Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:39:51 (3688449): wrapper (7.7.26015): starting
11:39:51 (3688449): wrapper: running run_atlas (--nthreads 12)
[2026-04-28 11:39:51] Arguments: --nthreads 12
[2026-04-28 11:39:51] Threads: 12
[2026-04-28 11:39:51] Checking for CVMFS
[2026-04-28 11:39:51] No cvmfs_config command found, will try listing directly
[2026-04-28 11:39:51] CVMFS is ok
[2026-04-28 11:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 11:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 11:39:51] Further information can be found at the LHC@home message board.
[2026-04-28 11:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 11:39:51] Checking for apptainer binary...
[2026-04-28 11:39:51] which: no apptainer in ((null))
[2026-04-28 11:39:51] apptainer is not installed, using version from CVMFS
[2026-04-28 11:39:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 11:39:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot132/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-04-28 11:39:51] apptainer works
[2026-04-28 11:39:51] Set ATHENA_PROC_NUMBER=12
[2026-04-28 11:39:51] Set ATHENA_CORE_NUMBER=12
[2026-04-28 11:39:51] Starting ATLAS job with PandaID=7116272631
[2026-04-28 11:39:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot132/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 12:05:52]  *** The last 200 lines of the pilot log: ***
[2026-04-28 12:05:52]  filesize=347214
[2026-04-28 12:05:52]  filetype=log
[2026-04-28 12:05:52]  guid=d8e0fcee-ca34-4721-92ed-e373c499bb59
[2026-04-28 12:05:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-28 12:05:52]  is_altstaged=None
[2026-04-28 12:05:52]  is_tar=False
[2026-04-28 12:05:52]  lfn=log.49888810._000151.job.log.tgz.1
[2026-04-28 12:05:52]  mtime=0
[2026-04-28 12:05:52]  protocol_id=None
[2026-04-28 12:05:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-28 12:05:52]  replicas=None
[2026-04-28 12:05:52]  scope=mc23_13p6TeV
[2026-04-28 12:05:52]  status=None
[2026-04-28 12:05:52]  status_code=0
[2026-04-28 12:05:52]  storage_token=
[2026-04-28 12:05:52]  surl=/var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7116272631/log.49888810._000151.job.log.tgz.1
[2026-04-28 12:05:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/39/log.49888810._000151.job.log.tgz.1
[2026-04-28 12:05:52]  workdir=None
[2026-04-28 12:05:52] ]
[2026-04-28 12:05:52] 2026-04-28 10:03:59,234 | INFO     | transferring file log.49888810._000151.job.log.tgz.1 from /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7116272631/log.49888810._000151.job.log.tgz.1 to /var/lib/
[2026-04-28 12:05:52] 2026-04-28 10:03:59,234 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7116272631/log.49888810._000151.job.log.tgz.1 /var/lib/boinc/var/slot132/slots/1/
[2026-04-28 12:05:52] 2026-04-28 10:03:59,250 | INFO     | adding to output.list: log.49888810._000151.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/39/log.49888810._000151.job.log.tg
[2026-04-28 12:05:52] 2026-04-28 10:03:59,251 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 12:05:52] 2026-04-28 10:03:59,251 | INFO     | summary of transferred files:
[2026-04-28 12:05:52] 2026-04-28 10:03:59,251 | INFO     |  -- lfn=log.49888810._000151.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 12:05:52] 2026-04-28 10:03:59,251 | INFO     | stage-out finished correctly
[2026-04-28 12:05:52] 2026-04-28 10:04:01,510 | INFO     | monitor loop #112: job 0:7116272631 is in state 'finished'
[2026-04-28 12:05:52] 2026-04-28 10:04:01,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 12:05:52] 2026-04-28 10:04:02,206 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 12:05:52] 2026-04-28 10:04:03,997 | INFO     | job 7116272631 has state=finished
[2026-04-28 12:05:52] 2026-04-28 10:04:03,997 | INFO     | preparing for final server update for job 7116272631 in state='finished'
[2026-04-28 12:05:52] 2026-04-28 10:04:03,997 | INFO     | reading metadata from: /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7116272631/jobReport.json
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot132/slots/1/workernode_map.json
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | this job has now completed (state=finished)
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | log transfer has been attempted: DONE
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | job 7116272631 has finished - writing final server update
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2142384/.job.ad'
[2026-04-28 12:05:52] 2026-04-28 10:04:03,999 | INFO     | total number of processed events: 400 (read)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,014 | INFO     | monitor loop #113: job 0:7116272631 is in state 'finished'
[2026-04-28 12:05:52] 2026-04-28 10:04:04,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,017 | INFO     | using path: /var/lib/boinc/var/slot132/slots/1/PanDA_Pilot-7116272631/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,017 | INFO     | extracted standard info from prmon json
[2026-04-28 12:05:52] 2026-04-28 10:04:04,017 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | fitting pss+swap vs Time
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | sum of square deviations: 1518168.0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | sum of deviations: -29206190.000000004
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | mean x (centered): 0.0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | mean y: 2710945.411764706
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | intersect: 2710945.411764706
[2026-04-28 12:05:52] 2026-04-28 10:04:04,018 | INFO     | chi2: 0.00020367761761198093
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | current memory leak: -19.24 B/s (using 17 data points, chi2=0.00)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | could have reported an average CPU frequency of 3577 MHz (4 samples)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | ..............................
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . Timing measurements:
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . get job = 0 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . initial setup = 4 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . payload setup = 6 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . stage-in = 0 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . payload execution = 1414 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . stage-out = 0 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | . log creation = 0 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,019 | INFO     | ..............................
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | 
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | job summary report
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | --------------------------------------------------
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | PanDA job id: 7116272631
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | task id: 49888810
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | errors: (none)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | pilot state: finished 
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | transexitcode: 0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | exeerrorcode: 0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | exeerrordiag: 
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | exitcode: 0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | exitmsg: OK
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | cpuconsumptiontime: 14164 s
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | nevents: 400
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | neventsw: 0
[2026-04-28 12:05:52] 2026-04-28 10:04:04,067 | INFO     | pid: 3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | pgrp: 3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | corecount: 12
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | event service: False
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | sizes: {0: 2282527, 11: 2282527, 1424: 2307313, 1425: 2316335, 1428: 2316391, 1430: 2316585}
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | --------------------------------------------------
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | 
[2026-04-28 12:05:52] 2026-04-28 10:04:04,068 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot132/slots/1
[2026-04-28 12:05:52] 2026-04-28 10:04:04,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | job 7116272631 has completed (purged errors)
[2026-04-28 12:05:52] 2026-04-28 10:04:04,088 | INFO     | overall cleanup function is called
[2026-04-28 12:05:52] 2026-04-28 10:04:05,096 | INFO     | --- collectZombieJob: --- 10, [3699029]
[2026-04-28 12:05:52] 2026-04-28 10:04:05,096 | INFO     | zombie collector waiting for pid 3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:05,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 12:05:52] 2026-04-28 10:04:05,096 | INFO     | collected zombie processes
[2026-04-28 12:05:52] 2026-04-28 10:04:05,096 | INFO     | will attempt to kill all subprocesses of pid=3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:06,134 | INFO     | PID=3692992 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-28 12:05:52] 2026-04-28 10:04:06,134 | INFO     | .. there are 15 such processes running
[2026-04-28 12:05:52] 2026-04-28 10:04:06,153 | INFO     | process IDs to be killed: [3699029] (in reverse order)
[2026-04-28 12:05:52] 2026-04-28 10:04:06,324 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 12:05:52] 2026-04-28 10:04:06,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 12:05:52] 2026-04-28 10:04:06,349 | INFO     | did not find any defunct processes belonging to 3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:06,374 | INFO     | did not find any defunct processes belonging to 3699029
[2026-04-28 12:05:52] 2026-04-28 10:04:06,374 | INFO     | Ready for new job
[2026-04-28 12:05:52] 2026-04-28 10:04:06,375 | INFO     | ***************************************
[2026-04-28 12:05:52] 2026-04-28 10:04:06,375 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 12:05:52] 2026-04-28 10:04:06,375 | INFO     | ***************************************
[2026-04-28 12:05:52] 2026-04-28 10:04:06,375 | INFO     | 
[2026-04-28 12:05:52] 2026-04-28 10:04:06,381 | INFO     | architecture information:
[2026-04-28 12:05:52] 2026-04-28 10:04:06,382 | INFO     | executing command: cat /etc/os-release
[2026-04-28 12:05:52] 2026-04-28 10:04:06,396 | INFO     | cat /etc/os-release:
[2026-04-28 12:05:52] NAME="CentOS Linux"
[2026-04-28 12:05:52] VERSION="7 (Core)"
[2026-04-28 12:05:52] ID="centos"
[2026-04-28 12:05:52] ID_LIKE="rhel fedora"
[2026-04-28 12:05:52] VERSION_ID="7"
[2026-04-28 12:05:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 12:05:52] ANSI_COLOR="0;31"
[2026-04-28 12:05:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 12:05:52] HOME_URL="https://www.centos.org/"
[2026-04-28 12:05:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 12:05:52] 
[2026-04-28 12:05:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 12:05:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 12:05:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 12:05:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 12:05:52] 
[2026-04-28 12:05:52] 2026-04-28 10:04:06,396 | INFO     | ***************************************
[2026-04-28 12:05:52] 2026-04-28 10:04:06,899 | INFO     | executing command: df -mP /var/lib/boinc/var/slot132/slots/1
[2026-04-28 12:05:52] 2026-04-28 10:04:06,915 | INFO     | sufficient remaining disk space (22022193152 B)
[2026-04-28 12:05:52] 2026-04-28 10:04:06,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 12:05:52] 2026-04-28 10:04:06,915 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | INFO     | update_server=False
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 12:05:52] 2026-04-28 10:04:06,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 12:05:52] 2026-04-28 10:04:06,972 | INFO     | all payload control threads have been joined
[2026-04-28 12:05:52] 2026-04-28 10:04:07,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 12:05:52] 2026-04-28 10:04:07,391 | INFO     | all job control threads have been joined
[2026-04-28 12:05:52] 2026-04-28 10:04:07,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:05:52] 2026-04-28 10:04:07,521 | INFO     | aborting loop
[2026-04-28 12:05:52] 2026-04-28 10:04:07,667 | INFO     | all data control threads have been joined
[2026-04-28 12:05:52] 2026-04-28 10:04:07,921 | INFO     | [job] retrieve thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:07,976 | INFO     | [payload] control thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 12:05:52] 2026-04-28 10:04:08,397 | INFO     | [job] control thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,526 | INFO     | [job] job monitor thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,673 | INFO     | [data] control thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,748 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,797 | INFO     | [job] validate thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,886 | INFO     | [payload] failed_post thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:08,952 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:09,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:09,061 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:09,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:05:52] 2026-04-28 10:04:09,188 | INFO     | [data] copytool_in thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:09,315 | INFO     | [data] copytool_out thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:09,389 | INFO     | [payload] validate_post thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:10,083 | INFO     | [job] queue monitor thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:04:12,266 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 12:05:52] 2026-04-28 10:05:05,102 | INFO     | [monitor] cgroup control has ended
[2026-04-28 12:05:52] 2026-04-28 10:05:05,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22431593744192)>', '<ExcThread(monitor, started 22431353018112)>']
[2026-04-28 12:05:52] 2026-04-28 10:05:06,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 12:05:52] 2026-04-28 10:05:06,213 | INFO     | [monitor] control thread has ended
[2026-04-28 12:05:52] 2026-04-28 10:05:10,714 | INFO     | all workflow threads have been joined
[2026-04-28 12:05:52] 2026-04-28 10:05:10,719 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 12:05:52] 2026-04-28 10:05:10,720 | INFO     | traces error code: 0
[2026-04-28 12:05:52] 2026-04-28 10:05:10,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 12:05:52] 2026-04-28 10:05:10,908 [wrapper] ==== pilot stdout END ====
[2026-04-28 12:05:52] 2026-04-28 10:05:10,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 12:05:52] 2026-04-28 10:05:10,912 [wrapper] pilotpid: 3692992
[2026-04-28 12:05:52] 2026-04-28 10:05:10,913 [wrapper] Pilot exit status: 0
[2026-04-28 12:05:52] 2026-04-28 10:05:10,920 [wrapper] pandaids: 7116272631
[2026-04-28 12:05:52] 2026-04-28 10:05:11,040 [wrapper] cleanup supervisor_pilot 3848207 3692993
[2026-04-28 12:05:52] 2026-04-28 10:05:11,042 [wrapper] Test setup, not cleaning
[2026-04-28 12:05:52] 2026-04-28 10:05:11,044 [wrapper] apfmon messages muted
[2026-04-28 12:05:52] 2026-04-28 10:05:11,046 [wrapper] ==== wrapper stdout END ====
[2026-04-28 12:05:52] 2026-04-28 10:05:11,048 [wrapper] ==== wrapper stderr END ====
[2026-04-28 12:05:52]  *** Error codes and diagnostics ***
[2026-04-28 12:05:52]     "exeErrorCode": 0,
[2026-04-28 12:05:52]     "pilotErrorCode": 0,
[2026-04-28 12:05:52]  *** Listing of results directory ***
[2026-04-28 12:05:52] total 1252628
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc       5631 Apr 27 18:28 queuedata.json
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc     683926 Apr 27 18:28 pilot3.tar.gz
[2026-04-28 12:05:52] -rwx------. 1 boinc boinc      36322 Apr 27 18:28 runpilot2-wrapper.sh
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc        100 Apr 28 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 12:05:52] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 11:39 run_atlas
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc        105 Apr 28 11:39 job.xml
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc       6630 Apr 28 11:39 init_data.xml
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc 1133134041 Apr 28 11:39 EVNT.49888808._000002.pool.root.1
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc      15667 Apr 28 11:39 start_atlas.sh
[2026-04-28 12:05:52] drwxrwx--x. 2 boinc boinc       4096 Apr 28 11:39 shared
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc     697409 Apr 28 11:39 input.tar.gz
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc          0 Apr 28 11:39 boinc_lockfile
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc       2575 Apr 28 11:39 pandaJob.out
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc     992901 Apr 28 11:39 agis_schedconf.cvmfs.json
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc    1512704 Apr 28 11:39 agis_ddmendpoints.agis.ALL.json
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc        445 Apr 28 11:40 workernode_map.json
[2026-04-28 12:05:52] drwx------. 5 boinc boinc       4096 Apr 28 11:40 pilot3
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc         95 Apr 28 12:03 pilot_heartbeat.json
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc        487 Apr 28 12:03 boinc_task_state.xml
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc  144359310 Apr 28 12:03 HITS.49888810._000151.pool.root.1
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc       1034 Apr 28 12:03 memory_monitor_summary.json
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc     347214 Apr 28 12:03 log.49888810._000151.job.log.tgz.1
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc       6381 Apr 28 12:04 heartbeat_new.json
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc       6272 Apr 28 12:04 heartbeat.json
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc       4561 Apr 28 12:05 pilotlog.txt
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc     184043 Apr 28 12:05 log.49888810._000151.job.log.1
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc        357 Apr 28 12:05 output.list
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc        410 Apr 28 12:05 runtime_log
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc     552960 Apr 28 12:05 result.tar.gz
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc       8846 Apr 28 12:05 runtime_log.err
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc        657 Apr 28 12:05 8ebb516270d3.diag
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc         26 Apr 28 12:05 wrapper_checkpoint.txt
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc       8192 Apr 28 12:05 boinc_mmap_file
[2026-04-28 12:05:52] -rw-r--r--. 1 boinc boinc      21079 Apr 28 12:05 stderr.txt
[2026-04-28 12:05:52] HITS file was successfully produced:
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc 144359310 Apr 28 12:03 shared/HITS.pool.root.1
[2026-04-28 12:05:52]  *** Contents of shared directory: ***
[2026-04-28 12:05:52] total 1248804
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc 1133134041 Apr 28 11:39 ATLAS.root_0
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc      15667 Apr 28 11:39 start_atlas.sh
[2026-04-28 12:05:52] -rw-r--r--. 2 boinc boinc     697409 Apr 28 11:39 input.tar.gz
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc  144359310 Apr 28 12:03 HITS.pool.root.1
[2026-04-28 12:05:52] -rw-------. 1 boinc boinc     552960 Apr 28 12:05 result.tar.gz
12:05:53 (3688449): run_atlas exited; CPU time 14201.287731
12:05:53 (3688449): called boinc_finish(0)

</stderr_txt>
]]>

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