Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:38 (2685109): wrapper (7.7.26015): starting
23:00:38 (2685109): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 23:00:38] Arguments: --nthreads 8
[2026-04-27 23:00:38] Threads: 8
[2026-04-27 23:00:38] Checking for CVMFS
[2026-04-27 23:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 23:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 23:00:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 23:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 23:00:41] 2.13.3.0 13170 663 109684 158950 1 437 40132262 40960001 28256 16776704 0 2508816 99.725 1708534 32278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-27 23:00:41] CVMFS is ok
[2026-04-27 23:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 23:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 23:00:41] Further information can be found at the LHC@home message board.
[2026-04-27 23:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 23:00:41] Checking for apptainer binary...
[2026-04-27 23:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 23:00:41] Running /usr/bin/apptainer --version
[2026-04-27 23:00:41] apptainer version 1.4.5-3.el9
[2026-04-27 23:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 23:00:41] c6-8-12-2.aglt2.org
[2026-04-27 23:00:41] apptainer works
[2026-04-27 23:00:41] Set ATHENA_PROC_NUMBER=8
[2026-04-27 23:00:41] Set ATHENA_CORE_NUMBER=8
[2026-04-27 23:00:42] Starting ATLAS job with PandaID=7116286248
[2026-04-27 23:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 17:38:46]  *** The last 200 lines of the pilot log: ***
[2026-04-28 17:38:46] 2026-04-28 21:37:57,563 | INFO     | extracted standard info from prmon json
[2026-04-28 17:38:46] 2026-04-28 21:37:57,563 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 17:38:46] 2026-04-28 21:37:57,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 17:38:46] 2026-04-28 21:37:57,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 17:38:46] 2026-04-28 21:37:57,694 | INFO     | fitting pss+swap vs Time
[2026-04-28 17:38:46] 2026-04-28 21:37:57,695 | INFO     | sum of square deviations: 408230438943.9399
[2026-04-28 17:38:46] 2026-04-28 21:37:57,744 | INFO     | sum of deviations: 1021684891457.3643
[2026-04-28 17:38:46] 2026-04-28 21:37:57,745 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:57,745 | INFO     | mean y: 2551527.488138686
[2026-04-28 17:38:46] 2026-04-28 21:37:57,745 | INFO     | intersect: 2551527.488138686
[2026-04-28 17:38:46] 2026-04-28 21:37:57,746 | INFO     | chi2: 5.73304312966116
[2026-04-28 17:38:46] 2026-04-28 21:37:57,747 | INFO     | sum of square deviations: 402668702882.0881
[2026-04-28 17:38:46] 2026-04-28 21:37:57,788 | INFO     | sum of deviations: 1172122420832.4517
[2026-04-28 17:38:46] 2026-04-28 21:37:57,788 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:57,788 | INFO     | mean y: 2555640.7241063244
[2026-04-28 17:38:46] 2026-04-28 21:37:57,789 | INFO     | intersect: 2555640.7241063244
[2026-04-28 17:38:46] 2026-04-28 21:37:57,794 | INFO     | chi2: 4.088216547030823
[2026-04-28 17:38:46] 2026-04-28 21:37:57,794 | INFO     | current chi2=4.088216547030823 (change=28.690287957550236 %)
[2026-04-28 17:38:46] 2026-04-28 21:37:57,795 | INFO     | sum of square deviations: 397157645161.94965
[2026-04-28 17:38:46] 2026-04-28 21:37:57,833 | INFO     | sum of deviations: 1165065745440.2754
[2026-04-28 17:38:46] 2026-04-28 21:37:57,833 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:57,833 | INFO     | mean y: 2555445.4484346225
[2026-04-28 17:38:46] 2026-04-28 21:37:57,833 | INFO     | intersect: 2555445.4484346225
[2026-04-28 17:38:46] 2026-04-28 21:37:57,838 | INFO     | chi2: 4.087420977177547
[2026-04-28 17:38:46] 2026-04-28 21:37:57,839 | INFO     | current chi2=4.087420977177547 (change=0.01946007125905479 %)
[2026-04-28 17:38:46] 2026-04-28 21:37:57,839 | INFO     | right removable region: 1085
[2026-04-28 17:38:46] 2026-04-28 21:37:57,840 | INFO     | sum of square deviations: 402668766444.0882
[2026-04-28 17:38:46] 2026-04-28 21:37:57,882 | INFO     | sum of deviations: 714627820199.2004
[2026-04-28 17:38:46] 2026-04-28 21:37:57,882 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:57,882 | INFO     | mean y: 2559942.6122823097
[2026-04-28 17:38:46] 2026-04-28 21:37:57,882 | INFO     | intersect: 2559942.6122823097
[2026-04-28 17:38:46] 2026-04-28 21:37:57,883 | INFO     | chi2: 3.0265652494087343
[2026-04-28 17:38:46] 2026-04-28 21:37:57,883 | INFO     | current chi2=3.0265652494087343 (change=47.20839908302568 %)
[2026-04-28 17:38:46] 2026-04-28 21:37:57,886 | INFO     | sum of square deviations: 397157838959.7416
[2026-04-28 17:38:46] 2026-04-28 21:37:57,981 | INFO     | sum of deviations: 547285985383.5294
[2026-04-28 17:38:46] 2026-04-28 21:37:57,981 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:57,981 | INFO     | mean y: 2564570.2430939227
[2026-04-28 17:38:46] 2026-04-28 21:37:57,981 | INFO     | intersect: 2564570.2430939227
[2026-04-28 17:38:46] 2026-04-28 21:37:57,988 | INFO     | chi2: 2.247517374201209
[2026-04-28 17:38:46] 2026-04-28 21:37:57,988 | INFO     | current chi2=2.247517374201209 (change=25.740329747053003 %)
[2026-04-28 17:38:46] 2026-04-28 21:37:57,989 | INFO     | sum of square deviations: 391697490295.60187
[2026-04-28 17:38:46] 2026-04-28 21:37:58,028 | INFO     | sum of deviations: 476848494553.0361
[2026-04-28 17:38:46] 2026-04-28 21:37:58,028 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,028 | INFO     | mean y: 2566537.1258094357
[2026-04-28 17:38:46] 2026-04-28 21:37:58,028 | INFO     | intersect: 2566537.1258094357
[2026-04-28 17:38:46] 2026-04-28 21:37:58,030 | INFO     | chi2: 2.132846202926699
[2026-04-28 17:38:46] 2026-04-28 21:37:58,030 | INFO     | current chi2=2.132846202926699 (change=5.102126132184647 %)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,030 | INFO     | left removable region: 15
[2026-04-28 17:38:46] 2026-04-28 21:37:58,035 | INFO     | sum of square deviations: 379861042576.5995
[2026-04-28 17:38:46] 2026-04-28 21:37:58,074 | INFO     | sum of deviations: 622316632729.0692
[2026-04-28 17:38:46] 2026-04-28 21:37:58,074 | INFO     | mean x (centered): 0.0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,074 | INFO     | mean y: 2570623.929906542
[2026-04-28 17:38:46] 2026-04-28 21:37:58,074 | INFO     | intersect: 2570623.929906542
[2026-04-28 17:38:46] 2026-04-28 21:37:58,075 | INFO     | chi2: 0.4704132486774839
[2026-04-28 17:38:46] 2026-04-28 21:37:58,080 | INFO     | current memory leak: 1.64 B/s (using 1070 data points, chi2=0.47)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | could have reported an average CPU frequency of 3188 MHz (40 samples)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | ..............................
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . Timing measurements:
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . get job = 1 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . initial setup = 41 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . payload setup = 48 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . stage-in = 0 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . payload execution = 66856 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . stage-out = 3 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,081 | INFO     | . log creation = 0 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,082 | INFO     | ..............................
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | 
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | job summary report
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | --------------------------------------------------
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | PanDA job id: 7116286248
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | task id: 49820244
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | errors: (none)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | pilot state: finished 
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | transexitcode: 0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,499 | INFO     | exeerrorcode: 0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | exeerrordiag: 
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | exitcode: 0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | exitmsg: OK
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | cpuconsumptiontime: 71743 s
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | nevents: 400
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | neventsw: 0
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | pid: 2696631
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | pgrp: 2696631
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | corecount: 8
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | event service: False
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | sizes: {0: 2280023, 1: 2280624, 2: 2280736, 3: 2280991, 4: 2280991, 5: 2282565, 15: 2282749, 66909: 2337357, 66910: 2337356, 66913: 2346466, 66916: 2346604}
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | --------------------------------------------------
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | 
[2026-04-28 17:38:46] 2026-04-28 21:37:58,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 17:38:46] 2026-04-28 21:37:58,552 | INFO     | job 7116286248 has completed (purged errors)
[2026-04-28 17:38:46] 2026-04-28 21:37:58,553 | INFO     | overall cleanup function is called
[2026-04-28 17:38:46] 2026-04-28 21:37:59,577 | INFO     | --- collectZombieJob: --- 10, [2696631]
[2026-04-28 17:38:46] 2026-04-28 21:37:59,578 | INFO     | zombie collector waiting for pid 2696631
[2026-04-28 17:38:46] 2026-04-28 21:37:59,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 17:38:46] 2026-04-28 21:37:59,578 | INFO     | collected zombie processes
[2026-04-28 17:38:46] 2026-04-28 21:37:59,578 | INFO     | will attempt to kill all subprocesses of pid=2696631
[2026-04-28 17:38:46] 2026-04-28 21:38:00,612 | INFO     | process IDs to be killed: [2696631] (in reverse order)
[2026-04-28 17:38:46] 2026-04-28 21:38:00,812 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 17:38:46] 2026-04-28 21:38:00,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 17:38:46] 2026-04-28 21:38:00,828 | INFO     | did not find any defunct processes belonging to 2696631
[2026-04-28 17:38:46] 2026-04-28 21:38:00,875 | INFO     | did not find any defunct processes belonging to 2696631
[2026-04-28 17:38:46] 2026-04-28 21:38:00,876 | INFO     | Ready for new job
[2026-04-28 17:38:46] 2026-04-28 21:38:00,910 | INFO     | ***************************************
[2026-04-28 17:38:46] 2026-04-28 21:38:00,910 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 17:38:46] 2026-04-28 21:38:00,910 | INFO     | ***************************************
[2026-04-28 17:38:46] 2026-04-28 21:38:00,910 | INFO     | 
[2026-04-28 17:38:46] 2026-04-28 21:38:00,913 | INFO     | architecture information:
[2026-04-28 17:38:46] 2026-04-28 21:38:00,950 | INFO     | executing command: cat /etc/os-release
[2026-04-28 17:38:46] 2026-04-28 21:38:01,034 | INFO     | cat /etc/os-release:
[2026-04-28 17:38:46] NAME="CentOS Linux"
[2026-04-28 17:38:46] VERSION="7 (Core)"
[2026-04-28 17:38:46] ID="centos"
[2026-04-28 17:38:46] ID_LIKE="rhel fedora"
[2026-04-28 17:38:46] VERSION_ID="7"
[2026-04-28 17:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 17:38:46] ANSI_COLOR="0;31"
[2026-04-28 17:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 17:38:46] HOME_URL="https://www.centos.org/"
[2026-04-28 17:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 17:38:46] 
[2026-04-28 17:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 17:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 17:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 17:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 17:38:46] 
[2026-04-28 17:38:46] 2026-04-28 21:38:01,034 | INFO     | ***************************************
[2026-04-28 17:38:46] 2026-04-28 21:38:01,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-28 17:38:46] 2026-04-28 21:38:01,614 | INFO     | sufficient remaining disk space (66020442112 B)
[2026-04-28 17:38:46] 2026-04-28 21:38:01,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 17:38:46] 2026-04-28 21:38:01,614 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 17:38:46] 2026-04-28 21:38:01,614 | INFO     | update_server=False
[2026-04-28 17:38:46] 2026-04-28 21:38:01,615 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 17:38:46] 2026-04-28 21:38:01,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 17:38:46] 2026-04-28 21:38:01,718 | INFO     | all job control threads have been joined
[2026-04-28 17:38:46] 2026-04-28 21:38:02,078 | INFO     | all data control threads have been joined
[2026-04-28 17:38:46] 2026-04-28 21:38:02,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 17:38:46] 2026-04-28 21:38:02,464 | INFO     | aborting loop
[2026-04-28 17:38:46] 2026-04-28 21:38:02,620 | INFO     | [job] retrieve thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:02,725 | INFO     | [job] control thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:02,816 | INFO     | all payload control threads have been joined
[2026-04-28 17:38:46] 2026-04-28 21:38:02,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 17:38:46] 2026-04-28 21:38:03,085 | INFO     | [data] control thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,203 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,470 | INFO     | [job] job monitor thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,474 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,474 | INFO     | [job] validate thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 17:38:46] 2026-04-28 21:38:03,540 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,580 | INFO     | [data] copytool_in thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,682 | INFO     | [payload] failed_post thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:03,822 | INFO     | [payload] control thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:04,067 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:04,211 | INFO     | [payload] validate_post thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:04,546 | INFO     | [job] queue monitor thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:04,980 | INFO     | [data] copytool_out thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:05,635 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 17:38:46] 2026-04-28 21:38:31,134 | INFO     | PID=2690041 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 17:38:46] 2026-04-28 21:38:31,134 | INFO     | .. there are 38 such processes running
[2026-04-28 17:38:46] 2026-04-28 21:38:31,134 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 17:38:46] 2026-04-28 21:38:31,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 17:38:46] 2026-04-28 21:38:31,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 17:38:46] 2026-04-28 21:38:36,242 | INFO     | [monitor] cgroup control has ended
[2026-04-28 17:38:46] 2026-04-28 21:38:38,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274298734400)>', '<ExcThread(monitor, started 140273791248128)>']
[2026-04-28 17:38:46] 2026-04-28 21:38:38,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 17:38:46] 2026-04-28 21:38:38,197 | INFO     | [monitor] control thread has ended
[2026-04-28 17:38:46] 2026-04-28 21:38:43,120 | INFO     | all workflow threads have been joined
[2026-04-28 17:38:46] 2026-04-28 21:38:43,121 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 17:38:46] 2026-04-28 21:38:43,121 | INFO     | traces error code: 0
[2026-04-28 17:38:46] 2026-04-28 21:38:43,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 17:38:46] 2026-04-28 21:38:44,346 [wrapper] ==== pilot stdout END ====
[2026-04-28 17:38:46] 2026-04-28 21:38:44,405 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 17:38:46] 2026-04-28 21:38:44,455 [wrapper] pilotpid: 2690041
[2026-04-28 17:38:46] 2026-04-28 21:38:44,520 [wrapper] Pilot exit status: 0
[2026-04-28 17:38:46] 2026-04-28 21:38:44,750 [wrapper] pandaids: 7116286248
[2026-04-28 17:38:46] 2026-04-28 21:38:45,943 [wrapper] cleanup supervisor_pilot 3141810 2690042
[2026-04-28 17:38:46] 2026-04-28 21:38:45,974 [wrapper] Test setup, not cleaning
[2026-04-28 17:38:46] 2026-04-28 21:38:46,018 [wrapper] apfmon messages muted
[2026-04-28 17:38:46] 2026-04-28 21:38:46,067 [wrapper] ==== wrapper stdout END ====
[2026-04-28 17:38:46] 2026-04-28 21:38:46,100 [wrapper] ==== wrapper stderr END ====
[2026-04-28 17:38:46]  *** Error codes and diagnostics ***
[2026-04-28 17:38:46]     "exeErrorCode": 0,
[2026-04-28 17:38:46]     "pilotErrorCode": 0,
[2026-04-28 17:38:46]  *** Listing of results directory ***
[2026-04-28 17:38:46] total 2460884
[2026-04-28 17:38:46] -rwx------. 1 boincer umatlas      36322 Apr 27 14:41 runpilot2-wrapper.sh
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas     683926 Apr 27 14:44 pilot3.tar.gz
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas       5631 Apr 27 14:44 queuedata.json
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas        100 Apr 27 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 17:38:46] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 27 23:00 run_atlas
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas        105 Apr 27 23:00 job.xml
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas 2230511963 Apr 27 23:00 EVNT.49820242._000061.pool.root.1
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 23:00 start_atlas.sh
[2026-04-28 17:38:46] drwxrwx--x. 2 boincer umatlas       4096 Apr 27 23:00 shared
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas     697406 Apr 27 23:00 input.tar.gz
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas          0 Apr 27 23:00 boinc_lockfile
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas       2551 Apr 27 23:00 pandaJob.out
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas         57 Apr 27 23:00 setup.sh.local
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas     997414 Apr 27 23:01 agis_schedconf.cvmfs.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas        440 Apr 27 23:02 workernode_map.json
[2026-04-28 17:38:46] drwx------. 5 boincer umatlas       4096 Apr 27 23:02 pilot3
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas        489 Apr 28 17:35 boinc_task_state.xml
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas  273201674 Apr 28 17:35 HITS.49820244._023161.pool.root.1
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas       6755 Apr 28 17:36 init_data.xml
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas       1042 Apr 28 17:37 memory_monitor_summary.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas         95 Apr 28 17:37 pilot_heartbeat.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas    1512704 Apr 28 17:37 agis_ddmendpoints.agis.ALL.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas     957148 Apr 28 17:37 log.49820244._023161.job.log.tgz.1
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas       6416 Apr 28 17:37 heartbeat_new.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas       6307 Apr 28 17:37 heartbeat.json
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas       4823 Apr 28 17:38 pilotlog.txt
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas       8192 Apr 28 17:38 boinc_mmap_file
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas         28 Apr 28 17:38 wrapper_checkpoint.txt
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas    5088157 Apr 28 17:38 log.49820244._023161.job.log.1
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas        357 Apr 28 17:38 output.list
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas        410 Apr 28 17:38 runtime_log
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas    6062080 Apr 28 17:38 result.tar.gz
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas       8970 Apr 28 17:38 runtime_log.err
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas        659 Apr 28 17:38 adecbb9f02c8.diag
[2026-04-28 17:38:46] -rw-r--r--. 1 boincer umatlas      20895 Apr 28 17:38 stderr.txt
[2026-04-28 17:38:46] HITS file was successfully produced:
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas 273201674 Apr 28 17:35 shared/HITS.pool.root.1
[2026-04-28 17:38:46]  *** Contents of shared directory: ***
[2026-04-28 17:38:46] total 2451664
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas 2230511963 Apr 27 23:00 ATLAS.root_0
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 23:00 start_atlas.sh
[2026-04-28 17:38:46] -rw-r--r--. 2 boincer umatlas     697406 Apr 27 23:00 input.tar.gz
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas  273201674 Apr 28 17:35 HITS.pool.root.1
[2026-04-28 17:38:46] -rw-------. 1 boincer umatlas    6062080 Apr 28 17:38 result.tar.gz
17:38:48 (2685109): run_atlas exited; CPU time 74037.995507
17:38:48 (2685109): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN