Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:18 (311494): wrapper (7.7.26015): starting
13:52:18 (311494): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 13:52:18] Arguments: --nthreads 4
[2026-04-28 13:52:18] Threads: 4
[2026-04-28 13:52:18] Checking for CVMFS
[2026-04-28 13:52:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 13:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 13:52:19] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 13:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 13:52:19] 2.9.2.0 4129081 2680 91588 158965 1 50 20951834 36864001 0 130560 0 1383210 99.984 102331 11102 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-28 13:52:19] CVMFS is ok
[2026-04-28 13:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 13:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 13:52:19] Further information can be found at the LHC@home message board.
[2026-04-28 13:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 13:52:19] Checking for apptainer binary...
[2026-04-28 13:52:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 13:52:19] Running /usr/bin/apptainer --version
[2026-04-28 13:52:19] apptainer version 1.4.1-1.1
[2026-04-28 13:52:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 13:52:19] magicA250
[2026-04-28 13:52:19] apptainer works
[2026-04-28 13:52:19] Set ATHENA_PROC_NUMBER=4
[2026-04-28 13:52:19] Set ATHENA_CORE_NUMBER=4
[2026-04-28 13:52:19] Starting ATLAS job with PandaID=7116245600
[2026-04-28 13:52:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 15:07:47]  *** The last 200 lines of the pilot log: ***
[2026-04-28 15:07:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 15:07:47] 
[2026-04-28 15:07:47] 2026-04-28 13:07:16,934 | INFO     | ***************************************
[2026-04-28 15:07:47] 2026-04-28 13:07:17,437 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-28 15:07:47] 2026-04-28 13:07:17,455 | INFO     | sufficient remaining disk space (330082287616 B)
[2026-04-28 15:07:47] 2026-04-28 13:07:17,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 15:07:47] 2026-04-28 13:07:17,455 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 15:07:47] 2026-04-28 13:07:17,456 | INFO     | update_server=False
[2026-04-28 15:07:47] 2026-04-28 13:07:17,456 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 15:07:47] 2026-04-28 13:07:17,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 15:07:47] 2026-04-28 13:07:17,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 15:07:47] 2026-04-28 13:07:17,762 | INFO     | all payload control threads have been joined
[2026-04-28 15:07:47] 2026-04-28 13:07:18,458 | INFO     | [job] queue monitor thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:18,461 | INFO     | [job] retrieve thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:18,484 | INFO     | all data control threads have been joined
[2026-04-28 15:07:47] 2026-04-28 13:07:18,551 | INFO     | [job] validate thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:18,768 | INFO     | [payload] control thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:18,768 | INFO     | [payload] failed_post thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,037 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,091 | INFO     | all job control threads have been joined
[2026-04-28 15:07:47] 2026-04-28 13:07:19,257 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,312 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,374 | WARNING  | process 320130 can no longer be monitored (due to stat problems) - aborting
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | WARNING  | maxPSS not found in memory monitor output
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7116245600/payload.stdout) since it has not been created yet
[2026-04-28 15:07:47] 2026-04-28 13:07:19,404 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-28 15:07:47] 2026-04-28 13:07:19,420 | INFO     | sufficient remaining disk space (330082287616 B)
[2026-04-28 15:07:47] 2026-04-28 13:07:19,420 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-28 15:07:47] 2026-04-28 13:07:19,420 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7116245600/HITS.49718416._012379.pool.root.1 since it does not exist
[2026-04-28 15:07:47] 2026-04-28 13:07:19,448 | INFO     | [data] copytool_in thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,450 | INFO     | number of running child processes to parent process 320130: 1
[2026-04-28 15:07:47] 2026-04-28 13:07:19,450 | INFO     | maximum number of monitored processes: 6
[2026-04-28 15:07:47] 2026-04-28 13:07:19,450 | INFO     | aborting job monitoring since job object (job id=7116245600) has expired
[2026-04-28 15:07:47] 2026-04-28 13:07:19,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 15:07:47] 2026-04-28 13:07:19,450 | INFO     | will abort loop
[2026-04-28 15:07:47] 2026-04-28 13:07:19,462 | INFO     | [data] copytool_out thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,490 | INFO     | [data] control thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:19,593 | INFO     | [payload] validate_post thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:20,097 | INFO     | [job] control thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:20,456 | INFO     | [job] job monitor thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:20,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 15:07:47] 2026-04-28 13:07:24,728 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:27,268 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-04-28 15:07:47] 2026-04-28 13:07:28,295 | INFO     | job.realtimelogging is not enabled
[2026-04-28 15:07:47] 2026-04-28 13:07:29,301 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 15:07:47] 2026-04-28 13:07:38,328 | INFO     | [monitor] cgroup control has ended
[2026-04-28 15:07:47] 2026-04-28 13:07:40,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483973355328)>', '<ExcThread(monitor, started 140482608887552)>']
[2026-04-28 15:07:47] 2026-04-28 13:07:45,218 | INFO     | all workflow threads have been joined
[2026-04-28 15:07:47] 2026-04-28 13:07:45,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 15:07:47] 2026-04-28 13:07:45,219 | INFO     | traces error code: 0
[2026-04-28 15:07:47] 2026-04-28 13:07:45,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 15:07:47] 2026-04-28 13:07:47,135 | INFO     | PID=315618 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-28 15:07:47] 2026-04-28 13:07:47,136 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 15:07:47] 2026-04-28 13:07:47,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 15:07:47] 2026-04-28 13:07:47,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 15:07:47] 2026-04-28 13:07:47,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 15:07:47] 2026-04-28 13:07:47,136 | INFO     | [monitor] control thread has ended
[2026-04-28 15:07:47] 2026-04-28 13:07:47,210 [wrapper] ==== pilot stdout END ====
[2026-04-28 15:07:47] 2026-04-28 13:07:47,215 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 15:07:47] 2026-04-28 13:07:47,219 [wrapper] pilotpid: 315618
[2026-04-28 15:07:47] 2026-04-28 13:07:47,223 [wrapper] Pilot exit status: 0
[2026-04-28 15:07:47] 2026-04-28 13:07:47,235 [wrapper] pandaids: 7116245600
[2026-04-28 15:07:47] 2026-04-28 13:07:47,257 [wrapper] cleanup supervisor_pilot  326823 315619
[2026-04-28 15:07:47] 2026-04-28 13:07:47,261 [wrapper] Test setup, not cleaning
[2026-04-28 15:07:47] 2026-04-28 13:07:47,265 [wrapper] apfmon messages muted
[2026-04-28 15:07:47] 2026-04-28 13:07:47,269 [wrapper] ==== wrapper stdout END ====
[2026-04-28 15:07:47] 2026-04-28 13:07:47,273 [wrapper] ==== wrapper stderr END ====
[2026-04-28 15:07:47]  *** Error codes and diagnostics ***
[2026-04-28 15:07:47]     "exeErrorCode": 0,
[2026-04-28 15:07:47]     "pilotErrorCode": 0,
[2026-04-28 15:07:47]  *** Listing of results directory ***
[2026-04-28 15:07:47] total 625528
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc    683926 Apr 28 02:34 pilot3.tar.gz
[2026-04-28 15:07:47] -rwx------ 1 boinc boinc     36322 Apr 28 02:37 runpilot2-wrapper.sh
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      5631 Apr 28 02:38 queuedata.json
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc       100 Apr 28 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 15:07:47] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 13:52 run_atlas
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc       105 Apr 28 13:52 job.xml
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc 446300305 Apr 28 13:52 EVNT.46373187._000027.pool.root.1
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc    697426 Apr 28 13:52 input.tar.gz
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc     15667 Apr 28 13:52 start_atlas.sh
[2026-04-28 15:07:47] drwxrwx--x 2 boinc boinc      4096 Apr 28 13:52 shared
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc         0 Apr 28 13:52 boinc_setup_complete
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      6294 Apr 28 13:52 init_data.xml
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc         0 Apr 28 13:52 boinc_lockfile
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      2595 Apr 28 13:52 pandaJob.out
[2026-04-28 15:07:47] -rw------- 1 boinc boinc    993621 Apr 28 13:52 agis_schedconf.cvmfs.json
[2026-04-28 15:07:47] -rw------- 1 boinc boinc   1512704 Apr 28 13:52 agis_ddmendpoints.agis.ALL.json
[2026-04-28 15:07:47] -rw------- 1 boinc boinc       424 Apr 28 13:52 workernode_map.json
[2026-04-28 15:07:47] drwx------ 5 boinc boinc      4096 Apr 28 13:52 pilot3
[2026-04-28 15:07:47] -rw------- 1 boinc boinc        95 Apr 28 15:06 pilot_heartbeat.json
[2026-04-28 15:07:47] -rw------- 1 boinc boinc 188701160 Apr 28 15:06 HITS.49718416._012379.pool.root.1
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc       488 Apr 28 15:07 boinc_task_state.xml
[2026-04-28 15:07:47] -rw------- 1 boinc boinc      1022 Apr 28 15:07 memory_monitor_summary.json
[2026-04-28 15:07:47] -rw------- 1 boinc boinc    266794 Apr 28 15:07 log.49718416._012379.job.log.tgz.1
[2026-04-28 15:07:47] -rw------- 1 boinc boinc      6336 Apr 28 15:07 heartbeat_new.json
[2026-04-28 15:07:47] -rw------- 1 boinc boinc      6227 Apr 28 15:07 heartbeat.json
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      8192 Apr 28 15:07 boinc_mmap_file
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc        27 Apr 28 15:07 wrapper_checkpoint.txt
[2026-04-28 15:07:47] -rw------- 1 boinc boinc       746 Apr 28 15:07 pilotlog.txt
[2026-04-28 15:07:47] -rw------- 1 boinc boinc    444399 Apr 28 15:07 log.49718416._012379.job.log.1
[2026-04-28 15:07:47] -rw------- 1 boinc boinc       357 Apr 28 15:07 output.list
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc       410 Apr 28 15:07 runtime_log
[2026-04-28 15:07:47] -rw------- 1 boinc boinc    727040 Apr 28 15:07 result.tar.gz
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      8534 Apr 28 15:07 runtime_log.err
[2026-04-28 15:07:47] -rw------- 1 boinc boinc       660 Apr 28 15:07 016640055d28.diag
[2026-04-28 15:07:47] -rw-r--r-- 1 boinc boinc      9926 Apr 28 15:07 stderr.txt
[2026-04-28 15:07:47] HITS file was successfully produced:
[2026-04-28 15:07:47] -rw------- 1 boinc boinc 188701160 Apr 28 15:06 shared/HITS.pool.root.1
[2026-04-28 15:07:47]  *** Contents of shared directory: ***
[2026-04-28 15:07:47] total 621540
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc 446300305 Apr 28 13:52 ATLAS.root_0
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc    697426 Apr 28 13:52 input.tar.gz
[2026-04-28 15:07:47] -rw-r--r-- 2 boinc boinc     15667 Apr 28 13:52 start_atlas.sh
[2026-04-28 15:07:47] -rw------- 1 boinc boinc 188701160 Apr 28 15:06 HITS.pool.root.1
[2026-04-28 15:07:47] -rw------- 1 boinc boinc    727040 Apr 28 15:07 result.tar.gz
15:07:48 (311494): run_atlas exited; CPU time 15999.585622
15:07:48 (311494): called boinc_finish(0)

</stderr_txt>
]]>

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