Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:59 (5158): wrapper (7.7.26015): starting
14:48:59 (5158): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 14:48:59] Arguments: --nthreads 8
[2026-04-28 14:48:59] Threads: 8
[2026-04-28 14:48:59] Checking for CVMFS
[2026-04-28 14:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 14:49:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 14:49:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 14:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 14:49:05] 2.11.2.0 32409 18456 100864 158967 0 53 17659951 25165825 96 130560 0 5813806 99.932 4856335 9586 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 14:49:05] CVMFS is ok
[2026-04-28 14:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 14:49:05] Checking for apptainer binary...
[2026-04-28 14:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 14:49:05] Running /usr/bin/apptainer --version
[2026-04-28 14:49:05] apptainer version 1.3.2-1.el7
[2026-04-28 14:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 14:49:25] cg-vwn411.simple-grid.lan
[2026-04-28 14:49:25] apptainer works
[2026-04-28 14:49:26] Set ATHENA_PROC_NUMBER=8
[2026-04-28 14:49:26] Set ATHENA_CORE_NUMBER=8
[2026-04-28 14:49:26] Starting ATLAS job with PandaID=7116292481
[2026-04-28 14:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 20:33:56]  *** The last 200 lines of the pilot log: ***
[2026-04-28 20:33:56] 2026-04-28 18:33:01,946 | INFO     | this job has now completed (state=finished)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,946 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,947 | INFO     | log transfer has been attempted: DONE
[2026-04-28 20:33:56] 2026-04-28 18:33:01,947 | INFO     | job 7116292481 has finished - writing final server update
[2026-04-28 20:33:56] 2026-04-28 18:33:01,947 | INFO     | total number of processed events: 400 (read)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,950 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7116292481/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,950 | INFO     | extracted standard info from prmon json
[2026-04-28 20:33:56] 2026-04-28 18:33:01,950 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 20:33:56] 2026-04-28 18:33:01,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 20:33:56] 2026-04-28 18:33:01,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 20:33:56] 2026-04-28 18:33:01,958 | INFO     | fitting pss+swap vs Time
[2026-04-28 20:33:56] 2026-04-28 18:33:01,959 | INFO     | sum of square deviations: 10644478650.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,962 | INFO     | sum of deviations: 178917964850.99997
[2026-04-28 20:33:56] 2026-04-28 18:33:01,962 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,962 | INFO     | mean y: 2447970.476923077
[2026-04-28 20:33:56] 2026-04-28 18:33:01,963 | INFO     | intersect: 2447970.476923077
[2026-04-28 20:33:56] 2026-04-28 18:33:01,963 | INFO     | chi2: 9.609115015818638
[2026-04-28 20:33:56] 2026-04-28 18:33:01,964 | INFO     | sum of square deviations: 10160711440.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,967 | INFO     | sum of deviations: 219937596234.5
[2026-04-28 20:33:56] 2026-04-28 18:33:01,967 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,968 | INFO     | mean y: 2460771.071875
[2026-04-28 20:33:56] 2026-04-28 18:33:01,968 | INFO     | intersect: 2460771.071875
[2026-04-28 20:33:56] 2026-04-28 18:33:01,968 | INFO     | chi2: 8.093654321799038
[2026-04-28 20:33:56] 2026-04-28 18:33:01,968 | INFO     | current chi2=8.093654321799038 (change=15.771074563316507 %)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,969 | INFO     | right removable region: 319
[2026-04-28 20:33:56] 2026-04-28 18:33:01,969 | INFO     | sum of square deviations: 10160711440.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,976 | INFO     | sum of deviations: 64288447597.00001
[2026-04-28 20:33:56] 2026-04-28 18:33:01,976 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,976 | INFO     | mean y: 2484089.2375
[2026-04-28 20:33:56] 2026-04-28 18:33:01,976 | INFO     | intersect: 2484089.2375
[2026-04-28 20:33:56] 2026-04-28 18:33:01,977 | INFO     | chi2: 4.673553964934408
[2026-04-28 20:33:56] 2026-04-28 18:33:01,977 | INFO     | current chi2=4.673553964934408 (change=51.363325787642786 %)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,978 | INFO     | sum of square deviations: 9691828230.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,981 | INFO     | sum of deviations: -24288526952.999996
[2026-04-28 20:33:56] 2026-04-28 18:33:01,981 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,981 | INFO     | mean y: 2512871.1555555556
[2026-04-28 20:33:56] 2026-04-28 18:33:01,982 | INFO     | intersect: 2512871.1555555556
[2026-04-28 20:33:56] 2026-04-28 18:33:01,982 | INFO     | chi2: 1.903822867110124
[2026-04-28 20:33:56] 2026-04-28 18:33:01,982 | INFO     | current chi2=1.903822867110124 (change=59.26391603917548 %)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,983 | INFO     | sum of square deviations: 9237596457.5
[2026-04-28 20:33:56] 2026-04-28 18:33:01,986 | INFO     | sum of deviations: -48058008871.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,986 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,987 | INFO     | mean y: 2520835.1354838707
[2026-04-28 20:33:56] 2026-04-28 18:33:01,987 | INFO     | intersect: 2520835.1354838707
[2026-04-28 20:33:56] 2026-04-28 18:33:01,987 | INFO     | chi2: 1.6850333143772178
[2026-04-28 20:33:56] 2026-04-28 18:33:01,987 | INFO     | current chi2=1.6850333143772178 (change=11.492117072057978 %)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,988 | INFO     | left removable region: 15
[2026-04-28 20:33:56] 2026-04-28 18:33:01,988 | INFO     | sum of square deviations: 8711530780.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,991 | INFO     | sum of deviations: -5546920777.500002
[2026-04-28 20:33:56] 2026-04-28 18:33:01,991 | INFO     | mean x (centered): 0.0
[2026-04-28 20:33:56] 2026-04-28 18:33:01,992 | INFO     | mean y: 2535431.759868421
[2026-04-28 20:33:56] 2026-04-28 18:33:01,992 | INFO     | intersect: 2535431.759868421
[2026-04-28 20:33:56] 2026-04-28 18:33:01,992 | INFO     | chi2: 0.035135702461692356
[2026-04-28 20:33:56] 2026-04-28 18:33:01,992 | INFO     | current memory leak: -0.64 B/s (using 304 data points, chi2=0.04)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,993 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-28 20:33:56] 2026-04-28 18:33:01,997 | INFO     | ..............................
[2026-04-28 20:33:56] 2026-04-28 18:33:01,997 | INFO     | . Timing measurements:
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . get job = 1 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . initial setup = 147 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . payload setup = 226 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . stage-in = 0 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . payload execution = 19896 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . stage-out = 3 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | . log creation = 1 s
[2026-04-28 20:33:56] 2026-04-28 18:33:01,998 | INFO     | ..............................
[2026-04-28 20:33:56] 2026-04-28 18:33:02,214 | INFO     | 
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | job summary report
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | --------------------------------------------------
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | PanDA job id: 7116292481
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | task id: 49863869
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | errors: (none)
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | pilot state: finished 
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | transexitcode: 0
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | exeerrorcode: 0
[2026-04-28 20:33:56] 2026-04-28 18:33:02,215 | INFO     | exeerrordiag: 
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | exitcode: 0
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | exitmsg: OK
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | cpuconsumptiontime: 81652 s
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | nevents: 400
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | neventsw: 0
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | pid: 13640
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | pgrp: 13640
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | corecount: 8
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | event service: False
[2026-04-28 20:33:56] 2026-04-28 18:33:02,216 | INFO     | sizes: {0: 2280601, 1: 2280685, 2: 2248483, 3: 2282514, 13: 2282542, 20128: 2316024, 20131: 2325022, 20134: 2325078, 20136: 2325272}
[2026-04-28 20:33:56] 2026-04-28 18:33:02,217 | INFO     | --------------------------------------------------
[2026-04-28 20:33:56] 2026-04-28 18:33:02,217 | INFO     | 
[2026-04-28 20:33:56] 2026-04-28 18:33:02,217 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-28 20:33:56] 2026-04-28 18:33:02,723 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 20:33:56] 2026-04-28 18:33:02,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,726 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 20:33:57] 2026-04-28 18:33:02,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,726 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 20:33:57] 2026-04-28 18:33:02,726 | INFO     | job 7116292481 has completed (purged errors)
[2026-04-28 20:33:57] 2026-04-28 18:33:02,726 | INFO     | overall cleanup function is called
[2026-04-28 20:33:57] 2026-04-28 18:33:03,735 | INFO     | --- collectZombieJob: --- 10, [13640]
[2026-04-28 20:33:57] 2026-04-28 18:33:03,736 | INFO     | zombie collector waiting for pid 13640
[2026-04-28 20:33:57] 2026-04-28 18:33:03,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 20:33:57] 2026-04-28 18:33:03,736 | INFO     | collected zombie processes
[2026-04-28 20:33:57] 2026-04-28 18:33:03,736 | INFO     | will attempt to kill all subprocesses of pid=13640
[2026-04-28 20:33:57] 2026-04-28 18:33:03,801 | INFO     | process IDs to be killed: [13640] (in reverse order)
[2026-04-28 20:33:57] 2026-04-28 18:33:04,712 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 20:33:57] 2026-04-28 18:33:04,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 20:33:57] 2026-04-28 18:33:04,714 | INFO     | did not find any defunct processes belonging to 13640
[2026-04-28 20:33:57] 2026-04-28 18:33:04,716 | INFO     | did not find any defunct processes belonging to 13640
[2026-04-28 20:33:57] 2026-04-28 18:33:04,717 | INFO     | Ready for new job
[2026-04-28 20:33:57] 2026-04-28 18:33:04,719 | INFO     | ***************************************
[2026-04-28 20:33:57] 2026-04-28 18:33:04,719 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 20:33:57] 2026-04-28 18:33:04,719 | INFO     | ***************************************
[2026-04-28 20:33:57] 2026-04-28 18:33:04,719 | INFO     | 
[2026-04-28 20:33:57] 2026-04-28 18:33:04,720 | INFO     | pilot is running in a VM
[2026-04-28 20:33:57] 2026-04-28 18:33:04,720 | INFO     | architecture information:
[2026-04-28 20:33:57] 2026-04-28 18:33:04,739 | INFO     | executing command: cat /etc/os-release
[2026-04-28 20:33:57] 2026-04-28 18:33:05,013 | INFO     | cat /etc/os-release:
[2026-04-28 20:33:57] NAME="CentOS Linux"
[2026-04-28 20:33:57] VERSION="7 (Core)"
[2026-04-28 20:33:57] ID="centos"
[2026-04-28 20:33:57] ID_LIKE="rhel fedora"
[2026-04-28 20:33:57] VERSION_ID="7"
[2026-04-28 20:33:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 20:33:57] ANSI_COLOR="0;31"
[2026-04-28 20:33:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 20:33:57] HOME_URL="https://www.centos.org/"
[2026-04-28 20:33:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 20:33:57] 
[2026-04-28 20:33:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 20:33:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 20:33:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 20:33:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 20:33:57] 
[2026-04-28 20:33:57] 2026-04-28 18:33:05,013 | INFO     | ***************************************
[2026-04-28 20:33:57] 2026-04-28 18:33:05,517 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-28 20:33:57] 2026-04-28 18:33:05,777 | INFO     | sufficient remaining disk space (492665044992 B)
[2026-04-28 20:33:57] 2026-04-28 18:33:05,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 20:33:57] 2026-04-28 18:33:05,777 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 20:33:57] 2026-04-28 18:33:05,777 | INFO     | update_server=False
[2026-04-28 20:33:57] 2026-04-28 18:33:05,778 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 20:33:57] 2026-04-28 18:33:05,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 20:33:57] 2026-04-28 18:33:05,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 20:33:57] 2026-04-28 18:33:05,779 | INFO     | aborting loop
[2026-04-28 20:33:57] 2026-04-28 18:33:06,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 20:33:57] 2026-04-28 18:33:06,334 | INFO     | all payload control threads have been joined
[2026-04-28 20:33:57] 2026-04-28 18:33:06,378 | INFO     | all data control threads have been joined
[2026-04-28 20:33:57] 2026-04-28 18:33:06,783 | INFO     | [job] retrieve thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:06,784 | INFO     | [job] job monitor thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 20:33:57] 2026-04-28 18:33:07,275 | INFO     | all job control threads have been joined
[2026-04-28 20:33:57] 2026-04-28 18:33:07,340 | INFO     | [payload] control thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,347 | INFO     | [job] validate thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,384 | INFO     | [data] control thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,554 | INFO     | [payload] validate_post thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,785 | INFO     | [data] copytool_out thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:07,967 | INFO     | [payload] failed_post thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,085 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,088 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,123 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,130 | INFO     | [data] copytool_in thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,232 | INFO     | [job] queue monitor thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:08,281 | INFO     | [job] control thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:10,271 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 20:33:57] 2026-04-28 18:33:35,176 | INFO     | PID=9170 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-28 20:33:57] 2026-04-28 18:33:35,177 | INFO     | .. there are 2 such processes running
[2026-04-28 20:33:57] 2026-04-28 18:33:35,184 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 20:33:57] 2026-04-28 18:33:35,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 20:33:57] 2026-04-28 18:33:35,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 20:33:57] 2026-04-28 18:33:45,663 | INFO     | [monitor] cgroup control has ended
[2026-04-28 20:33:57] 2026-04-28 18:33:46,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170025555776)>', '<ExcThread(monitor, started 140169579575040)>']
[2026-04-28 20:33:57] 2026-04-28 18:33:46,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 20:33:57] 2026-04-28 18:33:46,251 | INFO     | [monitor] control thread has ended
[2026-04-28 20:33:57] 2026-04-28 18:33:51,258 | INFO     | all workflow threads have been joined
[2026-04-28 20:33:57] 2026-04-28 18:33:51,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 20:33:57] 2026-04-28 18:33:51,259 | INFO     | traces error code: 0
[2026-04-28 20:33:57] 2026-04-28 18:33:51,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 20:33:57] 2026-04-28 18:33:51,829 [wrapper] ==== pilot stdout END ====
[2026-04-28 20:33:57] 2026-04-28 18:33:51,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 20:33:57] 2026-04-28 18:33:52,015 [wrapper] pilotpid: 9170
[2026-04-28 20:33:57] 2026-04-28 18:33:52,140 [wrapper] Pilot exit status: 0
[2026-04-28 20:33:57] 2026-04-28 18:33:52,653 [wrapper] pandaids: 7116292481
[2026-04-28 20:33:57] 2026-04-28 18:33:53,612 [wrapper] cleanup supervisor_pilot 32641 9171
[2026-04-28 20:33:57] 2026-04-28 18:33:53,747 [wrapper] Test setup, not cleaning
[2026-04-28 20:33:57] 2026-04-28 18:33:53,851 [wrapper] apfmon messages muted
[2026-04-28 20:33:57] 2026-04-28 18:33:53,958 [wrapper] ==== wrapper stdout END ====
[2026-04-28 20:33:57] 2026-04-28 18:33:54,072 [wrapper] ==== wrapper stderr END ====
[2026-04-28 20:33:57]  *** Error codes and diagnostics ***
[2026-04-28 20:33:57]     "exeErrorCode": 0,
[2026-04-28 20:33:57]     "pilotErrorCode": 0,
[2026-04-28 20:33:57]  *** Listing of results directory ***
[2026-04-28 20:33:57] total 466996
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc    683926 Apr 27 23:55 pilot3.tar.gz
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc      5631 Apr 28 00:43 queuedata.json
[2026-04-28 20:33:57] -rwx------. 1 boinc boinc     36322 Apr 28 00:43 runpilot2-wrapper.sh
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc       100 Apr 28 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 20:33:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 14:48 run_atlas
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc       105 Apr 28 14:48 job.xml
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc      6306 Apr 28 14:48 init_data.xml
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc 258391251 Apr 28 14:48 EVNT.49863867._000031.pool.root.1
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc     15667 Apr 28 14:48 start_atlas.sh
[2026-04-28 20:33:57] drwxrwx--x. 2 boinc boinc        68 Apr 28 14:48 shared
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc    697412 Apr 28 14:48 input.tar.gz
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc         0 Apr 28 14:48 boinc_lockfile
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc      2572 Apr 28 14:49 pandaJob.out
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc       415 Apr 28 14:57 workernode_map.json
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc    993626 Apr 28 14:57 agis_schedconf.cvmfs.json
[2026-04-28 20:33:57] drwx------. 5 boinc boinc      4096 Apr 28 14:57 pilot3
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc 211061851 Apr 28 20:31 HITS.49863869._000773.pool.root.1
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc       489 Apr 28 20:31 boinc_task_state.xml
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc      1021 Apr 28 20:32 memory_monitor_summary.json
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc   1512704 Apr 28 20:32 agis_ddmendpoints.agis.ALL.json
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc    460017 Apr 28 20:32 log.49863869._000773.job.log.tgz.1
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc      6343 Apr 28 20:33 heartbeat_new.json
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc      6234 Apr 28 20:33 heartbeat.json
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc        95 Apr 28 20:33 pilot_heartbeat.json
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc      8192 Apr 28 20:33 boinc_mmap_file
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc        28 Apr 28 20:33 wrapper_checkpoint.txt
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc      4882 Apr 28 20:33 pilotlog.txt
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc   1859164 Apr 28 20:33 log.49863869._000773.job.log.1
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc       357 Apr 28 20:33 output.list
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc       410 Apr 28 20:33 runtime_log
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc   2334720 Apr 28 20:33 result.tar.gz
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc      8439 Apr 28 20:33 runtime_log.err
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc       656 Apr 28 20:33 e6a32a4a7e03.diag
[2026-04-28 20:33:57] -rw-r--r--. 1 boinc boinc     20634 Apr 28 20:33 stderr.txt
[2026-04-28 20:33:57] HITS file was successfully produced:
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc 211061851 Apr 28 20:31 shared/HITS.pool.root.1
[2026-04-28 20:33:57]  *** Contents of shared directory: ***
[2026-04-28 20:33:57] total 461432
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc 258391251 Apr 28 14:48 ATLAS.root_0
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc     15667 Apr 28 14:48 start_atlas.sh
[2026-04-28 20:33:57] -rw-r--r--. 2 boinc boinc    697412 Apr 28 14:48 input.tar.gz
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc 211061851 Apr 28 20:31 HITS.pool.root.1
[2026-04-28 20:33:57] -rw-------. 1 boinc boinc   2334720 Apr 28 20:33 result.tar.gz
20:33:58 (5158): run_atlas exited; CPU time 81853.123612
20:33:58 (5158): called boinc_finish(0)

</stderr_txt>
]]>

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