Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:21:17 (2642496): wrapper (7.7.26015): starting
22:21:17 (2642496): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 22:21:17] Arguments: --nthreads 12
[2026-04-27 22:21:17] Threads: 12
[2026-04-27 22:21:17] Checking for CVMFS
[2026-04-27 22:21:17] No cvmfs_config command found, will try listing directly
[2026-04-27 22:21:17] CVMFS is ok
[2026-04-27 22:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 22:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 22:21:17] Further information can be found at the LHC@home message board.
[2026-04-27 22:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 22:21:17] Checking for apptainer binary...
[2026-04-27 22:21:17] which: no apptainer in ((null))
[2026-04-27 22:21:17] apptainer is not installed, using version from CVMFS
[2026-04-27 22:21:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 22:21:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/22/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-04-27 22:21:17] apptainer works
[2026-04-27 22:21:17] Set ATHENA_PROC_NUMBER=12
[2026-04-27 22:21:17] Set ATHENA_CORE_NUMBER=12
[2026-04-27 22:21:17] Starting ATLAS job with PandaID=7116284332
[2026-04-27 22:21:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 23:13:10]  *** The last 200 lines of the pilot log: ***
[2026-04-27 23:13:10]  status=None
[2026-04-27 23:13:10]  status_code=0
[2026-04-27 23:13:10]  storage_token=
[2026-04-27 23:13:10]  surl=/var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/log.49820244._022041.job.log.tgz.1
[2026-04-27 23:13:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/95/log.49820244._022041.job.log.tgz.1
[2026-04-27 23:13:10]  workdir=None
[2026-04-27 23:13:10] ]
[2026-04-27 23:13:10] 2026-04-27 21:12:01,068 | INFO     | transferring file log.49820244._022041.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/log.49820244._022041.job.log.tgz.1 to /var/lib/
[2026-04-27 23:13:10] 2026-04-27 21:12:01,068 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/log.49820244._022041.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/22/
[2026-04-27 23:13:10] 2026-04-27 21:12:01,083 | INFO     | adding to output.list: log.49820244._022041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/95/log.49820244._022041.job.log.tg
[2026-04-27 23:13:10] 2026-04-27 21:12:01,084 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 23:13:10] 2026-04-27 21:12:01,084 | INFO     | summary of transferred files:
[2026-04-27 23:13:10] 2026-04-27 21:12:01,084 | INFO     |  -- lfn=log.49820244._022041.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 23:13:10] 2026-04-27 21:12:01,084 | INFO     | stage-out finished correctly
[2026-04-27 23:13:10] 2026-04-27 21:12:01,723 | WARNING  | process 2655381 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 23:13:10] 2026-04-27 21:12:01,724 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,724 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 8762211 B
[2026-04-27 23:13:10] 2026-04-27 21:12:01,725 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16823 B
[2026-04-27 23:13:10] 2026-04-27 21:12:01,725 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/22
[2026-04-27 23:13:10] 2026-04-27 21:12:01,737 | INFO     | sufficient remaining disk space (16865296384 B)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,737 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,738 | INFO     | size of work directory /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332: 9051410 B (within 5033164800 B limit)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,739 | INFO     | pfn file=/var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/HITS.49820244._022041.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,739 | INFO     | total size of present files: 0 B (workdir size: 9051410 B)
[2026-04-27 23:13:10] 2026-04-27 21:12:01,739 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/HITS.49820244._022041.pool.root.1 since it does not exist
[2026-04-27 23:13:10] 2026-04-27 21:12:02,041 | INFO     | number of running child processes to parent process 2655381: 1
[2026-04-27 23:13:10] 2026-04-27 21:12:02,041 | INFO     | maximum number of monitored processes: 6
[2026-04-27 23:13:10] 2026-04-27 21:12:03,810 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 23:13:10] 2026-04-27 21:12:03,895 | INFO     | PID=2649226 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-27 23:13:10] 2026-04-27 21:12:03,895 | INFO     | .. there are 15 such processes running
[2026-04-27 23:13:10] 2026-04-27 21:12:04,544 | INFO     | monitor loop #226: job 0:7116284332 is in state 'finished'
[2026-04-27 23:13:10] 2026-04-27 21:12:04,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,319 | INFO     | job 7116284332 has state=finished
[2026-04-27 23:13:10] 2026-04-27 21:12:05,320 | INFO     | preparing for final server update for job 7116284332 in state='finished'
[2026-04-27 23:13:10] 2026-04-27 21:12:05,320 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/jobReport.json
[2026-04-27 23:13:10] 2026-04-27 21:12:05,322 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/22/workernode_map.json
[2026-04-27 23:13:10] 2026-04-27 21:12:05,322 | INFO     | this job has now completed (state=finished)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,322 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,322 | INFO     | log transfer has been attempted: DONE
[2026-04-27 23:13:10] 2026-04-27 21:12:05,322 | INFO     | job 7116284332 has finished - writing final server update
[2026-04-27 23:13:10] 2026-04-27 21:12:05,324 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1562311/.job.ad'
[2026-04-27 23:13:10] 2026-04-27 21:12:05,324 | INFO     | total number of processed events: 400 (read)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,343 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116284332/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,343 | INFO     | extracted standard info from prmon json
[2026-04-27 23:13:10] 2026-04-27 21:12:05,343 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 23:13:10] 2026-04-27 21:12:05,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 23:13:10] 2026-04-27 21:12:05,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | fitting pss+swap vs Time
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | sum of square deviations: 24640462.0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | sum of deviations: 214083099.0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | mean x (centered): 0.0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | mean y: 2802857.8604651163
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | intersect: 2802857.8604651163
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | chi2: 0.0008605270734567309
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | current memory leak: 8.69 B/s (using 43 data points, chi2=0.00)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,345 | INFO     | could have reported an average CPU frequency of 3631 MHz (5 samples)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | ..............................
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . Timing measurements:
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . get job = 0 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . initial setup = 4 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . payload setup = 5 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . stage-in = 0 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . payload execution = 3010 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . stage-out = 0 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | . log creation = 0 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,346 | INFO     | ..............................
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | 
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | job summary report
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | --------------------------------------------------
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | PanDA job id: 7116284332
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | task id: 49820244
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | errors: (none)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | pilot state: finished 
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | transexitcode: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | exeerrorcode: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | exeerrordiag: 
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | exitcode: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | exitmsg: OK
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | cpuconsumptiontime: 32134 s
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | nevents: 400
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | neventsw: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | pid: 2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:05,401 | INFO     | pgrp: 2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | corecount: 12
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | event service: False
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | sizes: {0: 2282439, 11: 2282439, 3019: 2307873, 3021: 2316895, 3024: 2316979, 3025: 2317205}
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | --------------------------------------------------
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | 
[2026-04-27 23:13:10] 2026-04-27 21:12:05,402 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/22
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | job 7116284332 has completed (purged errors)
[2026-04-27 23:13:10] 2026-04-27 21:12:05,423 | INFO     | overall cleanup function is called
[2026-04-27 23:13:10] 2026-04-27 21:12:06,432 | INFO     | --- collectZombieJob: --- 10, [2655381]
[2026-04-27 23:13:10] 2026-04-27 21:12:06,433 | INFO     | zombie collector waiting for pid 2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:06,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 23:13:10] 2026-04-27 21:12:06,433 | INFO     | collected zombie processes
[2026-04-27 23:13:10] 2026-04-27 21:12:06,433 | INFO     | will attempt to kill all subprocesses of pid=2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:06,748 | INFO     | process IDs to be killed: [2655381] (in reverse order)
[2026-04-27 23:13:10] 2026-04-27 21:12:06,913 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 23:13:10] 2026-04-27 21:12:06,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 23:13:10] 2026-04-27 21:12:06,941 | INFO     | did not find any defunct processes belonging to 2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:06,966 | INFO     | did not find any defunct processes belonging to 2655381
[2026-04-27 23:13:10] 2026-04-27 21:12:06,966 | INFO     | Ready for new job
[2026-04-27 23:13:10] 2026-04-27 21:12:06,967 | INFO     | ***************************************
[2026-04-27 23:13:10] 2026-04-27 21:12:06,967 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 23:13:10] 2026-04-27 21:12:06,968 | INFO     | ***************************************
[2026-04-27 23:13:10] 2026-04-27 21:12:06,968 | INFO     | 
[2026-04-27 23:13:10] 2026-04-27 21:12:06,973 | INFO     | architecture information:
[2026-04-27 23:13:10] 2026-04-27 21:12:06,973 | INFO     | executing command: cat /etc/os-release
[2026-04-27 23:13:10] 2026-04-27 21:12:06,986 | INFO     | cat /etc/os-release:
[2026-04-27 23:13:10] NAME="CentOS Linux"
[2026-04-27 23:13:10] VERSION="7 (Core)"
[2026-04-27 23:13:10] ID="centos"
[2026-04-27 23:13:10] ID_LIKE="rhel fedora"
[2026-04-27 23:13:10] VERSION_ID="7"
[2026-04-27 23:13:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 23:13:10] ANSI_COLOR="0;31"
[2026-04-27 23:13:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 23:13:10] HOME_URL="https://www.centos.org/"
[2026-04-27 23:13:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 23:13:10] 
[2026-04-27 23:13:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 23:13:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 23:13:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 23:13:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 23:13:10] 
[2026-04-27 23:13:10] 2026-04-27 21:12:06,986 | INFO     | ***************************************
[2026-04-27 23:13:10] 2026-04-27 21:12:07,489 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/22
[2026-04-27 23:13:10] 2026-04-27 21:12:07,502 | INFO     | sufficient remaining disk space (16864247808 B)
[2026-04-27 23:13:10] 2026-04-27 21:12:07,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 23:13:10] 2026-04-27 21:12:07,503 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 23:13:10] 2026-04-27 21:12:07,503 | INFO     | update_server=False
[2026-04-27 23:13:10] 2026-04-27 21:12:07,503 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 23:13:10] 2026-04-27 21:12:07,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 23:13:10] 2026-04-27 21:12:07,563 | INFO     | all job control threads have been joined
[2026-04-27 23:13:10] 2026-04-27 21:12:07,665 | INFO     | all payload control threads have been joined
[2026-04-27 23:13:10] 2026-04-27 21:12:08,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:13:10] 2026-04-27 21:12:08,048 | INFO     | aborting loop
[2026-04-27 23:13:10] 2026-04-27 21:12:08,438 | INFO     | all data control threads have been joined
[2026-04-27 23:13:10] 2026-04-27 21:12:08,508 | INFO     | [job] retrieve thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:08,568 | INFO     | [job] control thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:08,628 | INFO     | [payload] validate_post thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:08,670 | INFO     | [payload] control thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:08,994 | INFO     | [payload] failed_post thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,054 | INFO     | [job] job monitor thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,131 | INFO     | [job] validate thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,297 | INFO     | [data] copytool_in thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,372 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,443 | INFO     | [data] control thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,508 | INFO     | [data] copytool_out thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,512 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,572 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:09,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 23:13:10] 2026-04-27 21:12:10,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:13:10] 2026-04-27 21:12:11,415 | INFO     | [job] queue monitor thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:13,872 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 23:13:10] 2026-04-27 21:12:33,754 | INFO     | [monitor] cgroup control has ended
[2026-04-27 23:13:10] 2026-04-27 21:12:34,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22732551890752)>', '<ExcThread(monitor, started 22732251059968)>']
[2026-04-27 23:13:10] 2026-04-27 21:12:38,465 | INFO     | PID=2649226 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 23:13:10] 2026-04-27 21:12:38,465 | INFO     | .. there are 15 such processes running
[2026-04-27 23:13:10] 2026-04-27 21:12:38,466 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 23:13:10] 2026-04-27 21:12:38,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 23:13:10] 2026-04-27 21:12:38,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 23:13:10] 2026-04-27 21:12:38,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 23:13:10] 2026-04-27 21:12:38,467 | INFO     | [monitor] control thread has ended
[2026-04-27 23:13:10] 2026-04-27 21:12:39,304 | INFO     | all workflow threads have been joined
[2026-04-27 23:13:10] 2026-04-27 21:12:39,304 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 23:13:10] 2026-04-27 21:12:39,304 | INFO     | traces error code: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:39,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 23:13:10] 2026-04-27 21:12:39,431 [wrapper] ==== pilot stdout END ====
[2026-04-27 23:13:10] 2026-04-27 21:12:39,433 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 23:13:10] 2026-04-27 21:12:39,435 [wrapper] pilotpid: 2649226
[2026-04-27 23:13:10] 2026-04-27 21:12:39,437 [wrapper] Pilot exit status: 0
[2026-04-27 23:13:10] 2026-04-27 21:12:39,444 [wrapper] pandaids: 7116284332
[2026-04-27 23:13:10] 2026-04-27 21:12:39,552 [wrapper] cleanup supervisor_pilot 2932868 2649227
[2026-04-27 23:13:10] 2026-04-27 21:12:39,555 [wrapper] Test setup, not cleaning
[2026-04-27 23:13:10] 2026-04-27 21:12:39,557 [wrapper] apfmon messages muted
[2026-04-27 23:13:10] 2026-04-27 21:12:39,559 [wrapper] ==== wrapper stdout END ====
[2026-04-27 23:13:10] 2026-04-27 21:12:39,561 [wrapper] ==== wrapper stderr END ====
[2026-04-27 23:13:10]  *** Error codes and diagnostics ***
[2026-04-27 23:13:10]     "exeErrorCode": 0,
[2026-04-27 23:13:10]     "pilotErrorCode": 0,
[2026-04-27 23:13:10]  *** Listing of results directory ***
[2026-04-27 23:13:10] total 2439844
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc     683926 Apr 27 18:28 pilot3.tar.gz
[2026-04-27 23:13:10] -rwx------. 1 boinc boinc      36322 Apr 27 18:31 runpilot2-wrapper.sh
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc       5631 Apr 27 18:32 queuedata.json
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc        100 Apr 27 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 23:13:10] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 22:05 run_atlas
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc        105 Apr 27 22:05 job.xml
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc       6628 Apr 27 22:21 init_data.xml
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc 2219180719 Apr 27 22:21 EVNT.49820242._000054.pool.root.1
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc      15667 Apr 27 22:21 start_atlas.sh
[2026-04-27 23:13:10] drwxrwx--x. 2 boinc boinc       4096 Apr 27 22:21 shared
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc     697411 Apr 27 22:21 input.tar.gz
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc          0 Apr 27 22:21 boinc_lockfile
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc       2549 Apr 27 22:21 pandaJob.out
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc     997821 Apr 27 22:21 agis_schedconf.cvmfs.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc    1512704 Apr 27 22:21 agis_ddmendpoints.agis.ALL.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc        444 Apr 27 22:21 workernode_map.json
[2026-04-27 23:13:10] drwx------. 5 boinc boinc       4096 Apr 27 22:21 pilot3
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc  273476235 Apr 27 23:11 HITS.49820244._022041.pool.root.1
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc        487 Apr 27 23:11 boinc_task_state.xml
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc       1026 Apr 27 23:11 memory_monitor_summary.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc     476225 Apr 27 23:12 log.49820244._022041.job.log.tgz.1
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc       6369 Apr 27 23:12 heartbeat_new.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc       6260 Apr 27 23:12 heartbeat.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc         95 Apr 27 23:12 pilot_heartbeat.json
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc       4833 Apr 27 23:12 pilotlog.txt
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc     326646 Apr 27 23:12 log.49820244._022041.job.log.1
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc        357 Apr 27 23:12 output.list
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc        410 Apr 27 23:12 runtime_log
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc     819200 Apr 27 23:12 result.tar.gz
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc       8846 Apr 27 23:12 runtime_log.err
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc        660 Apr 27 23:12 8f716875d531.diag
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc         26 Apr 27 23:13 wrapper_checkpoint.txt
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc       8192 Apr 27 23:13 boinc_mmap_file
[2026-04-27 23:13:10] -rw-r--r--. 1 boinc boinc      22257 Apr 27 23:13 stderr.txt
[2026-04-27 23:13:10] HITS file was successfully produced:
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc 273476235 Apr 27 23:11 shared/HITS.pool.root.1
[2026-04-27 23:13:10]  *** Contents of shared directory: ***
[2026-04-27 23:13:10] total 2435748
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc 2219180719 Apr 27 22:21 ATLAS.root_0
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc      15667 Apr 27 22:21 start_atlas.sh
[2026-04-27 23:13:10] -rw-r--r--. 2 boinc boinc     697411 Apr 27 22:21 input.tar.gz
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc  273476235 Apr 27 23:11 HITS.pool.root.1
[2026-04-27 23:13:10] -rw-------. 1 boinc boinc     819200 Apr 27 23:12 result.tar.gz
23:13:11 (2642496): run_atlas exited; CPU time 32223.326232
23:13:11 (2642496): called boinc_finish(0)

</stderr_txt>
]]>

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