Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:15:16 (5320): wrapper (7.7.26015): starting
19:15:16 (5320): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 19:15:16] Arguments: --nthreads 8
[2026-04-28 19:15:16] Threads: 8
[2026-04-28 19:15:16] Checking for CVMFS
[2026-04-28 19:15:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 19:15:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 19:15:22] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 19:15:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 19:15:24] 2.11.2.0 10636 18731 103328 158975 1 53 14450202 25165825 96 130560 0 6422436 99.894 5179719 9639 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 19:15:24] CVMFS is ok
[2026-04-28 19:15:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 19:15:24] Checking for apptainer binary...
[2026-04-28 19:15:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 19:15:24] Running /usr/bin/apptainer --version
[2026-04-28 19:15:24] apptainer version 1.3.2-1.el7
[2026-04-28 19:15:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 19:15:43] cg-vwn366.simple-grid.lan
[2026-04-28 19:15:43] apptainer works
[2026-04-28 19:15:43] Set ATHENA_PROC_NUMBER=8
[2026-04-28 19:15:43] Set ATHENA_CORE_NUMBER=8
[2026-04-28 19:15:43] Starting ATLAS job with PandaID=7116245586
[2026-04-28 19:15:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 23:44:25]  *** The last 200 lines of the pilot log: ***
[2026-04-28 23:44:25] 2026-04-28 21:43:29,923 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,924 | INFO     | log transfer has been attempted: DONE
[2026-04-28 23:44:25] 2026-04-28 21:43:29,924 | INFO     | job 7116245586 has finished - writing final server update
[2026-04-28 23:44:25] 2026-04-28 21:43:29,924 | INFO     | total number of processed events: 400 (read)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,926 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7116245586/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,927 | INFO     | extracted standard info from prmon json
[2026-04-28 23:44:25] 2026-04-28 21:43:29,927 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 23:44:25] 2026-04-28 21:43:29,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 23:44:25] 2026-04-28 21:43:29,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 23:44:25] 2026-04-28 21:43:29,933 | INFO     | fitting pss+swap vs Time
[2026-04-28 23:44:25] 2026-04-28 21:43:29,933 | INFO     | sum of square deviations: 4903347750.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,936 | INFO     | sum of deviations: 110429569471.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,936 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,936 | INFO     | mean y: 2405468.4302788842
[2026-04-28 23:44:25] 2026-04-28 21:43:29,936 | INFO     | intersect: 2405468.4302788842
[2026-04-28 23:44:25] 2026-04-28 21:43:29,937 | INFO     | chi2: 10.262189601164685
[2026-04-28 23:44:25] 2026-04-28 21:43:29,937 | INFO     | sum of square deviations: 4616114457.5
[2026-04-28 23:44:25] 2026-04-28 21:43:29,940 | INFO     | sum of deviations: 141876594288.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,940 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,940 | INFO     | mean y: 2421947.975609756
[2026-04-28 23:44:25] 2026-04-28 21:43:29,940 | INFO     | intersect: 2421947.975609756
[2026-04-28 23:44:25] 2026-04-28 21:43:29,944 | INFO     | chi2: 8.77757921778024
[2026-04-28 23:44:25] 2026-04-28 21:43:29,945 | INFO     | current chi2=8.77757921778024 (change=14.466799397430282 %)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,945 | INFO     | right removable region: 245
[2026-04-28 23:44:25] 2026-04-28 21:43:29,945 | INFO     | sum of square deviations: 4616114457.5
[2026-04-28 23:44:25] 2026-04-28 21:43:29,948 | INFO     | sum of deviations: 22365767821.50006
[2026-04-28 23:44:25] 2026-04-28 21:43:29,948 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,948 | INFO     | mean y: 2452202.7601626017
[2026-04-28 23:44:25] 2026-04-28 21:43:29,948 | INFO     | intersect: 2452202.7601626017
[2026-04-28 23:44:25] 2026-04-28 21:43:29,948 | INFO     | chi2: 4.994627657559934
[2026-04-28 23:44:25] 2026-04-28 21:43:29,949 | INFO     | current chi2=4.994627657559934 (change=51.32980531763827 %)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,949 | INFO     | sum of square deviations: 4340323240.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,951 | INFO     | sum of deviations: -46617779900.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,952 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,952 | INFO     | mean y: 2490323.9128630706
[2026-04-28 23:44:25] 2026-04-28 21:43:29,952 | INFO     | intersect: 2490323.9128630706
[2026-04-28 23:44:25] 2026-04-28 21:43:29,952 | INFO     | chi2: 2.02134308029278
[2026-04-28 23:44:25] 2026-04-28 21:43:29,952 | INFO     | current chi2=2.02134308029278 (change=59.52965428297246 %)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,953 | INFO     | sum of square deviations: 4075741535.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,955 | INFO     | sum of deviations: -59164075009.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,955 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,955 | INFO     | mean y: 2497491.2118644067
[2026-04-28 23:44:25] 2026-04-28 21:43:29,956 | INFO     | intersect: 2497491.2118644067
[2026-04-28 23:44:25] 2026-04-28 21:43:29,956 | INFO     | chi2: 1.8430557311030162
[2026-04-28 23:44:25] 2026-04-28 21:43:29,956 | INFO     | current chi2=1.8430557311030162 (change=8.820241894015327 %)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,956 | INFO     | left removable region: 15
[2026-04-28 23:44:25] 2026-04-28 21:43:29,957 | INFO     | sum of square deviations: 3772712597.5
[2026-04-28 23:44:25] 2026-04-28 21:43:29,959 | INFO     | sum of deviations: -26165024538.499996
[2026-04-28 23:44:25] 2026-04-28 21:43:29,959 | INFO     | mean x (centered): 0.0
[2026-04-28 23:44:25] 2026-04-28 21:43:29,959 | INFO     | mean y: 2517091.204347826
[2026-04-28 23:44:25] 2026-04-28 21:43:29,959 | INFO     | intersect: 2517091.204347826
[2026-04-28 23:44:25] 2026-04-28 21:43:29,960 | INFO     | chi2: 0.15444746219526007
[2026-04-28 23:44:25] 2026-04-28 21:43:29,960 | INFO     | current memory leak: -6.94 B/s (using 230 data points, chi2=0.15)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | ..............................
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | . Timing measurements:
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | . get job = 0 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | . initial setup = 127 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | . payload setup = 224 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,961 | INFO     | . stage-in = 0 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,962 | INFO     | . payload execution = 15395 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,962 | INFO     | . stage-out = 3 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,962 | INFO     | . log creation = 1 s
[2026-04-28 23:44:25] 2026-04-28 21:43:29,962 | INFO     | ..............................
[2026-04-28 23:44:25] 2026-04-28 21:43:30,104 | INFO     | 
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | job summary report
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | --------------------------------------------------
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | PanDA job id: 7116245586
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | task id: 49718416
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | errors: (none)
[2026-04-28 23:44:25] 2026-04-28 21:43:30,105 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | pilot state: finished 
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | transexitcode: 0
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | exeerrorcode: 0
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | exeerrordiag: 
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | exitcode: 0
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | exitmsg: OK
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | cpuconsumptiontime: 57758 s
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | nevents: 400
[2026-04-28 23:44:25] 2026-04-28 21:43:30,106 | INFO     | neventsw: 0
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | pid: 13824
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | pgrp: 13824
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | corecount: 8
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | event service: False
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | sizes: {0: 2280677, 1: 2280932, 2: 2282506, 12: 2282534, 15624: 2313709, 15625: 2313708, 15629: 2322890, 15630: 2322946, 15631: 2323140}
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | --------------------------------------------------
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | 
[2026-04-28 23:44:25] 2026-04-28 21:43:30,107 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | job 7116245586 has completed (purged errors)
[2026-04-28 23:44:25] 2026-04-28 21:43:30,642 | INFO     | overall cleanup function is called
[2026-04-28 23:44:25] 2026-04-28 21:43:31,651 | INFO     | --- collectZombieJob: --- 10, [13824]
[2026-04-28 23:44:25] 2026-04-28 21:43:31,652 | INFO     | zombie collector waiting for pid 13824
[2026-04-28 23:44:25] 2026-04-28 21:43:31,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 23:44:25] 2026-04-28 21:43:31,652 | INFO     | collected zombie processes
[2026-04-28 23:44:25] 2026-04-28 21:43:31,652 | INFO     | will attempt to kill all subprocesses of pid=13824
[2026-04-28 23:44:25] 2026-04-28 21:43:31,713 | INFO     | process IDs to be killed: [13824] (in reverse order)
[2026-04-28 23:44:25] 2026-04-28 21:43:32,673 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 23:44:25] 2026-04-28 21:43:32,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 23:44:25] 2026-04-28 21:43:32,676 | INFO     | did not find any defunct processes belonging to 13824
[2026-04-28 23:44:25] 2026-04-28 21:43:32,677 | INFO     | did not find any defunct processes belonging to 13824
[2026-04-28 23:44:25] 2026-04-28 21:43:32,678 | INFO     | Ready for new job
[2026-04-28 23:44:25] 2026-04-28 21:43:32,679 | INFO     | ***************************************
[2026-04-28 23:44:25] 2026-04-28 21:43:32,680 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 23:44:25] 2026-04-28 21:43:32,680 | INFO     | ***************************************
[2026-04-28 23:44:25] 2026-04-28 21:43:32,680 | INFO     | 
[2026-04-28 23:44:25] 2026-04-28 21:43:32,681 | INFO     | pilot is running in a VM
[2026-04-28 23:44:25] 2026-04-28 21:43:32,681 | INFO     | architecture information:
[2026-04-28 23:44:25] 2026-04-28 21:43:32,689 | INFO     | executing command: cat /etc/os-release
[2026-04-28 23:44:25] 2026-04-28 21:43:32,863 | INFO     | cat /etc/os-release:
[2026-04-28 23:44:25] NAME="CentOS Linux"
[2026-04-28 23:44:25] VERSION="7 (Core)"
[2026-04-28 23:44:25] ID="centos"
[2026-04-28 23:44:25] ID_LIKE="rhel fedora"
[2026-04-28 23:44:25] VERSION_ID="7"
[2026-04-28 23:44:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 23:44:25] ANSI_COLOR="0;31"
[2026-04-28 23:44:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 23:44:25] HOME_URL="https://www.centos.org/"
[2026-04-28 23:44:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 23:44:25] 
[2026-04-28 23:44:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 23:44:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 23:44:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 23:44:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 23:44:25] 
[2026-04-28 23:44:25] 2026-04-28 21:43:32,863 | INFO     | ***************************************
[2026-04-28 23:44:25] 2026-04-28 21:43:33,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-28 23:44:25] 2026-04-28 21:43:33,594 | INFO     | sufficient remaining disk space (494079574016 B)
[2026-04-28 23:44:25] 2026-04-28 21:43:33,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 23:44:25] 2026-04-28 21:43:33,595 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 23:44:25] 2026-04-28 21:43:33,595 | INFO     | update_server=False
[2026-04-28 23:44:25] 2026-04-28 21:43:33,595 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 23:44:25] 2026-04-28 21:43:33,826 | INFO     | all data control threads have been joined
[2026-04-28 23:44:25] 2026-04-28 21:43:34,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 23:44:25] 2026-04-28 21:43:34,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 23:44:25] 2026-04-28 21:43:34,163 | INFO     | aborting loop
[2026-04-28 23:44:25] 2026-04-28 21:43:34,601 | INFO     | [job] retrieve thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:34,785 | INFO     | all payload control threads have been joined
[2026-04-28 23:44:25] 2026-04-28 21:43:34,833 | INFO     | [data] control thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:34,848 | INFO     | [payload] validate_post thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 23:44:25] 2026-04-28 21:43:35,143 | INFO     | [data] copytool_in thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,169 | INFO     | [job] job monitor thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,182 | INFO     | [payload] failed_post thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,235 | INFO     | all job control threads have been joined
[2026-04-28 23:44:25] 2026-04-28 21:43:35,488 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 23:44:25] 2026-04-28 21:43:35,656 | INFO     | [job] validate thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,718 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:35,792 | INFO     | [payload] control thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:36,047 | INFO     | [data] copytool_out thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:36,084 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:36,125 | INFO     | [job] queue monitor thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:36,242 | INFO     | [job] control thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:39,583 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:43:44,443 | INFO     | job.realtimelogging is not enabled
[2026-04-28 23:44:25] 2026-04-28 21:43:45,450 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 23:44:25] 2026-04-28 21:44:02,645 | INFO     | PID=9307 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-28 23:44:25] 2026-04-28 21:44:02,645 | INFO     | .. there are 2 such processes running
[2026-04-28 23:44:25] 2026-04-28 21:44:02,646 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 23:44:25] 2026-04-28 21:44:02,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 23:44:25] 2026-04-28 21:44:02,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 23:44:25] 2026-04-28 21:44:13,145 | INFO     | [monitor] cgroup control has ended
[2026-04-28 23:44:25] 2026-04-28 21:44:14,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328313222976)>', '<ExcThread(monitor, started 140328015210240)>']
[2026-04-28 23:44:25] 2026-04-28 21:44:14,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 23:44:25] 2026-04-28 21:44:14,718 | INFO     | [monitor] control thread has ended
[2026-04-28 23:44:25] 2026-04-28 21:44:19,595 | INFO     | all workflow threads have been joined
[2026-04-28 23:44:25] 2026-04-28 21:44:19,596 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 23:44:25] 2026-04-28 21:44:19,596 | INFO     | traces error code: 0
[2026-04-28 23:44:25] 2026-04-28 21:44:19,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 23:44:25] 2026-04-28 21:44:19,993 [wrapper] ==== pilot stdout END ====
[2026-04-28 23:44:25] 2026-04-28 21:44:20,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 23:44:25] 2026-04-28 21:44:20,221 [wrapper] pilotpid: 9307
[2026-04-28 23:44:25] 2026-04-28 21:44:20,284 [wrapper] Pilot exit status: 0
[2026-04-28 23:44:25] 2026-04-28 21:44:20,611 [wrapper] pandaids: 7116245586
[2026-04-28 23:44:25] 2026-04-28 21:44:21,741 [wrapper] cleanup supervisor_pilot 20672 9308
[2026-04-28 23:44:25] 2026-04-28 21:44:21,840 [wrapper] Test setup, not cleaning
[2026-04-28 23:44:25] 2026-04-28 21:44:21,947 [wrapper] apfmon messages muted
[2026-04-28 23:44:25] 2026-04-28 21:44:22,049 [wrapper] ==== wrapper stdout END ====
[2026-04-28 23:44:25] 2026-04-28 21:44:22,157 [wrapper] ==== wrapper stderr END ====
[2026-04-28 23:44:25]  *** Error codes and diagnostics ***
[2026-04-28 23:44:25]     "exeErrorCode": 0,
[2026-04-28 23:44:25]     "pilotErrorCode": 0,
[2026-04-28 23:44:25]  *** Listing of results directory ***
[2026-04-28 23:44:25] total 626612
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc    683926 Apr 28 02:34 pilot3.tar.gz
[2026-04-28 23:44:25] -rwx------. 1 boinc boinc     36322 Apr 28 02:37 runpilot2-wrapper.sh
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc      5631 Apr 28 02:38 queuedata.json
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc       100 Apr 28 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 23:44:25] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 19:15 run_atlas
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc       105 Apr 28 19:15 job.xml
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc      6305 Apr 28 19:15 init_data.xml
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc 446300305 Apr 28 19:15 EVNT.46373187._000027.pool.root.1
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc     15667 Apr 28 19:15 start_atlas.sh
[2026-04-28 23:44:25] drwxrwx--x. 2 boinc boinc        68 Apr 28 19:15 shared
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc    697424 Apr 28 19:15 input.tar.gz
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc         0 Apr 28 19:15 boinc_lockfile
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc      2594 Apr 28 19:15 pandaJob.out
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc       415 Apr 28 19:22 workernode_map.json
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc   1001823 Apr 28 19:22 agis_schedconf.cvmfs.json
[2026-04-28 23:44:25] drwx------. 5 boinc boinc      4096 Apr 28 19:22 pilot3
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc 187493594 Apr 28 23:41 HITS.49718416._012365.pool.root.1
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc       490 Apr 28 23:42 boinc_task_state.xml
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc        95 Apr 28 23:43 pilot_heartbeat.json
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc      1024 Apr 28 23:43 memory_monitor_summary.json
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc   1512704 Apr 28 23:43 agis_ddmendpoints.agis.ALL.json
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc    415285 Apr 28 23:43 log.49718416._012365.job.log.tgz.1
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc      6337 Apr 28 23:43 heartbeat_new.json
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc      6228 Apr 28 23:43 heartbeat.json
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc      8192 Apr 28 23:43 boinc_mmap_file
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc        28 Apr 28 23:43 wrapper_checkpoint.txt
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc      4954 Apr 28 23:44 pilotlog.txt
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc   1447959 Apr 28 23:44 log.49718416._012365.job.log.1
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc       357 Apr 28 23:44 output.list
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc       410 Apr 28 23:44 runtime_log
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc   1884160 Apr 28 23:44 result.tar.gz
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc      8439 Apr 28 23:44 runtime_log.err
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc       655 Apr 28 23:44 015ec47e54e1.diag
[2026-04-28 23:44:25] -rw-r--r--. 1 boinc boinc     20632 Apr 28 23:44 stderr.txt
[2026-04-28 23:44:25] HITS file was successfully produced:
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc 187493594 Apr 28 23:41 shared/HITS.pool.root.1
[2026-04-28 23:44:25]  *** Contents of shared directory: ***
[2026-04-28 23:44:25] total 621484
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc 446300305 Apr 28 19:15 ATLAS.root_0
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc     15667 Apr 28 19:15 start_atlas.sh
[2026-04-28 23:44:25] -rw-r--r--. 2 boinc boinc    697424 Apr 28 19:15 input.tar.gz
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc 187493594 Apr 28 23:41 HITS.pool.root.1
[2026-04-28 23:44:25] -rw-------. 1 boinc boinc   1884160 Apr 28 23:44 result.tar.gz
23:44:27 (5320): run_atlas exited; CPU time 57914.110239
23:44:27 (5320): called boinc_finish(0)

</stderr_txt>
]]>

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