Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:46:14 (1723553): wrapper (7.7.26015): starting
19:46:14 (1723553): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 19:46:14] Arguments: --nthreads 8
[2026-04-27 19:46:14] Threads: 8
[2026-04-27 19:46:14] Checking for CVMFS
[2026-04-27 19:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 19:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 19:46:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 19:46:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 19:46:22] 2.13.3.0 9597 178856 144224 158946 2 868 39965436 40960001 38870 16776704 0 1480770694 99.728 1072905311 45624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-27 19:46:22] CVMFS is ok
[2026-04-27 19:46:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 19:46:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 19:46:22] Further information can be found at the LHC@home message board.
[2026-04-27 19:46:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 19:46:22] Checking for apptainer binary...
[2026-04-27 19:46:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 19:46:22] Running /usr/bin/apptainer --version
[2026-04-27 19:46:23] apptainer version 1.4.5-3.el9
[2026-04-27 19:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 19:46:23] c-208-38.aglt2.org
[2026-04-27 19:46:23] apptainer works
[2026-04-27 19:46:23] Set ATHENA_PROC_NUMBER=8
[2026-04-27 19:46:23] Set ATHENA_CORE_NUMBER=8
[2026-04-27 19:46:23] Starting ATLAS job with PandaID=7116285916
[2026-04-27 19:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 22:52:35]  *** The last 200 lines of the pilot log: ***
[2026-04-27 22:52:35] 2026-04-28 02:51:32,773 | INFO     | job 7116285916 has finished - writing final server update
[2026-04-27 22:52:35] 2026-04-28 02:51:32,773 | INFO     | total number of processed events: 400 (read)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,820 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7116285916/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,820 | INFO     | extracted standard info from prmon json
[2026-04-27 22:52:35] 2026-04-28 02:51:32,820 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 22:52:35] 2026-04-28 02:51:32,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 22:52:35] 2026-04-28 02:51:32,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 22:52:35] 2026-04-28 02:51:32,830 | INFO     | fitting pss+swap vs Time
[2026-04-27 22:52:35] 2026-04-28 02:51:32,831 | INFO     | sum of square deviations: 1748719120.4101098
[2026-04-27 22:52:35] 2026-04-28 02:51:32,831 | INFO     | sum of deviations: 33095970374.764004
[2026-04-27 22:52:35] 2026-04-28 02:51:32,831 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,831 | INFO     | mean y: 2469363.808988764
[2026-04-27 22:52:35] 2026-04-28 02:51:32,831 | INFO     | intersect: 2469363.808988764
[2026-04-27 22:52:35] 2026-04-28 02:51:32,832 | INFO     | chi2: 5.092364209787055
[2026-04-27 22:52:35] 2026-04-28 02:51:32,832 | INFO     | sum of square deviations: 1605452537.9075196
[2026-04-27 22:52:35] 2026-04-28 02:51:32,832 | INFO     | sum of deviations: 56237551107.884346
[2026-04-27 22:52:35] 2026-04-28 02:51:32,832 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,839 | INFO     | mean y: 2493551.028901734
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | intersect: 2493551.028901734
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | chi2: 3.497739393244973
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | current chi2=3.497739393244973 (change=31.314037072944622 %)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | sum of square deviations: 1470232617.9047577
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | sum of deviations: 54469969707.80951
[2026-04-27 22:52:35] 2026-04-28 02:51:32,840 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | mean y: 2491557.2976190476
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | intersect: 2491557.2976190476
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | chi2: 3.50328930530493
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | current chi2=3.50328930530493 (change=-0.15867139989545798 %)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | right removable region: 167
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | sum of square deviations: 1605450097.9075196
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | sum of deviations: -17529604317.17919
[2026-04-27 22:52:35] 2026-04-28 02:51:32,841 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | mean y: 2522982.294797688
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | intersect: 2522982.294797688
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | chi2: 1.7756932307226276
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | current chi2=1.7756932307226276 (change=65.13027824463323 %)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | sum of square deviations: 1470227737.9047577
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | sum of deviations: -23537878218.85714
[2026-04-27 22:52:35] 2026-04-28 02:51:32,842 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | mean y: 2529684.214285714
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | intersect: 2529684.214285714
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | chi2: 1.7112674918206512
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | current chi2=1.7112674918206512 (change=3.628202089600694 %)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | left removable region: 10
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | sum of square deviations: 1199922097.8980875
[2026-04-27 22:52:35] 2026-04-28 02:51:32,843 | INFO     | sum of deviations: -230067605.77070102
[2026-04-27 22:52:35] 2026-04-28 02:51:32,861 | INFO     | mean x (centered): 0.0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | mean y: 2557073.9426751593
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | intersect: 2557073.9426751593
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | chi2: 0.0062250615604054396
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | current memory leak: -0.19 B/s (using 157 data points, chi2=0.01)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | could have reported an average CPU frequency of 3799 MHz (10 samples)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | ..............................
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | . Timing measurements:
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | . get job = 0 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,862 | INFO     | . initial setup = 31 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | . payload setup = 120 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | . stage-in = 0 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | . payload execution = 10857 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | . stage-out = 4 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | . log creation = 0 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,863 | INFO     | ..............................
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | 
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | job summary report
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | --------------------------------------------------
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | PanDA job id: 7116285916
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | task id: 49820244
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | errors: (none)
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | pilot state: finished 
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | transexitcode: 0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | exeerrorcode: 0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | exeerrordiag: 
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | exitcode: 0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | exitmsg: OK
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | cpuconsumptiontime: 40109 s
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | nevents: 400
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | neventsw: 0
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | pid: 1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | pgrp: 1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | corecount: 8
[2026-04-27 22:52:35] 2026-04-28 02:51:32,927 | INFO     | event service: False
[2026-04-27 22:52:35] 2026-04-28 02:51:32,928 | INFO     | sizes: {0: 2282481, 11: 2282481, 10983: 2311872, 10987: 2320898, 10991: 2321148}
[2026-04-27 22:52:35] 2026-04-28 02:51:32,928 | INFO     | --------------------------------------------------
[2026-04-27 22:52:35] 2026-04-28 02:51:32,928 | INFO     | 
[2026-04-27 22:52:35] 2026-04-28 02:51:32,928 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | job 7116285916 has completed (purged errors)
[2026-04-27 22:52:35] 2026-04-28 02:51:33,040 | INFO     | overall cleanup function is called
[2026-04-27 22:52:35] 2026-04-28 02:51:34,066 | INFO     | --- collectZombieJob: --- 10, [1772231]
[2026-04-27 22:52:35] 2026-04-28 02:51:34,067 | INFO     | zombie collector waiting for pid 1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:34,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 22:52:35] 2026-04-28 02:51:34,067 | INFO     | collected zombie processes
[2026-04-27 22:52:35] 2026-04-28 02:51:34,067 | INFO     | will attempt to kill all subprocesses of pid=1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:36,087 | INFO     | process IDs to be killed: [1772231] (in reverse order)
[2026-04-27 22:52:35] 2026-04-28 02:51:36,128 | INFO     | PID=1735844 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-27 22:52:35] 2026-04-28 02:51:36,129 | INFO     | .. there are 43 such processes running
[2026-04-27 22:52:35] 2026-04-28 02:51:37,514 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 22:52:35] 2026-04-28 02:51:37,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 22:52:35] 2026-04-28 02:51:37,747 | INFO     | did not find any defunct processes belonging to 1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:37,831 | INFO     | did not find any defunct processes belonging to 1772231
[2026-04-27 22:52:35] 2026-04-28 02:51:37,831 | INFO     | Ready for new job
[2026-04-27 22:52:35] 2026-04-28 02:51:37,832 | INFO     | ***************************************
[2026-04-27 22:52:35] 2026-04-28 02:51:37,832 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 22:52:35] 2026-04-28 02:51:37,832 | INFO     | ***************************************
[2026-04-27 22:52:35] 2026-04-28 02:51:37,832 | INFO     | 
[2026-04-27 22:52:35] 2026-04-28 02:51:37,853 | INFO     | architecture information:
[2026-04-27 22:52:35] 2026-04-28 02:51:37,853 | INFO     | executing command: cat /etc/os-release
[2026-04-27 22:52:35] 2026-04-28 02:51:37,882 | INFO     | cat /etc/os-release:
[2026-04-27 22:52:35] NAME="CentOS Linux"
[2026-04-27 22:52:35] VERSION="7 (Core)"
[2026-04-27 22:52:35] ID="centos"
[2026-04-27 22:52:35] ID_LIKE="rhel fedora"
[2026-04-27 22:52:35] VERSION_ID="7"
[2026-04-27 22:52:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 22:52:35] ANSI_COLOR="0;31"
[2026-04-27 22:52:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 22:52:35] HOME_URL="https://www.centos.org/"
[2026-04-27 22:52:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 22:52:35] 
[2026-04-27 22:52:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 22:52:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 22:52:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 22:52:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 22:52:35] 
[2026-04-27 22:52:35] 2026-04-28 02:51:37,882 | INFO     | ***************************************
[2026-04-27 22:52:35] 2026-04-28 02:51:38,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | INFO     | sufficient remaining disk space (153677201408 B)
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | INFO     | update_server=False
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 22:52:35] 2026-04-28 02:51:38,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 22:52:35] 2026-04-28 02:51:38,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:52:35] 2026-04-28 02:51:38,764 | INFO     | all data control threads have been joined
[2026-04-27 22:52:35] 2026-04-28 02:51:38,815 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 22:52:35] 2026-04-28 02:51:38,816 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 22:52:35] 2026-04-28 02:51:38,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:52:35] 2026-04-28 02:51:38,816 | INFO     | will abort loop
[2026-04-27 22:52:35] 2026-04-28 02:51:39,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 22:52:35] 2026-04-28 02:51:39,457 | INFO     | [job] queue monitor thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,457 | INFO     | [job] retrieve thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,487 | INFO     | all job control threads have been joined
[2026-04-27 22:52:35] 2026-04-28 02:51:39,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,531 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,643 | INFO     | [data] copytool_in thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,710 | INFO     | all payload control threads have been joined
[2026-04-27 22:52:35] 2026-04-28 02:51:39,723 | INFO     | [payload] failed_post thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,770 | INFO     | [data] control thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:39,822 | INFO     | [job] job monitor thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,225 | INFO     | [payload] validate_post thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,288 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,297 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,494 | INFO     | [job] control thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,717 | INFO     | [payload] control thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:40,857 | INFO     | [job] validate thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:41,284 | INFO     | [data] copytool_out thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:51:42,462 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 22:52:35] 2026-04-28 02:52:10,231 | INFO     | PID=1735844 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 22:52:35] 2026-04-28 02:52:10,231 | INFO     | .. there are 43 such processes running
[2026-04-27 22:52:35] 2026-04-28 02:52:10,231 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 22:52:35] 2026-04-28 02:52:10,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 22:52:35] 2026-04-28 02:52:10,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 22:52:35] 2026-04-28 02:52:28,642 | INFO     | [monitor] cgroup control has ended
[2026-04-27 22:52:35] 2026-04-28 02:52:29,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157788870464)>', '<ExcThread(monitor, started 140157432870656)>']
[2026-04-27 22:52:35] 2026-04-28 02:52:29,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 22:52:35] 2026-04-28 02:52:29,371 | INFO     | [monitor] control thread has ended
[2026-04-27 22:52:35] 2026-04-28 02:52:34,145 | INFO     | all workflow threads have been joined
[2026-04-27 22:52:35] 2026-04-28 02:52:34,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 22:52:35] 2026-04-28 02:52:34,147 | INFO     | traces error code: 0
[2026-04-27 22:52:35] 2026-04-28 02:52:34,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 22:52:35] 2026-04-28 02:52:34,875 [wrapper] ==== pilot stdout END ====
[2026-04-27 22:52:35] 2026-04-28 02:52:34,887 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 22:52:35] 2026-04-28 02:52:34,910 [wrapper] pilotpid: 1735844
[2026-04-27 22:52:35] 2026-04-28 02:52:34,949 [wrapper] Pilot exit status: 0
[2026-04-27 22:52:35] 2026-04-28 02:52:35,026 [wrapper] pandaids: 7116285916
[2026-04-27 22:52:35] 2026-04-28 02:52:35,303 [wrapper] cleanup supervisor_pilot 2956370 1735845
[2026-04-27 22:52:35] 2026-04-28 02:52:35,316 [wrapper] Test setup, not cleaning
[2026-04-27 22:52:35] 2026-04-28 02:52:35,331 [wrapper] apfmon messages muted
[2026-04-27 22:52:35] 2026-04-28 02:52:35,334 [wrapper] ==== wrapper stdout END ====
[2026-04-27 22:52:35] 2026-04-28 02:52:35,336 [wrapper] ==== wrapper stderr END ====
[2026-04-27 22:52:35]  *** Error codes and diagnostics ***
[2026-04-27 22:52:35]     "exeErrorCode": 0,
[2026-04-27 22:52:35]     "pilotErrorCode": 0,
[2026-04-27 22:52:35]  *** Listing of results directory ***
[2026-04-27 22:52:35] total 2452368
[2026-04-27 22:52:35] -rwx------. 1 boincer umatlas      36322 Apr 27 14:41 runpilot2-wrapper.sh
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas     683926 Apr 27 14:44 pilot3.tar.gz
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas       5631 Apr 27 14:44 queuedata.json
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas        100 Apr 27 19:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 22:52:35] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 27 19:46 run_atlas
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas        105 Apr 27 19:46 job.xml
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas 2230511963 Apr 27 19:46 EVNT.49820242._000061.pool.root.1
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 19:46 start_atlas.sh
[2026-04-27 22:52:35] drwxrwx--x. 2 boincer umatlas       4096 Apr 27 19:46 shared
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas     697405 Apr 27 19:46 input.tar.gz
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas          0 Apr 27 19:46 boinc_lockfile
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas       2551 Apr 27 19:46 pandaJob.out
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas         57 Apr 27 19:46 setup.sh.local
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas     997422 Apr 27 19:47 agis_schedconf.cvmfs.json
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas        431 Apr 27 19:48 workernode_map.json
[2026-04-27 22:52:35] drwx------. 5 boincer umatlas       4096 Apr 27 19:48 pilot3
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas       7099 Apr 27 22:48 init_data.xml
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas  273818663 Apr 27 22:49 HITS.49820244._023053.pool.root.1
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas        488 Apr 27 22:49 boinc_task_state.xml
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas         95 Apr 27 22:51 pilot_heartbeat.json
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas       1038 Apr 27 22:51 memory_monitor_summary.json
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas    1512704 Apr 27 22:51 agis_ddmendpoints.agis.ALL.json
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas     394203 Apr 27 22:51 log.49820244._023053.job.log.tgz.1
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas       6364 Apr 27 22:51 heartbeat_new.json
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas       6255 Apr 27 22:51 heartbeat.json
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas         27 Apr 27 22:52 wrapper_checkpoint.txt
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas       8192 Apr 27 22:52 boinc_mmap_file
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas       5010 Apr 27 22:52 pilotlog.txt
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas     980908 Apr 27 22:52 log.49820244._023053.job.log.1
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas        357 Apr 27 22:52 output.list
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas        410 Apr 27 22:52 runtime_log
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas    1392640 Apr 27 22:52 result.tar.gz
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas       8965 Apr 27 22:52 runtime_log.err
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas        655 Apr 27 22:52 adec570e2669.diag
[2026-04-27 22:52:35] -rw-r--r--. 1 boincer umatlas      21110 Apr 27 22:52 stderr.txt
[2026-04-27 22:52:35] HITS file was successfully produced:
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas 273818663 Apr 27 22:49 shared/HITS.pool.root.1
[2026-04-27 22:52:35]  *** Contents of shared directory: ***
[2026-04-27 22:52:35] total 2447708
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas 2230511963 Apr 27 19:46 ATLAS.root_0
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 19:46 start_atlas.sh
[2026-04-27 22:52:35] -rw-r--r--. 2 boincer umatlas     697405 Apr 27 19:46 input.tar.gz
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas  273818663 Apr 27 22:49 HITS.pool.root.1
[2026-04-27 22:52:35] -rw-------. 1 boincer umatlas    1392640 Apr 27 22:52 result.tar.gz
22:52:58 (1723553): run_atlas exited; CPU time 40297.277171
22:52:58 (1723553): called boinc_finish(0)

</stderr_txt>
]]>

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