Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:23 (3780511): wrapper (7.7.26015): starting
21:38:23 (3780511): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 21:38:23] Arguments: --nthreads 12
[2026-04-27 21:38:23] Threads: 12
[2026-04-27 21:38:23] Checking for CVMFS
[2026-04-27 21:38:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 21:38:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 21:38:23] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 21:38:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 21:38:23] 2.13.3.0 84518 7540 72748 158939 2 188 15513962 46080000 10262 130560 0 32495116 99.993 649144 43296 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-04-27 21:38:23] CVMFS is ok
[2026-04-27 21:38:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 21:38:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 21:38:23] Further information can be found at the LHC@home message board.
[2026-04-27 21:38:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 21:38:23] Checking for apptainer binary...
[2026-04-27 21:38:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 21:38:23] Running /usr/bin/apptainer --version
[2026-04-27 21:38:23] apptainer version 1.4.5-3.el9
[2026-04-27 21:38:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 21:38:23] gpu02.farm.particle.cz
[2026-04-27 21:38:23] apptainer works
[2026-04-27 21:38:23] Set ATHENA_PROC_NUMBER=12
[2026-04-27 21:38:23] Set ATHENA_CORE_NUMBER=12
[2026-04-27 21:38:23] Starting ATLAS job with PandaID=7104821304
[2026-04-27 21:38:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 22:05:37]  *** The last 200 lines of the pilot log: ***
[2026-04-27 22:05:37]  direct_access_wan=False
[2026-04-27 22:05:37]  domain=
[2026-04-27 22:05:37]  filesize=328224
[2026-04-27 22:05:37]  filetype=log
[2026-04-27 22:05:37]  guid=6a68719a-43fd-447a-9c59-36fa4bceb8e3
[2026-04-27 22:05:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 22:05:37]  is_altstaged=None
[2026-04-27 22:05:37]  is_tar=False
[2026-04-27 22:05:37]  lfn=log.49263208._040280.job.log.tgz.1
[2026-04-27 22:05:37]  mtime=0
[2026-04-27 22:05:37]  protocol_id=None
[2026-04-27 22:05:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 22:05:37]  replicas=None
[2026-04-27 22:05:37]  scope=mc23_13p6TeV
[2026-04-27 22:05:37]  status=None
[2026-04-27 22:05:37]  status_code=0
[2026-04-27 22:05:37]  storage_token=
[2026-04-27 22:05:37]  surl=/var/lib/boinc/slots/13/PanDA_Pilot-7104821304/log.49263208._040280.job.log.tgz.1
[2026-04-27 22:05:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/0a/log.49263208._040280.job.log.tgz.1
[2026-04-27 22:05:37]  workdir=None
[2026-04-27 22:05:37] ]
[2026-04-27 22:05:37] 2026-04-27 20:04:32,686 | INFO     | transferring file log.49263208._040280.job.log.tgz.1 from /var/lib/boinc/slots/13/PanDA_Pilot-7104821304/log.49263208._040280.job.log.tgz.1 to /var/lib/boinc/slots
[2026-04-27 22:05:37] 2026-04-27 20:04:32,686 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/13/PanDA_Pilot-7104821304/log.49263208._040280.job.log.tgz.1 /var/lib/boinc/slots/13/log.49263208._040280.j
[2026-04-27 22:05:37] 2026-04-27 20:04:32,701 | INFO     | adding to output.list: log.49263208._040280.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c5/0a/log.49263208._040280.job.log.tg
[2026-04-27 22:05:37] 2026-04-27 20:04:32,702 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 22:05:37] 2026-04-27 20:04:32,702 | INFO     | summary of transferred files:
[2026-04-27 22:05:37] 2026-04-27 20:04:32,702 | INFO     |  -- lfn=log.49263208._040280.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 22:05:37] 2026-04-27 20:04:32,702 | INFO     | stage-out finished correctly
[2026-04-27 22:05:37] 2026-04-27 20:04:33,816 | INFO     | monitor loop #122: job 0:7104821304 is in state 'finished'
[2026-04-27 22:05:37] 2026-04-27 20:04:33,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 22:05:37] 2026-04-27 20:04:34,329 | INFO     | job 7104821304 has state=finished
[2026-04-27 22:05:37] 2026-04-27 20:04:34,329 | INFO     | preparing for final server update for job 7104821304 in state='finished'
[2026-04-27 22:05:37] 2026-04-27 20:04:34,330 | INFO     | reading metadata from: /var/lib/boinc/slots/13/PanDA_Pilot-7104821304/jobReport.json
[2026-04-27 22:05:37] 2026-04-27 20:04:34,331 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/13/workernode_map.json
[2026-04-27 22:05:37] 2026-04-27 20:04:34,331 | INFO     | this job has now completed (state=finished)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,331 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,331 | INFO     | log transfer has been attempted: DONE
[2026-04-27 22:05:37] 2026-04-27 20:04:34,331 | INFO     | job 7104821304 has finished - writing final server update
[2026-04-27 22:05:37] 2026-04-27 20:04:34,332 | INFO     | total number of processed events: 400 (read)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,345 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7104821304/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,345 | INFO     | extracted standard info from prmon json
[2026-04-27 22:05:37] 2026-04-27 20:04:34,345 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 22:05:37] 2026-04-27 20:04:34,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 22:05:37] 2026-04-27 20:04:34,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | fitting pss+swap vs Time
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | sum of square deviations: 2120970.0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | sum of deviations: 72935748.0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | mean x (centered): 0.0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | mean y: 2715857.789473684
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | intersect: 2715857.789473684
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | chi2: 5.04359947503449e-05
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | current memory leak: 34.39 B/s (using 19 data points, chi2=0.00)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | could have reported an average CPU frequency of 3367 MHz (4 samples)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,346 | INFO     | ..............................
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . Timing measurements:
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . get job = 0 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . initial setup = 2 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . payload setup = 3 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . stage-in = 0 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . payload execution = 1544 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . stage-out = 0 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | . log creation = 0 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,347 | INFO     | ..............................
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | 
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | job summary report
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | --------------------------------------------------
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | PanDA job id: 7104821304
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | task id: 49263208
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | errors: (none)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | pilot state: finished 
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | transexitcode: 0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | exeerrorcode: 0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | exeerrordiag: 
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | exitcode: 0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | exitmsg: OK
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | cpuconsumptiontime: 16754 s
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | nevents: 400
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | neventsw: 0
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | pid: 3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | pgrp: 3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | corecount: 12
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | event service: False
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | sizes: {0: 2280710, 1: 2282539, 11: 2282539, 1551: 2307312, 1552: 2307311, 1553: 2316367, 1554: 2316745}
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | --------------------------------------------------
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | 
[2026-04-27 22:05:37] 2026-04-27 20:04:34,393 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | job 7104821304 has completed (purged errors)
[2026-04-27 22:05:37] 2026-04-27 20:04:34,412 | INFO     | overall cleanup function is called
[2026-04-27 22:05:37] 2026-04-27 20:04:35,419 | INFO     | --- collectZombieJob: --- 10, [3805003]
[2026-04-27 22:05:37] 2026-04-27 20:04:35,419 | INFO     | zombie collector waiting for pid 3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:35,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 22:05:37] 2026-04-27 20:04:35,419 | INFO     | collected zombie processes
[2026-04-27 22:05:37] 2026-04-27 20:04:35,419 | INFO     | will attempt to kill all subprocesses of pid=3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:35,590 | INFO     | process IDs to be killed: [3805003] (in reverse order)
[2026-04-27 22:05:37] 2026-04-27 20:04:35,680 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 22:05:37] 2026-04-27 20:04:35,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 22:05:37] 2026-04-27 20:04:35,694 | INFO     | did not find any defunct processes belonging to 3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:35,705 | INFO     | did not find any defunct processes belonging to 3805003
[2026-04-27 22:05:37] 2026-04-27 20:04:35,706 | INFO     | Ready for new job
[2026-04-27 22:05:37] 2026-04-27 20:04:35,707 | INFO     | ***************************************
[2026-04-27 22:05:37] 2026-04-27 20:04:35,707 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 22:05:37] 2026-04-27 20:04:35,707 | INFO     | ***************************************
[2026-04-27 22:05:37] 2026-04-27 20:04:35,707 | INFO     | 
[2026-04-27 22:05:37] 2026-04-27 20:04:35,711 | INFO     | architecture information:
[2026-04-27 22:05:37] 2026-04-27 20:04:35,711 | INFO     | executing command: cat /etc/os-release
[2026-04-27 22:05:37] 2026-04-27 20:04:35,728 | INFO     | cat /etc/os-release:
[2026-04-27 22:05:37] NAME="CentOS Linux"
[2026-04-27 22:05:37] VERSION="7 (Core)"
[2026-04-27 22:05:37] ID="centos"
[2026-04-27 22:05:37] ID_LIKE="rhel fedora"
[2026-04-27 22:05:37] VERSION_ID="7"
[2026-04-27 22:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 22:05:37] ANSI_COLOR="0;31"
[2026-04-27 22:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 22:05:37] HOME_URL="https://www.centos.org/"
[2026-04-27 22:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 22:05:37] 
[2026-04-27 22:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 22:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 22:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 22:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 22:05:37] 
[2026-04-27 22:05:37] 2026-04-27 20:04:35,728 | INFO     | ***************************************
[2026-04-27 22:05:37] 2026-04-27 20:04:36,231 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-04-27 22:05:37] 2026-04-27 20:04:36,249 | INFO     | sufficient remaining disk space (619841585152 B)
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | INFO     | update_server=False
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 22:05:37] 2026-04-27 20:04:36,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:05:37] 2026-04-27 20:04:36,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 22:05:37] 2026-04-27 20:04:36,267 | INFO     | all job control threads have been joined
[2026-04-27 22:05:37] 2026-04-27 20:04:36,319 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 22:05:37] 2026-04-27 20:04:36,319 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 22:05:37] 2026-04-27 20:04:36,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:05:37] 2026-04-27 20:04:36,319 | INFO     | will abort loop
[2026-04-27 22:05:37] 2026-04-27 20:04:36,512 | INFO     | all data control threads have been joined
[2026-04-27 22:05:37] 2026-04-27 20:04:37,045 | INFO     | all payload control threads have been joined
[2026-04-27 22:05:37] 2026-04-27 20:04:37,255 | INFO     | [job] retrieve thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,256 | INFO     | [job] queue monitor thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,273 | INFO     | [job] control thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,325 | INFO     | [job] job monitor thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,487 | INFO     | [payload] validate_post thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,517 | INFO     | [data] control thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,721 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,827 | INFO     | [job] validate thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,904 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:37,947 | INFO     | [payload] failed_post thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:38,018 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:38,046 | INFO     | [data] copytool_in thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:38,051 | INFO     | [payload] control thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:38,257 | INFO     | [data] copytool_out thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:38,645 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:04:40,257 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 22:05:37] 2026-04-27 20:05:06,008 | INFO     | PID=3787656 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 22:05:37] 2026-04-27 20:05:06,008 | INFO     | .. there are 15 such processes running
[2026-04-27 22:05:37] 2026-04-27 20:05:06,009 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 22:05:37] 2026-04-27 20:05:06,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 22:05:37] 2026-04-27 20:05:06,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 22:05:37] 2026-04-27 20:05:31,470 | INFO     | [monitor] cgroup control has ended
[2026-04-27 22:05:37] 2026-04-27 20:05:32,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706224457536)>', '<ExcThread(monitor, started 140705846507264)>']
[2026-04-27 22:05:37] 2026-04-27 20:05:33,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 22:05:37] 2026-04-27 20:05:33,120 | INFO     | [monitor] control thread has ended
[2026-04-27 22:05:37] 2026-04-27 20:05:37,224 | INFO     | all workflow threads have been joined
[2026-04-27 22:05:37] 2026-04-27 20:05:37,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 22:05:37] 2026-04-27 20:05:37,224 | INFO     | traces error code: 0
[2026-04-27 22:05:37] 2026-04-27 20:05:37,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 22:05:37] 2026-04-27 20:05:37,370 [wrapper] ==== pilot stdout END ====
[2026-04-27 22:05:37] 2026-04-27 20:05:37,373 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 22:05:37] 2026-04-27 20:05:37,375 [wrapper] pilotpid: 3787656
[2026-04-27 22:05:37] 2026-04-27 20:05:37,378 [wrapper] Pilot exit status: 0
[2026-04-27 22:05:37] 2026-04-27 20:05:37,387 [wrapper] pandaids: 7104821304
[2026-04-27 22:05:37] 2026-04-27 20:05:37,446 [wrapper] cleanup supervisor_pilot 3927878 3787657
[2026-04-27 22:05:37] 2026-04-27 20:05:37,448 [wrapper] Test setup, not cleaning
[2026-04-27 22:05:37] 2026-04-27 20:05:37,451 [wrapper] apfmon messages muted
[2026-04-27 22:05:37] 2026-04-27 20:05:37,453 [wrapper] ==== wrapper stdout END ====
[2026-04-27 22:05:37] 2026-04-27 20:05:37,455 [wrapper] ==== wrapper stderr END ====
[2026-04-27 22:05:37]  *** Error codes and diagnostics ***
[2026-04-27 22:05:37]     "exeErrorCode": 0,
[2026-04-27 22:05:37]     "pilotErrorCode": 0,
[2026-04-27 22:05:37]  *** Listing of results directory ***
[2026-04-27 22:05:37] total 418856
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc    683926 Apr 27 15:58 pilot3.tar.gz
[2026-04-27 22:05:37] -rwx------. 1 boinc boinc     36322 Apr 27 16:00 runpilot2-wrapper.sh
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc      5631 Apr 27 16:00 queuedata.json
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc       100 Apr 27 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 22:05:37] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 21:38 run_atlas
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc       105 Apr 27 21:38 job.xml
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc 226871828 Apr 27 21:38 EVNT.49263206._000541.pool.root.1
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc     15667 Apr 27 21:38 start_atlas.sh
[2026-04-27 22:05:37] drwxrwx--x. 2 boinc boinc      4096 Apr 27 21:38 shared
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc    697419 Apr 27 21:38 input.tar.gz
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc      6673 Apr 27 21:38 init_data.xml
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc         0 Apr 27 21:38 boinc_lockfile
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc      2575 Apr 27 21:38 pandaJob.out
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc    997821 Apr 27 21:38 agis_schedconf.cvmfs.json
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc   1512704 Apr 27 21:38 agis_ddmendpoints.agis.ALL.json
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc       435 Apr 27 21:38 workernode_map.json
[2026-04-27 22:05:37] drwx------. 5 boinc boinc      4096 Apr 27 21:38 pilot3
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc 196848220 Apr 27 22:04 HITS.49263208._040280.pool.root.1
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc       487 Apr 27 22:04 boinc_task_state.xml
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc      1032 Apr 27 22:04 memory_monitor_summary.json
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc    328224 Apr 27 22:04 log.49263208._040280.job.log.tgz.1
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc      6361 Apr 27 22:04 heartbeat_new.json
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc      6252 Apr 27 22:04 heartbeat.json
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc        95 Apr 27 22:05 pilot_heartbeat.json
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc        27 Apr 27 22:05 wrapper_checkpoint.txt
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc      8192 Apr 27 22:05 boinc_mmap_file
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc      5011 Apr 27 22:05 pilotlog.txt
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc    192916 Apr 27 22:05 log.49263208._040280.job.log.1
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc       357 Apr 27 22:05 output.list
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc       410 Apr 27 22:05 runtime_log
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc    542720 Apr 27 22:05 result.tar.gz
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc      8492 Apr 27 22:05 runtime_log.err
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc       656 Apr 27 22:05 6c13c30422ad.diag
[2026-04-27 22:05:37] -rw-r--r--. 1 boinc boinc     20995 Apr 27 22:05 stderr.txt
[2026-04-27 22:05:37] HITS file was successfully produced:
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc 196848220 Apr 27 22:04 shared/HITS.pool.root.1
[2026-04-27 22:05:37]  *** Contents of shared directory: ***
[2026-04-27 22:05:37] total 415032
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc 226871828 Apr 27 21:38 ATLAS.root_0
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc     15667 Apr 27 21:38 start_atlas.sh
[2026-04-27 22:05:37] -rw-r--r--. 2 boinc boinc    697419 Apr 27 21:38 input.tar.gz
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc 196848220 Apr 27 22:04 HITS.pool.root.1
[2026-04-27 22:05:37] -rw-------. 1 boinc boinc    542720 Apr 27 22:05 result.tar.gz
22:05:39 (3780511): run_atlas exited; CPU time 16775.678256
22:05:39 (3780511): called boinc_finish(0)

</stderr_txt>
]]>

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