Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:32:42 (3803551): wrapper (7.7.26015): starting
16:32:42 (3803551): wrapper: running run_atlas (--nthreads 12)
[2026-04-28 16:32:42] Arguments: --nthreads 12
[2026-04-28 16:32:42] Threads: 12
[2026-04-28 16:32:42] Checking for CVMFS
[2026-04-28 16:32:42] No cvmfs_config command found, will try listing directly
[2026-04-28 16:32:42] CVMFS is ok
[2026-04-28 16:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 16:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 16:32:42] Further information can be found at the LHC@home message board.
[2026-04-28 16:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 16:32:42] Checking for apptainer binary...
[2026-04-28 16:32:42] which: no apptainer in ((null))
[2026-04-28 16:32:42] apptainer is not installed, using version from CVMFS
[2026-04-28 16:32:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 16:32:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-04-28 16:32:42] apptainer works
[2026-04-28 16:32:42] Set ATHENA_PROC_NUMBER=12
[2026-04-28 16:32:42] Set ATHENA_CORE_NUMBER=12
[2026-04-28 16:32:42] Starting ATLAS job with PandaID=7116189708
[2026-04-28 16:32:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 17:18:54]  *** The last 200 lines of the pilot log: ***
[2026-04-28 17:18:54]  domain=
[2026-04-28 17:18:54]  filesize=432278
[2026-04-28 17:18:54]  filetype=log
[2026-04-28 17:18:54]  guid=9662121c-8095-4e09-b64c-0e21625d1739
[2026-04-28 17:18:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-28 17:18:54]  is_altstaged=None
[2026-04-28 17:18:54]  is_tar=False
[2026-04-28 17:18:54]  lfn=log.49820375._014409.job.log.tgz.1
[2026-04-28 17:18:54]  mtime=0
[2026-04-28 17:18:54]  protocol_id=None
[2026-04-28 17:18:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-28 17:18:54]  replicas=None
[2026-04-28 17:18:54]  scope=mc23_13p6TeV
[2026-04-28 17:18:54]  status=None
[2026-04-28 17:18:54]  status_code=0
[2026-04-28 17:18:54]  storage_token=
[2026-04-28 17:18:54]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7116189708/log.49820375._014409.job.log.tgz.1
[2026-04-28 17:18:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/b0/log.49820375._014409.job.log.tgz.1
[2026-04-28 17:18:54]  workdir=None
[2026-04-28 17:18:54] ]
[2026-04-28 17:18:54] 2026-04-28 15:17:23,986 | INFO     | transferring file log.49820375._014409.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7116189708/log.49820375._014409.job.log.tgz.1 to /var/lib/
[2026-04-28 17:18:54] 2026-04-28 15:17:23,986 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7116189708/log.49820375._014409.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-04-28 17:18:54] 2026-04-28 15:17:23,999 | INFO     | adding to output.list: log.49820375._014409.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/b0/log.49820375._014409.job.log.tg
[2026-04-28 17:18:54] 2026-04-28 15:17:24,000 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 17:18:54] 2026-04-28 15:17:24,000 | INFO     | summary of transferred files:
[2026-04-28 17:18:54] 2026-04-28 15:17:24,000 | INFO     |  -- lfn=log.49820375._014409.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 17:18:54] 2026-04-28 15:17:24,000 | INFO     | stage-out finished correctly
[2026-04-28 17:18:54] 2026-04-28 15:17:24,240 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 17:18:54] 2026-04-28 15:17:25,644 | INFO     | job 7116189708 has state=finished
[2026-04-28 17:18:54] 2026-04-28 15:17:25,645 | INFO     | preparing for final server update for job 7116189708 in state='finished'
[2026-04-28 17:18:54] 2026-04-28 15:17:26,196 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,196 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7116189708/jobReport.json
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | this job has now completed (state=finished)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | log transfer has been attempted: DONE
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | job 7116189708 has finished - writing final server update
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1901541/.job.ad'
[2026-04-28 17:18:54] 2026-04-28 15:17:26,198 | INFO     | total number of processed events: 400 (read)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,215 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7116189708/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,215 | INFO     | extracted standard info from prmon json
[2026-04-28 17:18:54] 2026-04-28 15:17:26,215 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 17:18:54] 2026-04-28 15:17:26,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 17:18:54] 2026-04-28 15:17:26,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | fitting pss+swap vs Time
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | sum of square deviations: 15695178.0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | sum of deviations: 175332788.0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | mean x (centered): 0.0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | mean y: 2802029.2702702703
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | intersect: 2802029.2702702703
[2026-04-28 17:18:54] 2026-04-28 15:17:26,216 | INFO     | chi2: 0.000148674620840516
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | current memory leak: 11.17 B/s (using 37 data points, chi2=0.00)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | could have reported an average CPU frequency of 3664 MHz (5 samples)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | ..............................
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . Timing measurements:
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . get job = 0 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . initial setup = 3 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . payload setup = 6 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . stage-in = 0 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . payload execution = 2650 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . stage-out = 0 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | . log creation = 0 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,217 | INFO     | ..............................
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | 
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | job summary report
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | --------------------------------------------------
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | PanDA job id: 7116189708
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | task id: 49820375
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | errors: (none)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | pilot state: finished 
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | transexitcode: 0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | exeerrorcode: 0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | exeerrordiag: 
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | exitcode: 0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | exitmsg: OK
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | cpuconsumptiontime: 29119 s
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | nevents: 400
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | neventsw: 0
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | pid: 3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | pgrp: 3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | corecount: 12
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | event service: False
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | sizes: {0: 2282524, 11: 2282524, 2660: 2307810, 2661: 2316888, 2663: 2317058}
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | --------------------------------------------------
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | 
[2026-04-28 17:18:54] 2026-04-28 15:17:26,533 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-04-28 17:18:54] 2026-04-28 15:17:26,545 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | job 7116189708 has completed (purged errors)
[2026-04-28 17:18:54] 2026-04-28 15:17:26,546 | INFO     | overall cleanup function is called
[2026-04-28 17:18:54] 2026-04-28 15:17:27,554 | INFO     | --- collectZombieJob: --- 10, [3842440]
[2026-04-28 17:18:54] 2026-04-28 15:17:27,554 | INFO     | zombie collector waiting for pid 3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:27,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 17:18:54] 2026-04-28 15:17:27,554 | INFO     | collected zombie processes
[2026-04-28 17:18:54] 2026-04-28 15:17:27,554 | INFO     | will attempt to kill all subprocesses of pid=3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:27,842 | INFO     | process IDs to be killed: [3842440] (in reverse order)
[2026-04-28 17:18:54] 2026-04-28 15:17:27,993 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 17:18:54] 2026-04-28 15:17:27,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 17:18:54] 2026-04-28 15:17:28,022 | INFO     | did not find any defunct processes belonging to 3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:28,045 | INFO     | did not find any defunct processes belonging to 3842440
[2026-04-28 17:18:54] 2026-04-28 15:17:28,045 | INFO     | Ready for new job
[2026-04-28 17:18:54] 2026-04-28 15:17:28,046 | INFO     | ***************************************
[2026-04-28 17:18:54] 2026-04-28 15:17:28,047 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 17:18:54] 2026-04-28 15:17:28,047 | INFO     | ***************************************
[2026-04-28 17:18:54] 2026-04-28 15:17:28,047 | INFO     | 
[2026-04-28 17:18:54] 2026-04-28 15:17:28,052 | INFO     | architecture information:
[2026-04-28 17:18:54] 2026-04-28 15:17:28,052 | INFO     | executing command: cat /etc/os-release
[2026-04-28 17:18:54] 2026-04-28 15:17:28,069 | INFO     | cat /etc/os-release:
[2026-04-28 17:18:54] NAME="CentOS Linux"
[2026-04-28 17:18:54] VERSION="7 (Core)"
[2026-04-28 17:18:54] ID="centos"
[2026-04-28 17:18:54] ID_LIKE="rhel fedora"
[2026-04-28 17:18:54] VERSION_ID="7"
[2026-04-28 17:18:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 17:18:54] ANSI_COLOR="0;31"
[2026-04-28 17:18:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 17:18:54] HOME_URL="https://www.centos.org/"
[2026-04-28 17:18:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 17:18:54] 
[2026-04-28 17:18:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 17:18:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 17:18:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 17:18:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 17:18:54] 
[2026-04-28 17:18:54] 2026-04-28 15:17:28,069 | INFO     | ***************************************
[2026-04-28 17:18:54] 2026-04-28 15:17:28,572 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-04-28 17:18:54] 2026-04-28 15:17:28,583 | INFO     | sufficient remaining disk space (16705912832 B)
[2026-04-28 17:18:54] 2026-04-28 15:17:28,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 17:18:54] 2026-04-28 15:17:28,584 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 17:18:54] 2026-04-28 15:17:28,584 | INFO     | update_server=False
[2026-04-28 17:18:54] 2026-04-28 15:17:28,584 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 17:18:54] 2026-04-28 15:17:28,774 | INFO     | all data control threads have been joined
[2026-04-28 17:18:54] 2026-04-28 15:17:28,786 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 17:18:54] 2026-04-28 15:17:28,786 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 17:18:54] 2026-04-28 15:17:28,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 17:18:54] 2026-04-28 15:17:28,786 | INFO     | will abort loop
[2026-04-28 17:18:54] 2026-04-28 15:17:29,102 | INFO     | all payload control threads have been joined
[2026-04-28 17:18:54] 2026-04-28 15:17:29,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 17:18:54] 2026-04-28 15:17:29,589 | INFO     | [job] retrieve thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:29,779 | INFO     | [data] control thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:29,791 | INFO     | [job] job monitor thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:29,840 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,103 | INFO     | all job control threads have been joined
[2026-04-28 17:18:54] 2026-04-28 15:17:30,108 | INFO     | [payload] control thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,286 | INFO     | [payload] validate_post thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 17:18:54] 2026-04-28 15:17:30,608 | INFO     | [job] validate thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,790 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,792 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,814 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:30,970 | INFO     | [data] copytool_in thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:31,104 | INFO     | [job] control thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:31,184 | INFO     | [payload] failed_post thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:31,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 17:18:54] 2026-04-28 15:17:31,559 | INFO     | [data] copytool_out thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:32,277 | INFO     | [job] queue monitor thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:34,303 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 17:18:54] 2026-04-28 15:17:47,670 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-04-28 17:18:54] 2026-04-28 15:17:55,392 | INFO     | [monitor] cgroup control has ended
[2026-04-28 17:18:54] 2026-04-28 15:17:55,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22978793064256)>', '<ExcThread(monitor, started 22978556606208)>']
[2026-04-28 17:18:54] 2026-04-28 15:17:58,072 | INFO     | PID=3813721 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 17:18:54] 2026-04-28 15:17:58,072 | INFO     | .. there are 11 such processes running
[2026-04-28 17:18:54] 2026-04-28 15:17:58,073 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 17:18:54] 2026-04-28 15:17:58,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 17:18:54] 2026-04-28 15:17:58,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 17:18:54] 2026-04-28 15:17:58,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 17:18:54] 2026-04-28 15:17:58,073 | INFO     | [monitor] control thread has ended
[2026-04-28 17:18:54] 2026-04-28 15:18:00,520 | INFO     | all workflow threads have been joined
[2026-04-28 17:18:54] 2026-04-28 15:18:00,520 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 17:18:54] 2026-04-28 15:18:00,520 | INFO     | traces error code: 0
[2026-04-28 17:18:54] 2026-04-28 15:18:00,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 17:18:54] 2026-04-28 15:18:00,632 [wrapper] ==== pilot stdout END ====
[2026-04-28 17:18:54] 2026-04-28 15:18:00,635 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 17:18:54] 2026-04-28 15:18:00,641 [wrapper] pilotpid: 3813721
[2026-04-28 17:18:54] 2026-04-28 15:18:00,643 [wrapper] Pilot exit status: 0
[2026-04-28 17:18:54] 2026-04-28 15:18:00,651 [wrapper] pandaids: 7116189708
[2026-04-28 17:18:54] 2026-04-28 15:18:00,759 [wrapper] cleanup supervisor_pilot 4074904 3813722
[2026-04-28 17:18:54] 2026-04-28 15:18:00,762 [wrapper] Test setup, not cleaning
[2026-04-28 17:18:54] 2026-04-28 15:18:00,764 [wrapper] apfmon messages muted
[2026-04-28 17:18:54] 2026-04-28 15:18:00,766 [wrapper] ==== wrapper stdout END ====
[2026-04-28 17:18:54] 2026-04-28 15:18:00,768 [wrapper] ==== wrapper stderr END ====
[2026-04-28 17:18:54]  *** Error codes and diagnostics ***
[2026-04-28 17:18:54]     "exeErrorCode": 0,
[2026-04-28 17:18:54]     "pilotErrorCode": 0,
[2026-04-28 17:18:54]  *** Listing of results directory ***
[2026-04-28 17:18:54] total 2461056
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc       5631 Apr 26 23:06 queuedata.json
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc     683926 Apr 26 23:06 pilot3.tar.gz
[2026-04-28 17:18:54] -rwx------. 1 boinc boinc      36322 Apr 26 23:06 runpilot2-wrapper.sh
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc        100 Apr 28 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 17:18:54] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 16:32 run_atlas
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc        105 Apr 28 16:32 job.xml
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc       6630 Apr 28 16:32 init_data.xml
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc 2239981223 Apr 28 16:32 EVNT.49820373._000027.pool.root.1
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc      15667 Apr 28 16:32 start_atlas.sh
[2026-04-28 17:18:54] drwxrwx--x. 2 boinc boinc       4096 Apr 28 16:32 shared
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc     697430 Apr 28 16:32 input.tar.gz
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc          0 Apr 28 16:32 boinc_lockfile
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc       2584 Apr 28 16:32 pandaJob.out
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc     993626 Apr 28 16:32 agis_schedconf.cvmfs.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc    1512704 Apr 28 16:32 agis_ddmendpoints.agis.ALL.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc        442 Apr 28 16:32 workernode_map.json
[2026-04-28 17:18:54] drwx------. 5 boinc boinc       4096 Apr 28 16:32 pilot3
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc        487 Apr 28 17:16 boinc_task_state.xml
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc  274548893 Apr 28 17:16 HITS.49820375._014409.pool.root.1
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc       1030 Apr 28 17:17 memory_monitor_summary.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc     432278 Apr 28 17:17 log.49820375._014409.job.log.tgz.1
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc       6375 Apr 28 17:17 heartbeat_new.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc       6266 Apr 28 17:17 heartbeat.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc         95 Apr 28 17:17 pilot_heartbeat.json
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc       5019 Apr 28 17:18 pilotlog.txt
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc     293370 Apr 28 17:18 log.49820375._014409.job.log.1
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc        357 Apr 28 17:18 output.list
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc        410 Apr 28 17:18 runtime_log
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc     747520 Apr 28 17:18 result.tar.gz
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc       8846 Apr 28 17:18 runtime_log.err
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc        659 Apr 28 17:18 7e4f8ff6790e.diag
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc         26 Apr 28 17:18 wrapper_checkpoint.txt
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc       8192 Apr 28 17:18 boinc_mmap_file
[2026-04-28 17:18:54] -rw-r--r--. 1 boinc boinc      20879 Apr 28 17:18 stderr.txt
[2026-04-28 17:18:54] HITS file was successfully produced:
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc 274548893 Apr 28 17:16 shared/HITS.pool.root.1
[2026-04-28 17:18:54]  *** Contents of shared directory: ***
[2026-04-28 17:18:54] total 2457040
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc 2239981223 Apr 28 16:32 ATLAS.root_0
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc      15667 Apr 28 16:32 start_atlas.sh
[2026-04-28 17:18:54] -rw-r--r--. 2 boinc boinc     697430 Apr 28 16:32 input.tar.gz
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc  274548893 Apr 28 17:16 HITS.pool.root.1
[2026-04-28 17:18:54] -rw-------. 1 boinc boinc     747520 Apr 28 17:18 result.tar.gz
17:18:55 (3803551): run_atlas exited; CPU time 29200.962281
17:18:55 (3803551): called boinc_finish(0)

</stderr_txt>
]]>

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