Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:03:35 (3314): wrapper (7.7.26015): starting
04:03:35 (3314): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 04:03:35] Arguments: --nthreads 4
[2026-04-28 04:03:35] Threads: 4
[2026-04-28 04:03:35] Checking for CVMFS
[2026-04-28 04:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 04:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 04:03:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 04:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 04:03:59] 2.11.5.0 3538 0 25112 158950 3 1 4033054 4194305 0 130560 0 0 0.000 1282 1210 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-04-28 04:03:59] CVMFS is ok
[2026-04-28 04:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 04:03:59] Checking for apptainer binary...
[2026-04-28 04:03:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 04:03:59] Running /usr/bin/apptainer --version
[2026-04-28 04:04:00] apptainer version 1.0.3
[2026-04-28 04:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 04:04:01] TeeC16
[2026-04-28 04:04:01] apptainer works
[2026-04-28 04:04:01] Set ATHENA_PROC_NUMBER=4
[2026-04-28 04:04:01] Set ATHENA_CORE_NUMBER=4
[2026-04-28 04:04:01] Starting ATLAS job with PandaID=7116245524
[2026-04-28 04:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 09:51:33]  *** The last 200 lines of the pilot log: ***
[2026-04-28 09:51:33] 2026-04-28 08:50:50,390 | WARNING  | process 12007 can no longer be monitored (due to stat problems) - aborting
[2026-04-28 09:51:33] 2026-04-28 08:50:50,390 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7116245524/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 09:51:33] 2026-04-28 08:50:50,437 | INFO     | number of running child processes to parent process 12007: 1
[2026-04-28 09:51:33] 2026-04-28 08:50:50,437 | INFO     | maximum number of monitored processes: 6
[2026-04-28 09:51:33] 2026-04-28 08:50:51,707 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 09:51:33] 2026-04-28 08:50:51,764 | INFO     | job 7116245524 has state=finished
[2026-04-28 09:51:33] 2026-04-28 08:50:51,765 | INFO     | preparing for final server update for job 7116245524 in state='finished'
[2026-04-28 09:51:33] 2026-04-28 08:50:51,765 | INFO     | reading metadata from: /home/m/BOINC/slots/1/PanDA_Pilot-7116245524/jobReport.json
[2026-04-28 09:51:33] 2026-04-28 08:50:51,767 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/1/workernode_map.json
[2026-04-28 09:51:33] 2026-04-28 08:50:51,767 | INFO     | this job has now completed (state=finished)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,768 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,768 | INFO     | log transfer has been attempted: DONE
[2026-04-28 09:51:33] 2026-04-28 08:50:51,768 | INFO     | job 7116245524 has finished - writing final server update
[2026-04-28 09:51:33] 2026-04-28 08:50:51,768 | INFO     | total number of processed events: 400 (read)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,786 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-7116245524/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,787 | INFO     | extracted standard info from prmon json
[2026-04-28 09:51:33] 2026-04-28 08:50:51,787 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 09:51:33] 2026-04-28 08:50:51,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 09:51:33] 2026-04-28 08:50:51,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 09:51:33] 2026-04-28 08:50:51,794 | INFO     | fitting pss+swap vs Time
[2026-04-28 09:51:33] 2026-04-28 08:50:51,795 | INFO     | sum of square deviations: 12187734009.18819
[2026-04-28 09:51:33] 2026-04-28 08:50:51,799 | INFO     | sum of deviations: 41026624876.011765
[2026-04-28 09:51:33] 2026-04-28 08:50:51,799 | INFO     | mean x (centered): 0.0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,799 | INFO     | mean y: 2344979.694117647
[2026-04-28 09:51:33] 2026-04-28 08:50:51,799 | INFO     | intersect: 2344979.694117647
[2026-04-28 09:51:33] 2026-04-28 08:50:51,800 | INFO     | chi2: 2.0919094586868083
[2026-04-28 09:51:33] 2026-04-28 08:50:51,801 | INFO     | sum of square deviations: 11657930404.131353
[2026-04-28 09:51:33] 2026-04-28 08:50:51,803 | INFO     | sum of deviations: 40322273593.149185
[2026-04-28 09:51:33] 2026-04-28 08:50:51,803 | INFO     | mean x (centered): 0.0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,803 | INFO     | mean y: 2344776.9402985075
[2026-04-28 09:51:33] 2026-04-28 08:50:51,803 | INFO     | intersect: 2344776.9402985075
[2026-04-28 09:51:33] 2026-04-28 08:50:51,803 | INFO     | chi2: 2.09258825395181
[2026-04-28 09:51:33] 2026-04-28 08:50:51,804 | INFO     | current chi2=2.09258825395181 (change=-0.03244859676803117 %)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,804 | INFO     | right removable region: 334
[2026-04-28 09:51:33] 2026-04-28 08:50:51,804 | INFO     | sum of square deviations: 11657908444.131353
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | sum of deviations: -24250832490.617886
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | mean x (centered): 0.0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | mean y: 2363699.767164179
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | intersect: 2363699.767164179
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | chi2: 0.2485445694004453
[2026-04-28 09:51:33] 2026-04-28 08:50:51,806 | INFO     | current chi2=0.2485445694004453 (change=88.11877022839847 %)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,807 | INFO     | sum of square deviations: 11143664566.57273
[2026-04-28 09:51:33] 2026-04-28 08:50:51,808 | INFO     | sum of deviations: -17302538721.0909
[2026-04-28 09:51:33] 2026-04-28 08:50:51,808 | INFO     | mean x (centered): 0.0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,808 | INFO     | mean y: 2361625.3636363638
[2026-04-28 09:51:33] 2026-04-28 08:50:51,809 | INFO     | intersect: 2361625.3636363638
[2026-04-28 09:51:33] 2026-04-28 08:50:51,809 | INFO     | chi2: 0.2238377921213823
[2026-04-28 09:51:33] 2026-04-28 08:50:51,809 | INFO     | current chi2=0.2238377921213823 (change=9.940582221797175 %)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,809 | INFO     | left removable region: 10
[2026-04-28 09:51:33] 2026-04-28 08:50:51,809 | INFO     | sum of square deviations: 10546838645.00002
[2026-04-28 09:51:33] 2026-04-28 08:50:51,811 | INFO     | sum of deviations: -17118836808.888897
[2026-04-28 09:51:33] 2026-04-28 08:50:51,811 | INFO     | mean x (centered): 0.0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,811 | INFO     | mean y: 2361681.6913580247
[2026-04-28 09:51:33] 2026-04-28 08:50:51,811 | INFO     | intersect: 2361681.6913580247
[2026-04-28 09:51:33] 2026-04-28 08:50:51,811 | INFO     | chi2: 0.2235865403898509
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | current memory leak: -1.62 B/s (using 324 data points, chi2=0.22)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | could have reported an average CPU frequency of 3292 MHz (15 samples)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | ..............................
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . Timing measurements:
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . get job = 0 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . initial setup = 11 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . payload setup = 10 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . stage-in = 0 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . payload execution = 20729 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . stage-out = 1 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | . log creation = 0 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,812 | INFO     | ..............................
[2026-04-28 09:51:33] 2026-04-28 08:50:51,866 | INFO     | 
[2026-04-28 09:51:33] 2026-04-28 08:50:51,866 | INFO     | job summary report
[2026-04-28 09:51:33] 2026-04-28 08:50:51,866 | INFO     | --------------------------------------------------
[2026-04-28 09:51:33] 2026-04-28 08:50:51,866 | INFO     | PanDA job id: 7116245524
[2026-04-28 09:51:33] 2026-04-28 08:50:51,866 | INFO     | task id: 49718416
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | errors: (none)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | pilot state: finished 
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | transexitcode: 0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | exeerrorcode: 0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | exeerrordiag: 
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | exitcode: 0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | exitmsg: OK
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | cpuconsumptiontime: 67549 s
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | nevents: 400
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | neventsw: 0
[2026-04-28 09:51:33] 2026-04-28 08:50:51,867 | INFO     | pid: 12007
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | pgrp: 12007
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | corecount: 4
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | event service: False
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | sizes: {0: 2280903, 1: 2282505, 11: 2282505, 20743: 2316177, 20746: 2325173, 20748: 2325551}
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | --------------------------------------------------
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | 
[2026-04-28 09:51:33] 2026-04-28 08:50:51,868 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-04-28 09:51:33] 2026-04-28 08:50:51,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | job 7116245524 has completed (purged errors)
[2026-04-28 09:51:33] 2026-04-28 08:50:51,881 | INFO     | overall cleanup function is called
[2026-04-28 09:51:33] 2026-04-28 08:50:52,888 | INFO     | --- collectZombieJob: --- 10, [12007]
[2026-04-28 09:51:33] 2026-04-28 08:50:52,888 | INFO     | zombie collector waiting for pid 12007
[2026-04-28 09:51:33] 2026-04-28 08:50:52,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 09:51:33] 2026-04-28 08:50:52,888 | INFO     | collected zombie processes
[2026-04-28 09:51:33] 2026-04-28 08:50:52,888 | INFO     | will attempt to kill all subprocesses of pid=12007
[2026-04-28 09:51:33] 2026-04-28 08:50:52,943 | INFO     | process IDs to be killed: [12007] (in reverse order)
[2026-04-28 09:51:33] 2026-04-28 08:50:52,966 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 09:51:33] 2026-04-28 08:50:52,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 09:51:33] 2026-04-28 08:50:52,968 | INFO     | did not find any defunct processes belonging to 12007
[2026-04-28 09:51:33] 2026-04-28 08:50:52,970 | INFO     | did not find any defunct processes belonging to 12007
[2026-04-28 09:51:33] 2026-04-28 08:50:52,970 | INFO     | Ready for new job
[2026-04-28 09:51:33] 2026-04-28 08:50:52,971 | INFO     | ***************************************
[2026-04-28 09:51:33] 2026-04-28 08:50:52,971 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 09:51:33] 2026-04-28 08:50:52,971 | INFO     | ***************************************
[2026-04-28 09:51:33] 2026-04-28 08:50:52,971 | INFO     | 
[2026-04-28 09:51:33] 2026-04-28 08:50:52,990 | INFO     | architecture information:
[2026-04-28 09:51:33] 2026-04-28 08:50:52,990 | INFO     | executing command: cat /etc/os-release
[2026-04-28 09:51:33] 2026-04-28 08:50:53,000 | INFO     | cat /etc/os-release:
[2026-04-28 09:51:33] NAME="CentOS Linux"
[2026-04-28 09:51:33] VERSION="7 (Core)"
[2026-04-28 09:51:33] ID="centos"
[2026-04-28 09:51:33] ID_LIKE="rhel fedora"
[2026-04-28 09:51:33] VERSION_ID="7"
[2026-04-28 09:51:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 09:51:33] ANSI_COLOR="0;31"
[2026-04-28 09:51:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 09:51:33] HOME_URL="https://www.centos.org/"
[2026-04-28 09:51:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 09:51:33] 
[2026-04-28 09:51:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 09:51:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 09:51:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 09:51:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 09:51:33] 
[2026-04-28 09:51:33] 2026-04-28 08:50:53,001 | INFO     | ***************************************
[2026-04-28 09:51:33] 2026-04-28 08:50:53,504 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-04-28 09:51:33] 2026-04-28 08:50:53,512 | INFO     | sufficient remaining disk space (390559956992 B)
[2026-04-28 09:51:33] 2026-04-28 08:50:53,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 09:51:33] 2026-04-28 08:50:53,512 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 09:51:33] 2026-04-28 08:50:53,512 | INFO     | update_server=False
[2026-04-28 09:51:33] 2026-04-28 08:50:53,512 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 09:51:33] 2026-04-28 08:50:53,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 09:51:33] 2026-04-28 08:50:53,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:51:33] 2026-04-28 08:50:53,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 09:51:33] 2026-04-28 08:50:53,728 | INFO     | all job control threads have been joined
[2026-04-28 09:51:33] 2026-04-28 08:50:53,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 09:51:33] 2026-04-28 08:50:53,943 | INFO     | aborting loop
[2026-04-28 09:51:33] 2026-04-28 08:50:54,278 | INFO     | all data control threads have been joined
[2026-04-28 09:51:33] 2026-04-28 08:50:54,518 | INFO     | [job] retrieve thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:54,518 | INFO     | [job] queue monitor thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:54,552 | INFO     | all payload control threads have been joined
[2026-04-28 09:51:33] 2026-04-28 08:50:54,733 | INFO     | [job] control thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:54,871 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:54,948 | INFO     | [job] job monitor thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,015 | INFO     | [job] validate thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,170 | INFO     | [data] copytool_in thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,281 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,284 | INFO     | [data] control thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,468 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,518 | INFO     | [data] copytool_out thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,557 | INFO     | [payload] control thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,577 | INFO     | [payload] failed_post thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:55,830 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:56,040 | INFO     | [payload] validate_post thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:50:57,518 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 09:51:33] 2026-04-28 08:51:23,870 | INFO     | PID=7621 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-28 09:51:33] 2026-04-28 08:51:23,871 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 09:51:33] 2026-04-28 08:51:23,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 09:51:33] 2026-04-28 08:51:23,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 09:51:33] 2026-04-28 08:51:26,963 | INFO     | [monitor] cgroup control has ended
[2026-04-28 09:51:33] 2026-04-28 08:51:27,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428773545792)>', '<ExcThread(monitor, started 140428485572352)>']
[2026-04-28 09:51:33] 2026-04-28 08:51:27,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 09:51:33] 2026-04-28 08:51:27,891 | INFO     | [monitor] control thread has ended
[2026-04-28 09:51:33] 2026-04-28 08:51:32,911 | INFO     | all workflow threads have been joined
[2026-04-28 09:51:33] 2026-04-28 08:51:32,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 09:51:33] 2026-04-28 08:51:32,911 | INFO     | traces error code: 0
[2026-04-28 09:51:33] 2026-04-28 08:51:32,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 09:51:33] 2026-04-28 08:51:33,006 [wrapper] ==== pilot stdout END ====
[2026-04-28 09:51:33] 2026-04-28 08:51:33,008 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 09:51:33] 2026-04-28 08:51:33,009 [wrapper] pilotpid: 7621
[2026-04-28 09:51:33] 2026-04-28 08:51:33,011 [wrapper] Pilot exit status: 0
[2026-04-28 09:51:33] 2026-04-28 08:51:33,036 [wrapper] pandaids: 7116245524
[2026-04-28 09:51:33] 2026-04-28 08:51:33,048 [wrapper] cleanup supervisor_pilot 19828 7622
[2026-04-28 09:51:33] 2026-04-28 08:51:33,051 [wrapper] Test setup, not cleaning
[2026-04-28 09:51:33] 2026-04-28 08:51:33,053 [wrapper] apfmon messages muted
[2026-04-28 09:51:33] 2026-04-28 08:51:33,055 [wrapper] ==== wrapper stdout END ====
[2026-04-28 09:51:33] 2026-04-28 08:51:33,056 [wrapper] ==== wrapper stderr END ====
[2026-04-28 09:51:33]  *** Error codes and diagnostics ***
[2026-04-28 09:51:33]     "exeErrorCode": 0,
[2026-04-28 09:51:33]     "pilotErrorCode": 0,
[2026-04-28 09:51:33]  *** Listing of results directory ***
[2026-04-28 09:51:33] total 641160
[2026-04-28 09:51:33] -rw-r--r-- 1 m m    683926 Apr 28 00:07 pilot3.tar.gz
[2026-04-28 09:51:33] -rwx------ 1 m m     36322 Apr 28 00:10 runpilot2-wrapper.sh
[2026-04-28 09:51:33] -rw-r--r-- 1 m m      5631 Apr 28 00:13 queuedata.json
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m       100 Apr 28 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 09:51:33] -rwxr-xr-x 1 m m      7986 Apr 28 04:03 run_atlas
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m       105 Apr 28 04:03 job.xml
[2026-04-28 09:51:33] -rw-r--r-- 2 m m     15667 Apr 28 04:03 start_atlas.sh
[2026-04-28 09:51:33] drwxrwx--x 2 m m      4096 Apr 28 04:03 shared
[2026-04-28 09:51:33] -rw-r--r-- 2 m m    697427 Apr 28 04:03 input.tar.gz
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m      5647 Apr 28 04:03 init_data.xml
[2026-04-28 09:51:33] -rw-r--r-- 2 m m 450943090 Apr 28 04:03 EVNT.46373187._000026.pool.root.1
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m         0 Apr 28 04:03 boinc_lockfile
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m      2594 Apr 28 04:04 pandaJob.out
[2026-04-28 09:51:33] -rw------- 1 m m    997414 Apr 28 04:04 agis_schedconf.cvmfs.json
[2026-04-28 09:51:33] -rw------- 1 m m       415 Apr 28 04:04 workernode_map.json
[2026-04-28 09:51:33] drwx------ 5 m m      4096 Apr 28 04:04 pilot3
[2026-04-28 09:51:33] -rw------- 1 m m 196994284 Apr 28 09:50 HITS.49718416._012303.pool.root.1
[2026-04-28 09:51:33] -rw------- 1 m m        95 Apr 28 09:50 pilot_heartbeat.json
[2026-04-28 09:51:33] -rw------- 1 m m      1026 Apr 28 09:50 memory_monitor_summary.json
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m       489 Apr 28 09:50 boinc_task_state.xml
[2026-04-28 09:51:33] -rw------- 1 m m   1512704 Apr 28 09:50 agis_ddmendpoints.agis.ALL.json
[2026-04-28 09:51:33] -rw------- 1 m m    379075 Apr 28 09:50 log.49718416._012303.job.log.tgz.1
[2026-04-28 09:51:33] -rw------- 1 m m      6336 Apr 28 09:50 heartbeat_new.json
[2026-04-28 09:51:33] -rw------- 1 m m      6227 Apr 28 09:50 heartbeat.json
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m      8192 Apr 28 09:51 boinc_mmap_file
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m        28 Apr 28 09:51 wrapper_checkpoint.txt
[2026-04-28 09:51:33] -rw------- 1 m m      4744 Apr 28 09:51 pilotlog.txt
[2026-04-28 09:51:33] -rw------- 1 m m   1856408 Apr 28 09:51 log.49718416._012303.job.log.1
[2026-04-28 09:51:33] -rw------- 1 m m       357 Apr 28 09:51 output.list
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m       410 Apr 28 09:51 runtime_log
[2026-04-28 09:51:33] -rw------- 1 m m   2252800 Apr 28 09:51 result.tar.gz
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m      8352 Apr 28 09:51 runtime_log.err
[2026-04-28 09:51:33] -rw------- 1 m m       645 Apr 28 09:51 ecf9cac020b3.diag
[2026-04-28 09:51:33] -rw-rw-r-- 1 m m     20912 Apr 28 09:51 stderr.txt
[2026-04-28 09:51:33] HITS file was successfully produced:
[2026-04-28 09:51:33] -rw------- 1 m m 196994284 Apr 28 09:50 shared/HITS.pool.root.1
[2026-04-28 09:51:33]  *** Contents of shared directory: ***
[2026-04-28 09:51:33] total 635664
[2026-04-28 09:51:33] -rw-r--r-- 2 m m     15667 Apr 28 04:03 start_atlas.sh
[2026-04-28 09:51:33] -rw-r--r-- 2 m m    697427 Apr 28 04:03 input.tar.gz
[2026-04-28 09:51:33] -rw-r--r-- 2 m m 450943090 Apr 28 04:03 ATLAS.root_0
[2026-04-28 09:51:33] -rw------- 1 m m 196994284 Apr 28 09:50 HITS.pool.root.1
[2026-04-28 09:51:33] -rw------- 1 m m   2252800 Apr 28 09:51 result.tar.gz
09:51:34 (3314): run_atlas exited; CPU time 67839.253312
09:51:34 (3314): called boinc_finish(0)

</stderr_txt>
]]>

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