Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 14:52:57 (14068): vboxwrapper version 26210
2026-04-28 14:52:57 (14068): BOINC client version: 8.2.9
2026-04-28 14:52:58 (14068): Detected: VirtualBox VboxManage Interface (Version: 7.1.16)
2026-04-28 14:52:58 (14068): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 14:52:58 (14068): Create VM. (boinc_27520e44dbfd3a7e, slot#0)
2026-04-28 14:52:59 (14068): Setting Memory Size for VM. (4600MB)
2026-04-28 14:52:59 (14068): Setting CPU Count for VM. (6)
2026-04-28 14:53:00 (14068): Setting Chipset Options for VM.
2026-04-28 14:53:00 (14068): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 14:53:00 (14068): Setting Boot Options for VM.
2026-04-28 14:53:01 (14068): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 14:53:01 (14068): Enabling VM Network Access.
2026-04-28 14:53:01 (14068): Disabling USB Support for VM.
2026-04-28 14:53:01 (14068): Disabling COM Port Support for VM.
2026-04-28 14:53:02 (14068): Disabling LPT Port Support for VM.
2026-04-28 14:53:02 (14068): Disabling Audio Support for VM.
2026-04-28 14:53:02 (14068): Disabling Clipboard Support for VM.
2026-04-28 14:53:03 (14068): Disabling Drag and Drop Support for VM.
2026-04-28 14:53:03 (14068): Adding storage controller(s) to VM.
2026-04-28 14:53:03 (14068): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 14:53:05 (14068): Adding VirtualBox Guest Additions to VM.
2026-04-28 14:53:05 (14068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 14:53:06 (14068): forwarding host port 58518 to guest port 80
2026-04-28 14:53:06 (14068): Enabling remote desktop for VM.
2026-04-28 14:53:07 (14068): Enabling shared directory for VM.
2026-04-28 14:53:07 (14068): Starting VM using VBoxManage interface. (boinc_27520e44dbfd3a7e, slot#0)
2026-04-28 14:53:13 (14068): Successfully started VM. (PID = '3156')
2026-04-28 14:53:13 (14068): Reporting VM Process ID to BOINC.
2026-04-28 14:53:13 (14068): Guest Log: BIOS: VirtualBox 7.1.16
2026-04-28 14:53:13 (14068): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 14:53:13 (14068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 14:53:13 (14068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 14:53:13 (14068): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 14:53:13 (14068): Detected: Web Application Enabled (http://localhost:58518)
2026-04-28 14:53:13 (14068): Detected: Remote Desktop Enabled (localhost:58519)
2026-04-28 14:53:13 (14068): Preference change detected
2026-04-28 14:53:13 (14068): Setting CPU throttle for VM. (100%)
2026-04-28 14:53:13 (14068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 14:53:15 (14068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 14:53:15 (14068): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 14:53:18 (14068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 14:53:18 (14068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 14:53:18 (14068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 14:53:23 (14068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 14:53:23 (14068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 14:53:28 (14068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000181 main     Log opened 2026-04-28T14:53:27.181916000Z
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000278 main     OS Product: Linux
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000309 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000334 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000359 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000360 main     Process ID: 1343
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.000360 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 14:53:28 (14068): Guest Log: 00:00:00.002632 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 14:53:30 (14068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 14:53:30 (14068): Guest Log: [INFO] Mounting shared directory
2026-04-28 14:53:30 (14068): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 14:53:38 (14068): Guest Log: 00:00:10.030083 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 789 072 595 000ns (GuestNow=1 777 377 218 113 554 000 ns GuestLast=1 777 388 007 186 149 000 ns fSetTimeLastLoop=true )
2026-04-28 14:54:11 (14068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 14:54:11 (14068): Guest Log: [INFO] Detected branch: prod
2026-04-28 14:54:13 (14068): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 14:54:13 (14068): Guest Log: Copying input files
2026-04-28 14:54:14 (14068): Guest Log: Copied input files into RunAtlas.
2026-04-28 14:54:14 (14068): Guest Log: Detected user-configured HTTP proxy at http://192.168.50.128:3128 - will set in /etc/cvmfs/default.local
2026-04-28 14:54:25 (14068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 14:54:25 (14068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 14:54:25 (14068): Guest Log: 2.6.3.0 1649 0 31600 158965 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.50.128:3128 1
2026-04-28 14:54:26 (14068): Guest Log: copied the webapp to /var/www
2026-04-28 14:54:26 (14068): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-28 14:54:26 (14068): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-28 14:54:26 (14068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 14:54:26 (14068): Guest Log:  *** Starting ATLAS job. (PandaID=7116259726 taskID=49912885) ***
2026-04-28 16:36:49 (14068): Status Report: Elapsed Time: '6000.580593'
2026-04-28 16:36:49 (14068): Status Report: CPU Time: '29477.171875'
2026-04-28 16:39:40 (14068): Guest Log:  *** Job finished ***
2026-04-28 16:39:40 (14068): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:06,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:06,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:32,569 | INFO     | [monitor] cgroup control has ended
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:33,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808702510912)>', '<ExcThread(monitor, started 139807762151168)>']
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:33,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:33,973 | INFO     | [monitor] control thread has ended
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:38,901 | INFO     | all workflow threads have been joined
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:38,902 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:38,902 | INFO     | traces error code: 0
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:38,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:38,996 [wrapper] ==== pilot stdout END ====
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,002 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,007 [wrapper] pilotpid: 6067
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,013 [wrapper] Pilot exit status: 0
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,045 [wrapper] pandaids: 7116259726
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,077 [wrapper] cleanup supervisor_pilot 25632 6068
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,083 [wrapper] Test setup, not cleaning
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,089 [wrapper] apfmon messages muted
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,094 [wrapper] ==== wrapper stdout END ====
2026-04-28 16:39:40 (14068): Guest Log: 2026-04-28 13:39:39,099 [wrapper] ==== wrapper stderr END ====
2026-04-28 16:39:40 (14068): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 16:39:40 (14068): Guest Log:     "exeErrorCode": 0,
2026-04-28 16:39:40 (14068): Guest Log:     "pilotErrorCode": 0,
2026-04-28 16:39:40 (14068): Guest Log:  *** Listing of results directory ***
2026-04-28 16:39:40 (14068): Guest Log: total 208516
2026-04-28 16:39:40 (14068): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 27 12:07 queuedata.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 27 12:07 pilot3.tar.gz
2026-04-28 16:39:40 (14068): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 27 12:07 runpilot2-wrapper.sh
2026-04-28 16:39:40 (14068): Guest Log: -rwxr-xr-x. 1 atlas atlas      9386 Apr 28 11:54 init_data.xml
2026-04-28 16:39:40 (14068): Guest Log: -rwxr-xr-x. 1 atlas atlas    697417 Apr 28 11:54 input.tar.gz
2026-04-28 16:39:40 (14068): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 11:54 start_atlas.sh
2026-04-28 16:39:40 (14068): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 11:54 EVNT.49912882._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 16:39:40 (14068): Guest Log: -rw-r--r--. 1 atlas atlas      2610 Apr 28 11:54 pandaJob.out
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas        51 Apr 28 11:54 setup.sh.local
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 11:56 agis_ddmendpoints.agis.ALL.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas       410 Apr 28 11:56 workernode_map.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas    993621 Apr 28 11:56 agis_schedconf.cvmfs.json
2026-04-28 16:39:40 (14068): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 11:56 pilot3
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas 207727446 Apr 28 13:37 HITS.49912885._000209.pool.root.1
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 28 13:38 memory_monitor_summary.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas    279493 Apr 28 13:38 log.49912885._000209.job.log.tgz.1
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas      6329 Apr 28 13:38 heartbeat_new.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas      6220 Apr 28 13:38 heartbeat.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 13:39 pilot_heartbeat.json
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas      4804 Apr 28 13:39 pilotlog.txt
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas    582781 Apr 28 13:39 log.49912885._000209.job.log.1
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 13:39 output.list
2026-04-28 16:39:40 (14068): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 13:39 runtime_log
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas    880640 Apr 28 13:39 result.tar.gz
2026-04-28 16:39:40 (14068): Guest Log: -rw-r--r--. 1 atlas atlas      8849 Apr 28 13:39 runtime_log.err
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas       652 Apr 28 13:39 518402b0a889.diag
2026-04-28 16:39:40 (14068): Guest Log: Looking for outputfile HITS.49912885._000209.pool.root.1
2026-04-28 16:39:40 (14068): Guest Log: HITS file was successfully produced
2026-04-28 16:39:40 (14068): Guest Log: -rw-------. 1 atlas atlas 207727446 Apr 28 13:37 /home/atlas/RunAtlas/HITS.49912885._000209.pool.root.1
2026-04-28 16:39:41 (14068): Guest Log: Successfully finished the ATLAS job!
2026-04-28 16:39:41 (14068): Guest Log: Copying the results back to the shared directory!
2026-04-28 16:39:41 (14068): Guest Log:  *** Contents of shared directory: ***
2026-04-28 16:39:41 (14068): Guest Log: total 484332
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root 286616985 Apr 28 11:52 ATLAS.root_0
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root 207727446 Apr 28 13:39 HITS.pool.root.1
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root      9386 Apr 28 11:52 init_data.xml
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root    697417 Apr 28 04:29 input.tar.gz
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root    880640 Apr 28 13:39 result.tar.gz
2026-04-28 16:39:41 (14068): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 28 04:28 start_atlas.sh
2026-04-28 16:39:41 (14068): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 16:39:41 (14068): VM Completion File Detected.
2026-04-28 16:39:41 (14068): Powering off VM.
2026-04-28 16:39:41 (14068): Successfully stopped VM.
2026-04-28 16:39:41 (14068): Deregistering VM. (boinc_27520e44dbfd3a7e, slot#0)
2026-04-28 16:39:42 (14068): Removing network bandwidth throttle group from VM.
2026-04-28 16:39:42 (14068): Removing VM from VirtualBox.
2026-04-28 16:39:47 (14068): called boinc_finish(0)

</stderr_txt>
]]>

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