Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:01 (282349): wrapper (7.7.26015): starting
11:19:01 (282349): wrapper: running run_atlas (--nthreads 4)
[2026-04-28 11:19:01] Arguments: --nthreads 4
[2026-04-28 11:19:01] Threads: 4
[2026-04-28 11:19:01] Checking for CVMFS
[2026-04-28 11:19:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 11:19:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 11:19:01] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 11:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 11:19:01] 2.9.2.0 4129081 2526 90024 158961 2 49 20918558 36864000 0 130560 0 1273533 99.984 97954 10866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-28 11:19:01] CVMFS is ok
[2026-04-28 11:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 11:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 11:19:01] Further information can be found at the LHC@home message board.
[2026-04-28 11:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 11:19:01] Checking for apptainer binary...
[2026-04-28 11:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 11:19:01] Running /usr/bin/apptainer --version
[2026-04-28 11:19:01] apptainer version 1.4.1-1.1
[2026-04-28 11:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 11:19:01] magicA250
[2026-04-28 11:19:01] apptainer works
[2026-04-28 11:19:01] Set ATHENA_PROC_NUMBER=4
[2026-04-28 11:19:01] Set ATHENA_CORE_NUMBER=4
[2026-04-28 11:19:01] Starting ATLAS job with PandaID=7116245459
[2026-04-28 11:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 12:36:26]  *** The last 200 lines of the pilot log: ***
[2026-04-28 12:36:26] 2026-04-28 10:35:20,802 | INFO     | ***************************************
[2026-04-28 12:36:26] 2026-04-28 10:35:20,803 | INFO     | 
[2026-04-28 12:36:26] 2026-04-28 10:35:20,803 | INFO     | architecture information:
[2026-04-28 12:36:26] 2026-04-28 10:35:20,803 | INFO     | executing command: cat /etc/os-release
[2026-04-28 12:36:26] 2026-04-28 10:35:20,819 | INFO     | cat /etc/os-release:
[2026-04-28 12:36:26] NAME="CentOS Linux"
[2026-04-28 12:36:26] VERSION="7 (Core)"
[2026-04-28 12:36:26] ID="centos"
[2026-04-28 12:36:26] ID_LIKE="rhel fedora"
[2026-04-28 12:36:26] VERSION_ID="7"
[2026-04-28 12:36:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 12:36:26] ANSI_COLOR="0;31"
[2026-04-28 12:36:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 12:36:26] HOME_URL="https://www.centos.org/"
[2026-04-28 12:36:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 12:36:26] 
[2026-04-28 12:36:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 12:36:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 12:36:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 12:36:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 12:36:26] 
[2026-04-28 12:36:26] 2026-04-28 10:35:20,819 | INFO     | ***************************************
[2026-04-28 12:36:26] 2026-04-28 10:35:20,824 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 12:36:26] 2026-04-28 10:35:20,824 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 12:36:26] 2026-04-28 10:35:20,824 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-28 12:36:26] 2026-04-28 10:35:20,824 | WARNING  | maxPSS not found in memory monitor output
[2026-04-28 12:36:26] 2026-04-28 10:35:20,824 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7116245459/payload.stdout) since it has not been created yet
[2026-04-28 12:36:26] 2026-04-28 10:35:20,825 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-28 12:36:26] 2026-04-28 10:35:20,840 | INFO     | sufficient remaining disk space (330092773376 B)
[2026-04-28 12:36:26] 2026-04-28 10:35:20,840 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-28 12:36:26] 2026-04-28 10:35:20,840 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7116245459/HITS.49718416._012258.pool.root.1 since it does not exist
[2026-04-28 12:36:26] 2026-04-28 10:35:20,872 | INFO     | number of running child processes to parent process 290989: 1
[2026-04-28 12:36:26] 2026-04-28 10:35:20,872 | INFO     | maximum number of monitored processes: 6
[2026-04-28 12:36:26] 2026-04-28 10:35:20,872 | INFO     | aborting job monitoring since job object (job id=7116245459) has expired
[2026-04-28 12:36:26] 2026-04-28 10:35:21,323 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | INFO     | sufficient remaining disk space (330092773376 B)
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | INFO     | update_server=False
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 12:36:26] 2026-04-28 10:35:21,340 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:36:26] 2026-04-28 10:35:21,341 | INFO     | will abort loop
[2026-04-28 12:36:26] 2026-04-28 10:35:21,575 | INFO     | all data control threads have been joined
[2026-04-28 12:36:26] 2026-04-28 10:35:21,820 | INFO     | all payload control threads have been joined
[2026-04-28 12:36:26] 2026-04-28 10:35:22,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 12:36:26] 2026-04-28 10:35:22,324 | INFO     | all job control threads have been joined
[2026-04-28 12:36:26] 2026-04-28 10:35:22,346 | INFO     | [job] retrieve thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,346 | INFO     | [job] queue monitor thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,347 | INFO     | [job] job monitor thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,579 | INFO     | [data] control thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,676 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,826 | INFO     | [payload] control thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:22,967 | INFO     | [job] validate thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,064 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,115 | INFO     | [payload] validate_post thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,162 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,302 | INFO     | [payload] failed_post thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,322 | INFO     | [data] copytool_in thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:23,330 | INFO     | [job] control thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:24,201 | INFO     | [data] copytool_out thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:24,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 12:36:26] 2026-04-28 10:35:28,775 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:35:32,338 | INFO     | job.realtimelogging is not enabled
[2026-04-28 12:36:26] 2026-04-28 10:35:33,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 12:36:26] 2026-04-28 10:36:20,248 | INFO     | [monitor] cgroup control has ended
[2026-04-28 12:36:26] 2026-04-28 10:36:20,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883641726784)>', '<ExcThread(monitor, started 139882714359552)>']
[2026-04-28 12:36:26] 2026-04-28 10:36:21,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 12:36:26] 2026-04-28 10:36:21,661 | INFO     | [monitor] control thread has ended
[2026-04-28 12:36:26] 2026-04-28 10:36:25,864 | INFO     | all workflow threads have been joined
[2026-04-28 12:36:26] 2026-04-28 10:36:25,866 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 12:36:26] 2026-04-28 10:36:25,866 | INFO     | traces error code: 0
[2026-04-28 12:36:26] 2026-04-28 10:36:25,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 12:36:26] 2026-04-28 10:36:25,947 [wrapper] ==== pilot stdout END ====
[2026-04-28 12:36:26] 2026-04-28 10:36:25,952 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 12:36:26] 2026-04-28 10:36:25,957 [wrapper] pilotpid: 286462
[2026-04-28 12:36:26] 2026-04-28 10:36:25,961 [wrapper] Pilot exit status: 0
[2026-04-28 12:36:26] 2026-04-28 10:36:25,974 [wrapper] pandaids: 7116245459
[2026-04-28 12:36:26] 2026-04-28 10:36:25,996 [wrapper] cleanup supervisor_pilot  296643 286463
[2026-04-28 12:36:26] 2026-04-28 10:36:26,000 [wrapper] Test setup, not cleaning
[2026-04-28 12:36:26] 2026-04-28 10:36:26,004 [wrapper] apfmon messages muted
[2026-04-28 12:36:26] 2026-04-28 10:36:26,008 [wrapper] ==== wrapper stdout END ====
[2026-04-28 12:36:26] 2026-04-28 10:36:26,011 [wrapper] ==== wrapper stderr END ====
[2026-04-28 12:36:26]  *** Error codes and diagnostics ***
[2026-04-28 12:36:26]     "exeErrorCode": 0,
[2026-04-28 12:36:26]     "pilotErrorCode": 0,
[2026-04-28 12:36:26]  *** Listing of results directory ***
[2026-04-28 12:36:26] total 625292
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc    683926 Apr 28 01:07 pilot3.tar.gz
[2026-04-28 12:36:26] -rwx------ 1 boinc boinc     36322 Apr 28 01:10 runpilot2-wrapper.sh
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc      5631 Apr 28 01:13 queuedata.json
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc       100 Apr 28 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 12:36:26] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 11:19 run_atlas
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc       105 Apr 28 11:19 job.xml
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc 445206835 Apr 28 11:19 EVNT.46373187._000025.pool.root.1
[2026-04-28 12:36:26] drwxrwx--x 2 boinc boinc      4096 Apr 28 11:19 shared
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc    697429 Apr 28 11:19 input.tar.gz
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc     15667 Apr 28 11:19 start_atlas.sh
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc         0 Apr 28 11:19 boinc_setup_complete
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc      6294 Apr 28 11:19 init_data.xml
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc         0 Apr 28 11:19 boinc_lockfile
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc      2594 Apr 28 11:19 pandaJob.out
[2026-04-28 12:36:26] -rw------- 1 boinc boinc    992901 Apr 28 11:19 agis_schedconf.cvmfs.json
[2026-04-28 12:36:26] -rw------- 1 boinc boinc   1512704 Apr 28 11:19 agis_ddmendpoints.agis.ALL.json
[2026-04-28 12:36:26] -rw------- 1 boinc boinc       423 Apr 28 11:19 workernode_map.json
[2026-04-28 12:36:26] drwx------ 5 boinc boinc      4096 Apr 28 11:19 pilot3
[2026-04-28 12:36:26] -rw------- 1 boinc boinc        95 Apr 28 12:34 pilot_heartbeat.json
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc       488 Apr 28 12:34 boinc_task_state.xml
[2026-04-28 12:36:26] -rw------- 1 boinc boinc 189589555 Apr 28 12:34 HITS.49718416._012258.pool.root.1
[2026-04-28 12:36:26] -rw------- 1 boinc boinc      1026 Apr 28 12:35 memory_monitor_summary.json
[2026-04-28 12:36:26] -rw------- 1 boinc boinc    240525 Apr 28 12:35 log.49718416._012258.job.log.tgz.1
[2026-04-28 12:36:26] -rw------- 1 boinc boinc      6342 Apr 28 12:35 heartbeat_new.json
[2026-04-28 12:36:26] -rw------- 1 boinc boinc      6233 Apr 28 12:35 heartbeat.json
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc      8192 Apr 28 12:36 boinc_mmap_file
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc        27 Apr 28 12:36 wrapper_checkpoint.txt
[2026-04-28 12:36:26] -rw------- 1 boinc boinc      6013 Apr 28 12:36 pilotlog.txt
[2026-04-28 12:36:26] -rw------- 1 boinc boinc    450861 Apr 28 12:36 log.49718416._012258.job.log.1
[2026-04-28 12:36:26] -rw------- 1 boinc boinc       357 Apr 28 12:36 output.list
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc       410 Apr 28 12:36 runtime_log
[2026-04-28 12:36:26] -rw------- 1 boinc boinc    706560 Apr 28 12:36 result.tar.gz
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc      8534 Apr 28 12:36 runtime_log.err
[2026-04-28 12:36:26] -rw------- 1 boinc boinc       660 Apr 28 12:36 ecf9eeff5ba2.diag
[2026-04-28 12:36:26] -rw-r--r-- 1 boinc boinc     10699 Apr 28 12:36 stderr.txt
[2026-04-28 12:36:26] HITS file was successfully produced:
[2026-04-28 12:36:26] -rw------- 1 boinc boinc 189589555 Apr 28 12:34 shared/HITS.pool.root.1
[2026-04-28 12:36:26]  *** Contents of shared directory: ***
[2026-04-28 12:36:26] total 621320
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc 445206835 Apr 28 11:19 ATLAS.root_0
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc    697429 Apr 28 11:19 input.tar.gz
[2026-04-28 12:36:26] -rw-r--r-- 2 boinc boinc     15667 Apr 28 11:19 start_atlas.sh
[2026-04-28 12:36:26] -rw------- 1 boinc boinc 189589555 Apr 28 12:34 HITS.pool.root.1
[2026-04-28 12:36:26] -rw------- 1 boinc boinc    706560 Apr 28 12:36 result.tar.gz
12:36:27 (282349): run_atlas exited; CPU time 16391.788203
12:36:27 (282349): called boinc_finish(0)

</stderr_txt>
]]>

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