Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
16:39:10 (1118316): wrapper (7.7.26015): starting
16:39:10 (1118316): wrapper: running run_atlas (--nthreads 4)
[2026-04-29 16:39:10] Arguments: --nthreads 4
[2026-04-29 16:39:10] Threads: 4
[2026-04-29 16:39:10] Checking for CVMFS
[2026-04-29 16:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-29 16:39:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-29 16:39:12] Running cvmfs_config stat atlas.cern.ch
[2026-04-29 16:39:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-29 16:39:12] 2.13.3.0 9686 4151 61260 159009 2 50 2871106 4096000 916 130560 0 2538276 99.987 153833 1417 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
[2026-04-29 16:39:12] CVMFS is ok
[2026-04-29 16:39:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 16:39:12] Checking for apptainer binary...
[2026-04-29 16:39:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-29 16:39:12] Running /usr/bin/apptainer --version
[2026-04-29 16:39:12] apptainer version 1.4.5
[2026-04-29 16:39:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 16:39:12] TC-M800
[2026-04-29 16:39:12] apptainer works
[2026-04-29 16:39:12] Set ATHENA_PROC_NUMBER=4
[2026-04-29 16:39:12] Set ATHENA_CORE_NUMBER=4
[2026-04-29 16:39:12] Starting ATLAS job with PandaID=7116259124
[2026-04-29 16:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 19:09:43]  *** The last 200 lines of the pilot log: ***
[2026-04-29 19:09:43] 2026-04-29 17:08:45,616 | INFO     |  -- lfn=log.49912885._000121.job.log.tgz.1, status_code=0, status=transferred
[2026-04-29 19:09:43] 2026-04-29 17:08:45,616 | INFO     | stage-out finished correctly
[2026-04-29 19:09:43] 2026-04-29 17:08:45,679 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-29 19:09:43] 2026-04-29 17:08:45,985 | INFO     | job 7116259124 has state=finished
[2026-04-29 19:09:43] 2026-04-29 17:08:45,986 | INFO     | preparing for final server update for job 7116259124 in state='finished'
[2026-04-29 19:09:43] 2026-04-29 17:08:45,986 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7116259124/jobReport.json
[2026-04-29 19:09:43] 2026-04-29 17:08:45,987 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-04-29 19:09:43] 2026-04-29 17:08:45,988 | INFO     | this job has now completed (state=finished)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,988 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,988 | INFO     | log transfer has been attempted: DONE
[2026-04-29 19:09:43] 2026-04-29 17:08:45,988 | INFO     | job 7116259124 has finished - writing final server update
[2026-04-29 19:09:43] 2026-04-29 17:08:45,988 | INFO     | total number of processed events: 400 (read)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,990 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7116259124/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,990 | INFO     | extracted standard info from prmon json
[2026-04-29 19:09:43] 2026-04-29 17:08:45,990 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 19:09:43] 2026-04-29 17:08:45,990 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 19:09:43] 2026-04-29 17:08:45,990 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 19:09:43] 2026-04-29 17:08:45,992 | INFO     | fitting pss+swap vs Time
[2026-04-29 19:09:43] 2026-04-29 17:08:45,992 | INFO     | sum of square deviations: 984941258.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,993 | INFO     | sum of deviations: -17011696775.000006
[2026-04-29 19:09:43] 2026-04-29 17:08:45,993 | INFO     | mean x (centered): 0.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,993 | INFO     | mean y: 2426216.1088435375
[2026-04-29 19:09:43] 2026-04-29 17:08:45,993 | INFO     | intersect: 2426216.1088435375
[2026-04-29 19:09:43] 2026-04-29 17:08:45,993 | INFO     | chi2: 1.249015799980548
[2026-04-29 19:09:43] 2026-04-29 17:08:45,994 | INFO     | sum of square deviations: 887813855.5
[2026-04-29 19:09:43] 2026-04-29 17:08:45,994 | INFO     | sum of deviations: -16182045077.499998
[2026-04-29 19:09:43] 2026-04-29 17:08:45,994 | INFO     | mean x (centered): 0.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,994 | INFO     | mean y: 2427519.2464788733
[2026-04-29 19:09:43] 2026-04-29 17:08:45,994 | INFO     | intersect: 2427519.2464788733
[2026-04-29 19:09:43] 2026-04-29 17:08:45,995 | INFO     | chi2: 1.2449833462894846
[2026-04-29 19:09:43] 2026-04-29 17:08:45,995 | INFO     | current chi2=1.2449833462894846 (change=0.32285049485572725 %)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,995 | INFO     | right removable region: 141
[2026-04-29 19:09:43] 2026-04-29 17:08:45,995 | INFO     | sum of square deviations: 887813855.5
[2026-04-29 19:09:43] 2026-04-29 17:08:45,995 | INFO     | sum of deviations: -29488467072.999996
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | mean x (centered): 0.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | mean y: 2445254.2535211267
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | intersect: 2445254.2535211267
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | chi2: 0.1383728736700416
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | current chi2=0.1383728736700416 (change=88.92144729696801 %)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,996 | INFO     | sum of square deviations: 797291228.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | sum of deviations: -23043122100.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | mean x (centered): 0.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | mean y: 2434377.890510949
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | intersect: 2434377.890510949
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | chi2: 0.11560054850616407
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | current chi2=0.11560054850616407 (change=16.457217776787317 %)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | left removable region: 10
[2026-04-29 19:09:43] 2026-04-29 17:08:45,997 | INFO     | sum of square deviations: 697054930.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | sum of deviations: -21910642704.00003
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | mean x (centered): 0.0
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | mean y: 2436446.7862595418
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | intersect: 2436446.7862595418
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | chi2: 0.10969850567190056
[2026-04-29 19:09:43] 2026-04-29 17:08:45,998 | INFO     | current memory leak: -31.43 B/s (using 131 data points, chi2=0.11)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | ..............................
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . Timing measurements:
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . get job = 0 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . initial setup = 3 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . payload setup = 5 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . stage-in = 0 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . payload execution = 8940 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . stage-out = 0 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | . log creation = 0 s
[2026-04-29 19:09:43] 2026-04-29 17:08:45,999 | INFO     | ..............................
[2026-04-29 19:09:43] 2026-04-29 17:08:46,060 | INFO     | 
[2026-04-29 19:09:43] 2026-04-29 17:08:46,060 | INFO     | job summary report
[2026-04-29 19:09:43] 2026-04-29 17:08:46,060 | INFO     | --------------------------------------------------
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | PanDA job id: 7116259124
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | task id: 49912885
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | errors: (none)
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | pilot state: finished 
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | transexitcode: 0
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | exeerrorcode: 0
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | exeerrordiag: 
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | exitcode: 0
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | exitmsg: OK
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | cpuconsumptiontime: 34393 s
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | nevents: 400
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | neventsw: 0
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | pid: 1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | pgrp: 1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:46,061 | INFO     | corecount: 4
[2026-04-29 19:09:43] 2026-04-29 17:08:46,062 | INFO     | event service: False
[2026-04-29 19:09:43] 2026-04-29 17:08:46,062 | INFO     | sizes: {0: 2280100, 1: 2282586, 12: 2282586, 8949: 2310907, 8950: 2319961, 8951: 2320099}
[2026-04-29 19:09:43] 2026-04-29 17:08:46,062 | INFO     | --------------------------------------------------
[2026-04-29 19:09:43] 2026-04-29 17:08:46,062 | INFO     | 
[2026-04-29 19:09:43] 2026-04-29 17:08:46,062 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-04-29 19:09:43] 2026-04-29 17:08:46,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 19:09:43] 2026-04-29 17:08:46,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 19:09:43] 2026-04-29 17:08:46,076 | INFO     | job 7116259124 has completed (purged errors)
[2026-04-29 19:09:43] 2026-04-29 17:08:46,076 | INFO     | overall cleanup function is called
[2026-04-29 19:09:43] 2026-04-29 17:08:47,082 | INFO     | --- collectZombieJob: --- 10, [1126800]
[2026-04-29 19:09:43] 2026-04-29 17:08:47,082 | INFO     | zombie collector waiting for pid 1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:47,082 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 19:09:43] 2026-04-29 17:08:47,082 | INFO     | collected zombie processes
[2026-04-29 19:09:43] 2026-04-29 17:08:47,082 | INFO     | will attempt to kill all subprocesses of pid=1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:47,138 | INFO     | process IDs to be killed: [1126800] (in reverse order)
[2026-04-29 19:09:43] 2026-04-29 17:08:47,167 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 19:09:43] 2026-04-29 17:08:47,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 19:09:43] 2026-04-29 17:08:47,169 | INFO     | did not find any defunct processes belonging to 1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:47,171 | INFO     | did not find any defunct processes belonging to 1126800
[2026-04-29 19:09:43] 2026-04-29 17:08:47,171 | INFO     | Ready for new job
[2026-04-29 19:09:43] 2026-04-29 17:08:47,172 | INFO     | ***************************************
[2026-04-29 19:09:43] 2026-04-29 17:08:47,172 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 19:09:43] 2026-04-29 17:08:47,172 | INFO     | ***************************************
[2026-04-29 19:09:43] 2026-04-29 17:08:47,172 | INFO     | 
[2026-04-29 19:09:43] 2026-04-29 17:08:47,173 | INFO     | architecture information:
[2026-04-29 19:09:43] 2026-04-29 17:08:47,173 | INFO     | executing command: cat /etc/os-release
[2026-04-29 19:09:43] 2026-04-29 17:08:47,181 | INFO     | cat /etc/os-release:
[2026-04-29 19:09:43] NAME="CentOS Linux"
[2026-04-29 19:09:43] VERSION="7 (Core)"
[2026-04-29 19:09:43] ID="centos"
[2026-04-29 19:09:43] ID_LIKE="rhel fedora"
[2026-04-29 19:09:43] VERSION_ID="7"
[2026-04-29 19:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 19:09:43] ANSI_COLOR="0;31"
[2026-04-29 19:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 19:09:43] HOME_URL="https://www.centos.org/"
[2026-04-29 19:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 19:09:43] 
[2026-04-29 19:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 19:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 19:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 19:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 19:09:43] 
[2026-04-29 19:09:43] 2026-04-29 17:08:47,181 | INFO     | ***************************************
[2026-04-29 19:09:43] 2026-04-29 17:08:47,684 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-04-29 19:09:43] 2026-04-29 17:08:47,693 | INFO     | sufficient remaining disk space (64501055488 B)
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | INFO     | update_server=False
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 19:09:43] 2026-04-29 17:08:47,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 19:09:43] 2026-04-29 17:08:47,980 | INFO     | all job control threads have been joined
[2026-04-29 19:09:43] 2026-04-29 17:08:48,113 | INFO     | all data control threads have been joined
[2026-04-29 19:09:43] 2026-04-29 17:08:48,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 19:09:43] 2026-04-29 17:08:48,283 | INFO     | aborting loop
[2026-04-29 19:09:43] 2026-04-29 17:08:48,469 | INFO     | all payload control threads have been joined
[2026-04-29 19:09:43] 2026-04-29 17:08:48,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 19:09:43] 2026-04-29 17:08:48,699 | INFO     | [job] queue monitor thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:48,699 | INFO     | [job] retrieve thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:48,867 | INFO     | [payload] failed_post thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:48,984 | INFO     | [job] control thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,119 | INFO     | [data] control thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,288 | INFO     | [job] job monitor thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,406 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,474 | INFO     | [payload] control thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,659 | INFO     | [job] validate thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,771 | INFO     | [payload] validate_post thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,842 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:49,929 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:50,130 | INFO     | [data] copytool_in thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:50,170 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:50,688 | INFO     | [data] copytool_out thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:08:51,700 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 19:09:43] 2026-04-29 17:09:18,500 | INFO     | PID=1122384 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-29 19:09:43] 2026-04-29 17:09:18,500 | INFO     | .. there are 2 such processes running
[2026-04-29 19:09:43] 2026-04-29 17:09:18,500 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 19:09:43] 2026-04-29 17:09:18,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 19:09:43] 2026-04-29 17:09:18,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 19:09:43] 2026-04-29 17:09:19,846 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-04-29 19:09:43] 2026-04-29 17:09:38,111 | INFO     | [monitor] cgroup control has ended
[2026-04-29 19:09:43] 2026-04-29 17:09:38,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841661003584)>', '<ExcThread(monitor, started 139841157187328)>']
[2026-04-29 19:09:43] 2026-04-29 17:09:39,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 19:09:43] 2026-04-29 17:09:39,572 | INFO     | [monitor] control thread has ended
[2026-04-29 19:09:43] 2026-04-29 17:09:43,652 | INFO     | all workflow threads have been joined
[2026-04-29 19:09:43] 2026-04-29 17:09:43,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 19:09:43] 2026-04-29 17:09:43,652 | INFO     | traces error code: 0
[2026-04-29 19:09:43] 2026-04-29 17:09:43,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 19:09:43] 2026-04-29 17:09:43,725 [wrapper] ==== pilot stdout END ====
[2026-04-29 19:09:43] 2026-04-29 17:09:43,727 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 19:09:43] 2026-04-29 17:09:43,729 [wrapper] pilotpid: 1122384
[2026-04-29 19:09:43] 2026-04-29 17:09:43,731 [wrapper] Pilot exit status: 0
[2026-04-29 19:09:43] 2026-04-29 17:09:43,736 [wrapper] pandaids: 7116259124
[2026-04-29 19:09:43] 2026-04-29 17:09:43,755 [wrapper] cleanup supervisor_pilot 1145400 1122385
[2026-04-29 19:09:43] 2026-04-29 17:09:43,757 [wrapper] Test setup, not cleaning
[2026-04-29 19:09:43] 2026-04-29 17:09:43,759 [wrapper] apfmon messages muted
[2026-04-29 19:09:43] 2026-04-29 17:09:43,760 [wrapper] ==== wrapper stdout END ====
[2026-04-29 19:09:43] 2026-04-29 17:09:43,762 [wrapper] ==== wrapper stderr END ====
[2026-04-29 19:09:43]  *** Error codes and diagnostics ***
[2026-04-29 19:09:43]     "exeErrorCode": 0,
[2026-04-29 19:09:43]     "pilotErrorCode": 0,
[2026-04-29 19:09:43]  *** Listing of results directory ***
[2026-04-29 19:09:43] insgesamt 498332
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc      5631 27. Apr 14:07 queuedata.json
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc    683926 27. Apr 14:07 pilot3.tar.gz
[2026-04-29 19:09:43] -rwx------ 1 boinc boinc     36322 27. Apr 14:07 runpilot2-wrapper.sh
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc       100 29. Apr 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 19:09:43] -rwxr-xr-x 1 boinc boinc      7986 29. Apr 16:39 run_atlas
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc       105 29. Apr 16:39 job.xml
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc 293682158 29. Apr 16:39 EVNT.49912882._000007.pool.root.1
[2026-04-29 19:09:43] drwxrwx--x 2 boinc boinc      4096 29. Apr 16:39 shared
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc    697416 29. Apr 16:39 input.tar.gz
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc     15667 29. Apr 16:39 start_atlas.sh
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc         0 29. Apr 16:39 boinc_setup_complete
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc      6689 29. Apr 16:39 init_data.xml
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc         0 29. Apr 16:39 boinc_lockfile
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc      2611 29. Apr 16:39 pandaJob.out
[2026-04-29 19:09:43] -rw------- 1 boinc boinc        52 29. Apr 16:39 setup.sh.local
[2026-04-29 19:09:43] -rw------- 1 boinc boinc   1001883 29. Apr 16:39 agis_schedconf.cvmfs.json
[2026-04-29 19:09:43] -rw------- 1 boinc boinc   1512704 29. Apr 16:39 agis_ddmendpoints.agis.ALL.json
[2026-04-29 19:09:43] -rw------- 1 boinc boinc       415 29. Apr 16:39 workernode_map.json
[2026-04-29 19:09:43] drwx------ 5 boinc boinc      4096 29. Apr 16:39 pilot3
[2026-04-29 19:09:43] -rw------- 1 boinc boinc 210147198 29. Apr 19:08 HITS.49912885._000121.pool.root.1
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc       487 29. Apr 19:08 boinc_task_state.xml
[2026-04-29 19:09:43] -rw------- 1 boinc boinc      1015 29. Apr 19:08 memory_monitor_summary.json
[2026-04-29 19:09:43] -rw------- 1 boinc boinc    293167 29. Apr 19:08 log.49912885._000121.job.log.tgz.1
[2026-04-29 19:09:43] -rw------- 1 boinc boinc      6305 29. Apr 19:08 heartbeat_new.json
[2026-04-29 19:09:43] -rw------- 1 boinc boinc      6196 29. Apr 19:08 heartbeat.json
[2026-04-29 19:09:43] -rw------- 1 boinc boinc        95 29. Apr 19:08 pilot_heartbeat.json
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc        27 29. Apr 19:09 wrapper_checkpoint.txt
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc      8192 29. Apr 19:09 boinc_mmap_file
[2026-04-29 19:09:43] -rw------- 1 boinc boinc      4822 29. Apr 19:09 pilotlog.txt
[2026-04-29 19:09:43] -rw------- 1 boinc boinc    864276 29. Apr 19:09 log.49912885._000121.job.log.1
[2026-04-29 19:09:43] -rw------- 1 boinc boinc       357 29. Apr 19:09 output.list
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc       410 29. Apr 19:09 runtime_log
[2026-04-29 19:09:43] -rw------- 1 boinc boinc   1177600 29. Apr 19:09 result.tar.gz
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc      8896 29. Apr 19:09 runtime_log.err
[2026-04-29 19:09:43] -rw------- 1 boinc boinc       643 29. Apr 19:09 51836abe16f4.diag
[2026-04-29 19:09:43] -rw-r--r-- 1 boinc boinc     20840 29. Apr 19:09 stderr.txt
[2026-04-29 19:09:43] HITS file was successfully produced:
[2026-04-29 19:09:43] -rw------- 1 boinc boinc 210147198 29. Apr 19:08 shared/HITS.pool.root.1
[2026-04-29 19:09:43]  *** Contents of shared directory: ***
[2026-04-29 19:09:43] insgesamt 493880
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc 293682158 29. Apr 16:39 ATLAS.root_0
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc    697416 29. Apr 16:39 input.tar.gz
[2026-04-29 19:09:43] -rw-r--r-- 2 boinc boinc     15667 29. Apr 16:39 start_atlas.sh
[2026-04-29 19:09:43] -rw------- 1 boinc boinc 210147198 29. Apr 19:08 HITS.pool.root.1
[2026-04-29 19:09:43] -rw------- 1 boinc boinc   1177600 29. Apr 19:09 result.tar.gz
19:09:45 (1118316): run_atlas exited; CPU time 34473.529641
19:09:45 (1118316): called boinc_finish(0)

</stderr_txt>
]]>

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