNT.49863876._000012.pool.root.1
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user         0 Apr 28 06:02 boinc_setup_complete
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      6306 Apr 28 06:02 init_data.xml
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      8192 Apr 28 06:02 boinc_mmap_file
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user         0 Apr 28 06:02 boinc_lockfile
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      2571 Apr 28 06:02 pandaJob.out
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    996684 Apr 28 06:02 agis_schedconf.cvmfs.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user   1512704 Apr 28 06:02 agis_ddmendpoints.agis.ALL.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       415 Apr 28 06:02 workernode_map.json
[2026-04-28 07:03:45] drwx------ 5 mf493845 unix-user       520 Apr 28 06:02 pilot3
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user        95 Apr 28 07:02 pilot_heartbeat.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user 213885296 Apr 28 07:02 HITS.49863879._000241.pool.root.1
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      1011 Apr 28 07:02 memory_monitor_summary.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    297517 Apr 28 07:03 log.49863879._000241.job.log.tgz.1
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      6329 Apr 28 07:03 heartbeat_new.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      6219 Apr 28 07:03 heartbeat.json
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      4637 Apr 28 07:03 pilotlog.txt
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    381706 Apr 28 07:03 log.49863879._000241.job.log.1
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       357 Apr 28 07:03 output.list
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       410 Apr 28 07:03 runtime_log
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    696320 Apr 28 07:03 result.tar.gz
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user      8842 Apr 28 07:03 runtime_log.err
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user       642 Apr 28 07:03 e6b73b7d5e8c.diag
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user     21100 Apr 28 07:03 stderr.txt
[2026-04-28 07:03:45] HITS file was successfully produced:
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user 213885296 Apr 28 07:02 shared/HITS.pool.root.1
[2026-04-28 07:03:45]  *** Contents of shared directory: ***
[2026-04-28 07:03:45] total 462892
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user     15667 Apr 28 06:02 start_atlas.sh
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user    697414 Apr 28 06:02 input.tar.gz
[2026-04-28 07:03:45] -rw-r--r-- 2 mf493845 unix-user 258697807 Apr 28 06:02 ATLAS.root_0
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user 213885296 Apr 28 07:02 HITS.pool.root.1
[2026-04-28 07:03:45] -rw------- 1 mf493845 unix-user    696320 Apr 28 07:03 result.tar.gz
07:03:46 (22066): run_atlas exited; CPU time 27018.476871
07:03:46 (22066): called boinc_finish(0)

</stderr_txt>
]]>

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