Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:23:31 (29248): wrapper (7.7.26015): starting
10:23:31 (29248): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 10:23:31] Arguments: --nthreads 8
[2026-04-28 10:23:31] Threads: 8
[2026-04-28 10:23:31] Checking for CVMFS
[2026-04-28 10:23:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 10:23:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 10:23:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 10:23:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 10:23:36] 2.11.2.0 19079 18214 101464 158959 2 53 19033420 25165825 96 130560 0 8524152 99.897 3733992 6903 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 10:23:36] CVMFS is ok
[2026-04-28 10:23:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 10:23:36] Checking for apptainer binary...
[2026-04-28 10:23:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 10:23:36] Running /usr/bin/apptainer --version
[2026-04-28 10:23:36] apptainer version 1.3.2-1.el7
[2026-04-28 10:23:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 10:23:56] cg-vwn478.simple-grid.lan
[2026-04-28 10:23:56] apptainer works
[2026-04-28 10:23:56] Set ATHENA_PROC_NUMBER=8
[2026-04-28 10:23:56] Set ATHENA_CORE_NUMBER=8
[2026-04-28 10:23:56] Starting ATLAS job with PandaID=7116258904
[2026-04-28 10:23:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 14:43:26]  *** The last 200 lines of the pilot log: ***
[2026-04-28 14:43:26] 2026-04-28 12:42:26,686 | INFO     | job 7116258904 has finished - writing final server update
[2026-04-28 14:43:26] 2026-04-28 12:42:26,686 | INFO     | total number of processed events: 400 (read)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,688 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7116258904/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,689 | INFO     | extracted standard info from prmon json
[2026-04-28 14:43:26] 2026-04-28 12:42:26,689 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 14:43:26] 2026-04-28 12:42:26,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 14:43:26] 2026-04-28 12:42:26,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 14:43:26] 2026-04-28 12:42:26,694 | INFO     | fitting pss+swap vs Time
[2026-04-28 14:43:26] 2026-04-28 12:42:26,695 | INFO     | sum of square deviations: 4449281562.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,697 | INFO     | sum of deviations: 117795133786.99998
[2026-04-28 14:43:26] 2026-04-28 12:42:26,697 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,697 | INFO     | mean y: 2439775.991769547
[2026-04-28 14:43:26] 2026-04-28 12:42:26,697 | INFO     | intersect: 2439775.991769547
[2026-04-28 14:43:26] 2026-04-28 12:42:26,697 | INFO     | chi2: 11.341953489852624
[2026-04-28 14:43:26] 2026-04-28 12:42:26,698 | INFO     | sum of square deviations: 4180243959.5
[2026-04-28 14:43:26] 2026-04-28 12:42:26,700 | INFO     | sum of deviations: 148439659653.5
[2026-04-28 14:43:26] 2026-04-28 12:42:26,700 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,700 | INFO     | mean y: 2456911.844537815
[2026-04-28 14:43:26] 2026-04-28 12:42:26,700 | INFO     | intersect: 2456911.844537815
[2026-04-28 14:43:26] 2026-04-28 12:42:26,700 | INFO     | chi2: 9.898119912182336
[2026-04-28 14:43:26] 2026-04-28 12:42:26,701 | INFO     | current chi2=9.898119912182336 (change=12.73002555478694 %)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,701 | INFO     | right removable region: 237
[2026-04-28 14:43:26] 2026-04-28 12:42:26,701 | INFO     | sum of square deviations: 4180243959.5
[2026-04-28 14:43:26] 2026-04-28 12:42:26,703 | INFO     | sum of deviations: 27966798771.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,703 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,703 | INFO     | mean y: 2490698.3781512603
[2026-04-28 14:43:26] 2026-04-28 12:42:26,703 | INFO     | intersect: 2490698.3781512603
[2026-04-28 14:43:26] 2026-04-28 12:42:26,704 | INFO     | chi2: 5.54955660965034
[2026-04-28 14:43:26] 2026-04-28 12:42:26,704 | INFO     | current chi2=5.54955660965034 (change=51.07053987996516 %)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,704 | INFO     | sum of square deviations: 3922276332.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,706 | INFO     | sum of deviations: -42238082746.00001
[2026-04-28 14:43:26] 2026-04-28 12:42:26,706 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,706 | INFO     | mean y: 2532153.7424892704
[2026-04-28 14:43:26] 2026-04-28 12:42:26,706 | INFO     | intersect: 2532153.7424892704
[2026-04-28 14:43:26] 2026-04-28 12:42:26,707 | INFO     | chi2: 2.304178271421846
[2026-04-28 14:43:26] 2026-04-28 12:42:26,707 | INFO     | current chi2=2.304178271421846 (change=58.47995734623157 %)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,707 | INFO     | sum of square deviations: 3675146117.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,709 | INFO     | sum of deviations: -62258916993.5
[2026-04-28 14:43:26] 2026-04-28 12:42:26,709 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,709 | INFO     | mean y: 2544389.9078947366
[2026-04-28 14:43:26] 2026-04-28 12:42:26,710 | INFO     | intersect: 2544389.9078947366
[2026-04-28 14:43:26] 2026-04-28 12:42:26,710 | INFO     | chi2: 1.8240746895933535
[2026-04-28 14:43:26] 2026-04-28 12:42:26,710 | INFO     | current chi2=1.8240746895933535 (change=20.836216875365018 %)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,710 | INFO     | left removable region: 15
[2026-04-28 14:43:26] 2026-04-28 12:42:26,711 | INFO     | sum of square deviations: 3392567795.5
[2026-04-28 14:43:26] 2026-04-28 12:42:26,712 | INFO     | sum of deviations: -29710275364.500008
[2026-04-28 14:43:26] 2026-04-28 12:42:26,712 | INFO     | mean x (centered): 0.0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,712 | INFO     | mean y: 2565111.7702702703
[2026-04-28 14:43:26] 2026-04-28 12:42:26,713 | INFO     | intersect: 2565111.7702702703
[2026-04-28 14:43:26] 2026-04-28 12:42:26,713 | INFO     | chi2: 0.14311957325443392
[2026-04-28 14:43:26] 2026-04-28 12:42:26,713 | INFO     | current memory leak: -8.76 B/s (using 222 data points, chi2=0.14)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | ..............................
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . Timing measurements:
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . get job = 0 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . initial setup = 135 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . payload setup = 170 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . stage-in = 0 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,714 | INFO     | . payload execution = 14903 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,715 | INFO     | . stage-out = 3 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,715 | INFO     | . log creation = 1 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,715 | INFO     | ..............................
[2026-04-28 14:43:26] 2026-04-28 12:42:26,834 | INFO     | 
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | job summary report
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | --------------------------------------------------
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | PanDA job id: 7116258904
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | task id: 49912707
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | errors: (none)
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 14:43:26] 2026-04-28 12:42:26,835 | INFO     | pilot state: finished 
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | transexitcode: 0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | exeerrorcode: 0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | exeerrordiag: 
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | exitcode: 0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | exitmsg: OK
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | cpuconsumptiontime: 55749 s
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | nevents: 400
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | neventsw: 0
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | pid: 5317
[2026-04-28 14:43:26] 2026-04-28 12:42:26,836 | INFO     | pgrp: 5317
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | corecount: 8
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | event service: False
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | sizes: {0: 2280710, 1: 2281021, 2: 2282595, 12: 2282623, 15078: 2313734, 15082: 2322732, 15083: 2322916, 15085: 2323138}
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | --------------------------------------------------
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | 
[2026-04-28 14:43:26] 2026-04-28 12:42:26,837 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-04-28 14:43:26] 2026-04-28 12:42:27,435 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,435 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,435 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | job 7116258904 has completed (purged errors)
[2026-04-28 14:43:26] 2026-04-28 12:42:27,437 | INFO     | overall cleanup function is called
[2026-04-28 14:43:26] 2026-04-28 12:42:28,446 | INFO     | --- collectZombieJob: --- 10, [5317]
[2026-04-28 14:43:26] 2026-04-28 12:42:28,447 | INFO     | zombie collector waiting for pid 5317
[2026-04-28 14:43:26] 2026-04-28 12:42:28,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 14:43:26] 2026-04-28 12:42:28,447 | INFO     | collected zombie processes
[2026-04-28 14:43:26] 2026-04-28 12:42:28,447 | INFO     | will attempt to kill all subprocesses of pid=5317
[2026-04-28 14:43:26] 2026-04-28 12:42:28,505 | INFO     | process IDs to be killed: [5317] (in reverse order)
[2026-04-28 14:43:26] 2026-04-28 12:42:28,828 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 14:43:26] 2026-04-28 12:42:28,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 14:43:26] 2026-04-28 12:42:28,831 | INFO     | did not find any defunct processes belonging to 5317
[2026-04-28 14:43:26] 2026-04-28 12:42:28,833 | INFO     | did not find any defunct processes belonging to 5317
[2026-04-28 14:43:26] 2026-04-28 12:42:28,833 | INFO     | Ready for new job
[2026-04-28 14:43:26] 2026-04-28 12:42:28,835 | INFO     | ***************************************
[2026-04-28 14:43:26] 2026-04-28 12:42:28,835 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 14:43:26] 2026-04-28 12:42:28,835 | INFO     | ***************************************
[2026-04-28 14:43:26] 2026-04-28 12:42:28,835 | INFO     | 
[2026-04-28 14:43:26] 2026-04-28 12:42:28,836 | INFO     | pilot is running in a VM
[2026-04-28 14:43:26] 2026-04-28 12:42:28,836 | INFO     | architecture information:
[2026-04-28 14:43:26] 2026-04-28 12:42:28,836 | INFO     | executing command: cat /etc/os-release
[2026-04-28 14:43:26] 2026-04-28 12:42:29,173 | INFO     | cat /etc/os-release:
[2026-04-28 14:43:26] NAME="CentOS Linux"
[2026-04-28 14:43:26] VERSION="7 (Core)"
[2026-04-28 14:43:26] ID="centos"
[2026-04-28 14:43:26] ID_LIKE="rhel fedora"
[2026-04-28 14:43:26] VERSION_ID="7"
[2026-04-28 14:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 14:43:26] ANSI_COLOR="0;31"
[2026-04-28 14:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 14:43:26] HOME_URL="https://www.centos.org/"
[2026-04-28 14:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 14:43:26] 
[2026-04-28 14:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 14:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 14:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 14:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 14:43:26] 
[2026-04-28 14:43:26] 2026-04-28 12:42:29,174 | INFO     | ***************************************
[2026-04-28 14:43:26] 2026-04-28 12:42:29,677 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-04-28 14:43:26] 2026-04-28 12:42:29,940 | INFO     | sufficient remaining disk space (495696478208 B)
[2026-04-28 14:43:26] 2026-04-28 12:42:29,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 14:43:26] 2026-04-28 12:42:29,941 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 14:43:26] 2026-04-28 12:42:29,941 | INFO     | update_server=False
[2026-04-28 14:43:26] 2026-04-28 12:42:29,941 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 14:43:26] 2026-04-28 12:42:29,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 14:43:26] 2026-04-28 12:42:30,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 14:43:26] 2026-04-28 12:42:30,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 14:43:26] 2026-04-28 12:42:30,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:43:26] 2026-04-28 12:42:30,024 | INFO     | will abort loop
[2026-04-28 14:43:26] 2026-04-28 12:42:30,176 | INFO     | all payload control threads have been joined
[2026-04-28 14:43:26] 2026-04-28 12:42:30,676 | INFO     | all job control threads have been joined
[2026-04-28 14:43:26] 2026-04-28 12:42:30,680 | INFO     | all data control threads have been joined
[2026-04-28 14:43:26] 2026-04-28 12:42:30,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 14:43:26] 2026-04-28 12:42:30,947 | INFO     | [job] retrieve thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,030 | INFO     | [job] job monitor thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,098 | INFO     | [data] copytool_in thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,183 | INFO     | [payload] control thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,328 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,408 | INFO     | [payload] validate_post thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,642 | INFO     | [payload] failed_post thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,683 | INFO     | [job] control thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,687 | INFO     | [data] control thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,808 | INFO     | [job] validate thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:43:26] 2026-04-28 12:42:31,860 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:31,956 | INFO     | [data] copytool_out thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:32,076 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:32,857 | INFO     | [job] queue monitor thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:34,698 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:40,416 | INFO     | job.realtimelogging is not enabled
[2026-04-28 14:43:26] 2026-04-28 12:42:41,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 14:43:26] 2026-04-28 12:42:59,950 | INFO     | PID=805 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-04-28 14:43:26] 2026-04-28 12:42:59,950 | INFO     | .. there are 2 such processes running
[2026-04-28 14:43:26] 2026-04-28 12:42:59,957 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 14:43:26] 2026-04-28 12:42:59,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 14:43:26] 2026-04-28 12:42:59,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 14:43:26] 2026-04-28 12:43:14,319 | INFO     | [monitor] cgroup control has ended
[2026-04-28 14:43:26] 2026-04-28 12:43:16,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372422494016)>', '<ExcThread(monitor, started 140371996694272)>']
[2026-04-28 14:43:26] 2026-04-28 12:43:17,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 14:43:26] 2026-04-28 12:43:17,057 | INFO     | [monitor] control thread has ended
[2026-04-28 14:43:26] 2026-04-28 12:43:21,129 | INFO     | all workflow threads have been joined
[2026-04-28 14:43:26] 2026-04-28 12:43:21,130 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 14:43:26] 2026-04-28 12:43:21,130 | INFO     | traces error code: 0
[2026-04-28 14:43:26] 2026-04-28 12:43:21,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 14:43:26] 2026-04-28 12:43:21,396 [wrapper] ==== pilot stdout END ====
[2026-04-28 14:43:26] 2026-04-28 12:43:21,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 14:43:26] 2026-04-28 12:43:21,635 [wrapper] pilotpid: 805
[2026-04-28 14:43:26] 2026-04-28 12:43:21,734 [wrapper] Pilot exit status: 0
[2026-04-28 14:43:26] 2026-04-28 12:43:22,117 [wrapper] pandaids: 7116258904
[2026-04-28 14:43:26] 2026-04-28 12:43:23,261 [wrapper] cleanup supervisor_pilot 12433 806
[2026-04-28 14:43:26] 2026-04-28 12:43:23,388 [wrapper] Test setup, not cleaning
[2026-04-28 14:43:26] 2026-04-28 12:43:23,451 [wrapper] apfmon messages muted
[2026-04-28 14:43:26] 2026-04-28 12:43:23,535 [wrapper] ==== wrapper stdout END ====
[2026-04-28 14:43:26] 2026-04-28 12:43:23,652 [wrapper] ==== wrapper stderr END ====
[2026-04-28 14:43:26]  *** Error codes and diagnostics ***
[2026-04-28 14:43:26]     "exeErrorCode": 0,
[2026-04-28 14:43:26]     "pilotErrorCode": 0,
[2026-04-28 14:43:26]  *** Listing of results directory ***
[2026-04-28 14:43:26] total 493748
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc    683926 Apr 27 14:07 pilot3.tar.gz
[2026-04-28 14:43:26] -rwx------. 1 boinc boinc     36322 Apr 27 14:10 runpilot2-wrapper.sh
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc      5631 Apr 27 14:11 queuedata.json
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc       100 Apr 28 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 14:43:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 10:23 run_atlas
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc       105 Apr 28 10:23 job.xml
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc      6306 Apr 28 10:23 init_data.xml
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc 291050289 Apr 28 10:23 EVNT.49912704._000011.pool.root.1
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc     15667 Apr 28 10:23 start_atlas.sh
[2026-04-28 14:43:26] drwxrwx--x. 2 boinc boinc        68 Apr 28 10:23 shared
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc    697425 Apr 28 10:23 input.tar.gz
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc         0 Apr 28 10:23 boinc_lockfile
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc      2619 Apr 28 10:23 pandaJob.out
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc       415 Apr 28 10:30 workernode_map.json
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc    992913 Apr 28 10:30 agis_schedconf.cvmfs.json
[2026-04-28 14:43:26] drwx------. 5 boinc boinc      4096 Apr 28 10:30 pilot3
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc 206813907 Apr 28 14:40 HITS.49912707._000268.pool.root.1
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc       489 Apr 28 14:41 boinc_task_state.xml
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc      1012 Apr 28 14:42 memory_monitor_summary.json
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc   1512704 Apr 28 14:42 agis_ddmendpoints.agis.ALL.json
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc    405904 Apr 28 14:42 log.49912707._000268.job.log.tgz.1
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc      6329 Apr 28 14:42 heartbeat_new.json
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc      6220 Apr 28 14:42 heartbeat.json
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc        95 Apr 28 14:42 pilot_heartbeat.json
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc        28 Apr 28 14:43 wrapper_checkpoint.txt
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc      8192 Apr 28 14:43 boinc_mmap_file
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc      5139 Apr 28 14:43 pilotlog.txt
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc   1401741 Apr 28 14:43 log.49912707._000268.job.log.1
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc       357 Apr 28 14:43 output.list
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc       410 Apr 28 14:43 runtime_log
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc   1822720 Apr 28 14:43 result.tar.gz
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc      8439 Apr 28 14:43 runtime_log.err
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc       655 Apr 28 14:43 522d255f6dbc.diag
[2026-04-28 14:43:26] -rw-r--r--. 1 boinc boinc     20611 Apr 28 14:43 stderr.txt
[2026-04-28 14:43:26] HITS file was successfully produced:
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc 206813907 Apr 28 14:40 shared/HITS.pool.root.1
[2026-04-28 14:43:26]  *** Contents of shared directory: ***
[2026-04-28 14:43:26] total 488680
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc 291050289 Apr 28 10:23 ATLAS.root_0
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc     15667 Apr 28 10:23 start_atlas.sh
[2026-04-28 14:43:26] -rw-r--r--. 2 boinc boinc    697425 Apr 28 10:23 input.tar.gz
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc 206813907 Apr 28 14:40 HITS.pool.root.1
[2026-04-28 14:43:26] -rw-------. 1 boinc boinc   1822720 Apr 28 14:43 result.tar.gz
14:43:28 (29248): run_atlas exited; CPU time 55889.420629
14:43:28 (29248): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN