Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:07 (20624): wrapper (7.7.26015): starting
08:30:07 (20624): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 08:30:07] Arguments: --nthreads 8
[2026-04-28 08:30:07] Threads: 8
[2026-04-28 08:30:07] Checking for CVMFS
[2026-04-28 08:30:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 08:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 08:30:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 08:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 08:30:14] 2.11.2.0 32409 18077 101676 158957 2 54 17596636 25165825 96 130560 0 5743088 99.931 4845731 9760 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 08:30:14] CVMFS is ok
[2026-04-28 08:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 08:30:14] Checking for apptainer binary...
[2026-04-28 08:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 08:30:14] Running /usr/bin/apptainer --version
[2026-04-28 08:30:15] apptainer version 1.3.2-1.el7
[2026-04-28 08:30:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 08:30:33] cg-vwn411.simple-grid.lan
[2026-04-28 08:30:33] apptainer works
[2026-04-28 08:30:33] Set ATHENA_PROC_NUMBER=8
[2026-04-28 08:30:33] Set ATHENA_CORE_NUMBER=8
[2026-04-28 08:30:33] Starting ATLAS job with PandaID=7116270975
[2026-04-28 08:30:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 14:48:53]  *** The last 200 lines of the pilot log: ***
[2026-04-28 14:48:53] 2026-04-28 12:47:52,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 14:48:53] 2026-04-28 12:47:52,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 14:48:53] 2026-04-28 12:47:52,085 | INFO     | fitting pss+swap vs Time
[2026-04-28 14:48:53] 2026-04-28 12:47:52,086 | INFO     | sum of square deviations: 13990234405.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,090 | INFO     | sum of deviations: 256237634682.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,090 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,091 | INFO     | mean y: 2455294.258426966
[2026-04-28 14:48:53] 2026-04-28 12:47:52,091 | INFO     | intersect: 2455294.258426966
[2026-04-28 14:48:53] 2026-04-28 12:47:52,091 | INFO     | chi2: 10.314861379805246
[2026-04-28 14:48:53] 2026-04-28 12:47:52,092 | INFO     | sum of square deviations: 13408995600.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,103 | INFO     | sum of deviations: 276164074022.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,104 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,104 | INFO     | mean y: 2460451.0056980057
[2026-04-28 14:48:53] 2026-04-28 12:47:52,104 | INFO     | intersect: 2460451.0056980057
[2026-04-28 14:48:53] 2026-04-28 12:47:52,104 | INFO     | chi2: 9.609417513116734
[2026-04-28 14:48:53] 2026-04-28 12:47:52,105 | INFO     | current chi2=9.609417513116734 (change=6.839101765047969 %)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,105 | INFO     | right removable region: 350
[2026-04-28 14:48:53] 2026-04-28 12:47:52,105 | INFO     | sum of square deviations: 13408995600.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,109 | INFO     | sum of deviations: 123925481714.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,110 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,110 | INFO     | mean y: 2490009.9344729343
[2026-04-28 14:48:53] 2026-04-28 12:47:52,110 | INFO     | intersect: 2490009.9344729343
[2026-04-28 14:48:53] 2026-04-28 12:47:52,110 | INFO     | chi2: 4.772941342435221
[2026-04-28 14:48:53] 2026-04-28 12:47:52,111 | INFO     | current chi2=4.772941342435221 (change=53.727528013320345 %)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,111 | INFO     | sum of square deviations: 12844082682.5
[2026-04-28 14:48:53] 2026-04-28 12:47:52,115 | INFO     | sum of deviations: 19623328449.000008
[2026-04-28 14:48:53] 2026-04-28 12:47:52,115 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,116 | INFO     | mean y: 2518151.8150289017
[2026-04-28 14:48:53] 2026-04-28 12:47:52,116 | INFO     | intersect: 2518151.8150289017
[2026-04-28 14:48:53] 2026-04-28 12:47:52,116 | INFO     | chi2: 1.5622696036865051
[2026-04-28 14:48:53] 2026-04-28 12:47:52,117 | INFO     | current chi2=1.5622696036865051 (change=67.26820022285433 %)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,117 | INFO     | sum of square deviations: 12295263090.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,121 | INFO     | sum of deviations: -21468516290.000004
[2026-04-28 14:48:53] 2026-04-28 12:47:52,121 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,121 | INFO     | mean y: 2529507.879765396
[2026-04-28 14:48:53] 2026-04-28 12:47:52,121 | INFO     | intersect: 2529507.879765396
[2026-04-28 14:48:53] 2026-04-28 12:47:52,122 | INFO     | chi2: 0.8533432900556605
[2026-04-28 14:48:53] 2026-04-28 12:47:52,129 | INFO     | current chi2=0.8533432900556605 (change=45.37797522002497 %)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,130 | INFO     | sum of square deviations: 11762304260.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,134 | INFO     | sum of deviations: -21290151619.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,134 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,134 | INFO     | mean y: 2529441.6726190476
[2026-04-28 14:48:53] 2026-04-28 12:47:52,134 | INFO     | intersect: 2529441.6726190476
[2026-04-28 14:48:53] 2026-04-28 12:47:52,135 | INFO     | chi2: 0.8382713265256777
[2026-04-28 14:48:53] 2026-04-28 12:47:52,135 | INFO     | current chi2=0.8382713265256777 (change=1.7662251177951676 %)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,135 | INFO     | left removable region: 20
[2026-04-28 14:48:53] 2026-04-28 12:47:52,136 | INFO     | sum of square deviations: 11143362422.5
[2026-04-28 14:48:53] 2026-04-28 12:47:52,139 | INFO     | sum of deviations: 1278701276.0000038
[2026-04-28 14:48:53] 2026-04-28 12:47:52,140 | INFO     | mean x (centered): 0.0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,140 | INFO     | mean y: 2536014.212121212
[2026-04-28 14:48:53] 2026-04-28 12:47:52,140 | INFO     | intersect: 2536014.212121212
[2026-04-28 14:48:53] 2026-04-28 12:47:52,140 | INFO     | chi2: 0.05518958387414962
[2026-04-28 14:48:53] 2026-04-28 12:47:52,141 | INFO     | current memory leak: 0.11 B/s (using 330 data points, chi2=0.06)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,141 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | ..............................
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . Timing measurements:
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . get job = 1 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . initial setup = 163 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . payload setup = 329 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . stage-in = 0 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . payload execution = 21831 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . stage-out = 3 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,142 | INFO     | . log creation = 1 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,143 | INFO     | ..............................
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | 
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | job summary report
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | --------------------------------------------------
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | PanDA job id: 7116270975
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | task id: 49863869
[2026-04-28 14:48:53] 2026-04-28 12:47:52,276 | INFO     | errors: (none)
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | pilot state: finished 
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | transexitcode: 0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | exeerrorcode: 0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | exeerrordiag: 
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | exitcode: 0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | exitmsg: OK
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | cpuconsumptiontime: 82409 s
[2026-04-28 14:48:53] 2026-04-28 12:47:52,277 | INFO     | nevents: 400
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | neventsw: 0
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | pid: 29073
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | pgrp: 29073
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | corecount: 8
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | event service: False
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | sizes: {0: 2280044, 1: 2280729, 2: 2281102, 3: 2282586, 14: 2282586, 22165: 2316741, 22169: 2325795, 22171: 2325933}
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | --------------------------------------------------
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | 
[2026-04-28 14:48:53] 2026-04-28 12:47:52,278 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-04-28 14:48:53] 2026-04-28 12:47:53,076 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,076 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | job 7116270975 has completed (purged errors)
[2026-04-28 14:48:53] 2026-04-28 12:47:53,078 | INFO     | overall cleanup function is called
[2026-04-28 14:48:53] 2026-04-28 12:47:54,087 | INFO     | --- collectZombieJob: --- 10, [29073]
[2026-04-28 14:48:53] 2026-04-28 12:47:54,088 | INFO     | zombie collector waiting for pid 29073
[2026-04-28 14:48:53] 2026-04-28 12:47:54,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 14:48:53] 2026-04-28 12:47:54,088 | INFO     | collected zombie processes
[2026-04-28 14:48:53] 2026-04-28 12:47:54,088 | INFO     | will attempt to kill all subprocesses of pid=29073
[2026-04-28 14:48:53] 2026-04-28 12:47:54,176 | INFO     | process IDs to be killed: [29073] (in reverse order)
[2026-04-28 14:48:53] 2026-04-28 12:47:55,195 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 14:48:53] 2026-04-28 12:47:55,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 14:48:53] 2026-04-28 12:47:55,198 | INFO     | did not find any defunct processes belonging to 29073
[2026-04-28 14:48:53] 2026-04-28 12:47:55,206 | INFO     | did not find any defunct processes belonging to 29073
[2026-04-28 14:48:53] 2026-04-28 12:47:55,206 | INFO     | Ready for new job
[2026-04-28 14:48:53] 2026-04-28 12:47:55,208 | INFO     | ***************************************
[2026-04-28 14:48:53] 2026-04-28 12:47:55,209 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 14:48:53] 2026-04-28 12:47:55,209 | INFO     | ***************************************
[2026-04-28 14:48:53] 2026-04-28 12:47:55,209 | INFO     | 
[2026-04-28 14:48:53] 2026-04-28 12:47:55,209 | INFO     | pilot is running in a VM
[2026-04-28 14:48:53] 2026-04-28 12:47:55,210 | INFO     | architecture information:
[2026-04-28 14:48:53] 2026-04-28 12:47:55,214 | INFO     | executing command: cat /etc/os-release
[2026-04-28 14:48:53] 2026-04-28 12:47:55,322 | INFO     | cat /etc/os-release:
[2026-04-28 14:48:53] NAME="CentOS Linux"
[2026-04-28 14:48:53] VERSION="7 (Core)"
[2026-04-28 14:48:53] ID="centos"
[2026-04-28 14:48:53] ID_LIKE="rhel fedora"
[2026-04-28 14:48:53] VERSION_ID="7"
[2026-04-28 14:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 14:48:53] ANSI_COLOR="0;31"
[2026-04-28 14:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 14:48:53] HOME_URL="https://www.centos.org/"
[2026-04-28 14:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 14:48:53] 
[2026-04-28 14:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 14:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 14:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 14:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 14:48:53] 
[2026-04-28 14:48:53] 2026-04-28 12:47:55,322 | INFO     | ***************************************
[2026-04-28 14:48:53] 2026-04-28 12:47:55,826 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-04-28 14:48:53] 2026-04-28 12:47:56,060 | INFO     | sufficient remaining disk space (494033436672 B)
[2026-04-28 14:48:53] 2026-04-28 12:47:56,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 14:48:53] 2026-04-28 12:47:56,060 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 14:48:53] 2026-04-28 12:47:56,060 | INFO     | update_server=False
[2026-04-28 14:48:53] 2026-04-28 12:47:56,061 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 14:48:53] 2026-04-28 12:47:56,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 14:48:53] 2026-04-28 12:47:56,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 14:48:53] 2026-04-28 12:47:56,957 | INFO     | all data control threads have been joined
[2026-04-28 14:48:53] 2026-04-28 12:47:57,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:48:53] 2026-04-28 12:47:57,022 | INFO     | aborting loop
[2026-04-28 14:48:53] 2026-04-28 12:47:57,067 | INFO     | [job] retrieve thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,259 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:48:53] 2026-04-28 12:47:57,453 | INFO     | all job control threads have been joined
[2026-04-28 14:48:53] 2026-04-28 12:47:57,545 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,567 | INFO     | all payload control threads have been joined
[2026-04-28 14:48:53] 2026-04-28 12:47:57,664 | INFO     | [job] validate thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,822 | INFO     | [payload] failed_post thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,869 | INFO     | [data] copytool_in thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:57,963 | INFO     | [data] control thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,027 | INFO     | [job] job monitor thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,068 | INFO     | [data] copytool_out thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,296 | INFO     | [job] queue monitor thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,331 | INFO     | [payload] validate_post thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,415 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,459 | INFO     | [job] control thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:47:58,573 | INFO     | [payload] control thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:48:00,070 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:48:06,507 | INFO     | job.realtimelogging is not enabled
[2026-04-28 14:48:53] 2026-04-28 12:48:07,513 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 14:48:53] 2026-04-28 12:48:26,016 | INFO     | PID=24605 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 14:48:53] 2026-04-28 12:48:26,016 | INFO     | .. there are 2 such processes running
[2026-04-28 14:48:53] 2026-04-28 12:48:26,018 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 14:48:53] 2026-04-28 12:48:26,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 14:48:53] 2026-04-28 12:48:26,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 14:48:53] 2026-04-28 12:48:42,797 | INFO     | [monitor] cgroup control has ended
[2026-04-28 14:48:53] 2026-04-28 12:48:43,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712460797760)>', '<ExcThread(monitor, started 139712165558016)>']
[2026-04-28 14:48:53] 2026-04-28 12:48:44,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 14:48:53] 2026-04-28 12:48:44,126 | INFO     | [monitor] control thread has ended
[2026-04-28 14:48:53] 2026-04-28 12:48:48,830 | INFO     | all workflow threads have been joined
[2026-04-28 14:48:53] 2026-04-28 12:48:48,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 14:48:53] 2026-04-28 12:48:48,831 | INFO     | traces error code: 0
[2026-04-28 14:48:53] 2026-04-28 12:48:48,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 14:48:53] 2026-04-28 12:48:49,255 [wrapper] ==== pilot stdout END ====
[2026-04-28 14:48:53] 2026-04-28 12:48:49,348 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 14:48:53] 2026-04-28 12:48:49,450 [wrapper] pilotpid: 24605
[2026-04-28 14:48:53] 2026-04-28 12:48:49,495 [wrapper] Pilot exit status: 0
[2026-04-28 14:48:53] 2026-04-28 12:48:49,521 [wrapper] pandaids: 7116270975
[2026-04-28 14:48:53] 2026-04-28 12:48:49,571 [wrapper] cleanup supervisor_pilot  4937 24606
[2026-04-28 14:48:53] 2026-04-28 12:48:49,709 [wrapper] Test setup, not cleaning
[2026-04-28 14:48:53] 2026-04-28 12:48:49,843 [wrapper] apfmon messages muted
[2026-04-28 14:48:53] 2026-04-28 12:48:49,958 [wrapper] ==== wrapper stdout END ====
[2026-04-28 14:48:53] 2026-04-28 12:48:50,067 [wrapper] ==== wrapper stderr END ====
[2026-04-28 14:48:53]  *** Error codes and diagnostics ***
[2026-04-28 14:48:53]     "exeErrorCode": 0,
[2026-04-28 14:48:53]     "pilotErrorCode": 0,
[2026-04-28 14:48:53]  *** Listing of results directory ***
[2026-04-28 14:48:53] total 469260
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc    683926 Apr 27 16:30 pilot3.tar.gz
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc      5631 Apr 27 16:30 queuedata.json
[2026-04-28 14:48:53] -rwx------. 1 boinc boinc     36322 Apr 27 16:31 runpilot2-wrapper.sh
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc       100 Apr 28 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 14:48:53] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 08:30 run_atlas
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc       105 Apr 28 08:30 job.xml
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc      6306 Apr 28 08:30 init_data.xml
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc 260168833 Apr 28 08:30 EVNT.49863867._000014.pool.root.1
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc     15667 Apr 28 08:30 start_atlas.sh
[2026-04-28 14:48:53] drwxrwx--x. 2 boinc boinc        68 Apr 28 08:30 shared
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc    697409 Apr 28 08:30 input.tar.gz
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc         0 Apr 28 08:30 boinc_lockfile
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc      2569 Apr 28 08:30 pandaJob.out
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc       415 Apr 28 08:37 workernode_map.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc    994482 Apr 28 08:38 agis_schedconf.cvmfs.json
[2026-04-28 14:48:53] drwx------. 5 boinc boinc      4096 Apr 28 08:38 pilot3
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc 211274952 Apr 28 14:46 HITS.49863869._000326.pool.root.1
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc       488 Apr 28 14:46 boinc_task_state.xml
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc      1011 Apr 28 14:47 memory_monitor_summary.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc   1512704 Apr 28 14:47 agis_ddmendpoints.agis.ALL.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc    447327 Apr 28 14:47 log.49863869._000326.job.log.tgz.1
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc      6327 Apr 28 14:47 heartbeat_new.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc      6218 Apr 28 14:47 heartbeat.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc        95 Apr 28 14:48 pilot_heartbeat.json
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc      4955 Apr 28 14:48 pilotlog.txt
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc   2035949 Apr 28 14:48 log.49863869._000326.job.log.1
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc      8192 Apr 28 14:48 boinc_mmap_file
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc       357 Apr 28 14:48 output.list
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc        28 Apr 28 14:48 wrapper_checkpoint.txt
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc       410 Apr 28 14:48 runtime_log
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc   2498560 Apr 28 14:48 result.tar.gz
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc      8439 Apr 28 14:48 runtime_log.err
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc       655 Apr 28 14:48 735d2a3dbcf6.diag
[2026-04-28 14:48:53] -rw-r--r--. 1 boinc boinc     20461 Apr 28 14:48 stderr.txt
[2026-04-28 14:48:53] HITS file was successfully produced:
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc 211274952 Apr 28 14:46 shared/HITS.pool.root.1
[2026-04-28 14:48:53]  *** Contents of shared directory: ***
[2026-04-28 14:48:53] total 463536
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc 260168833 Apr 28 08:30 ATLAS.root_0
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc     15667 Apr 28 08:30 start_atlas.sh
[2026-04-28 14:48:53] -rw-r--r--. 2 boinc boinc    697409 Apr 28 08:30 input.tar.gz
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc 211274952 Apr 28 14:46 HITS.pool.root.1
[2026-04-28 14:48:53] -rw-------. 1 boinc boinc   2498560 Apr 28 14:48 result.tar.gz
14:48:55 (20624): run_atlas exited; CPU time 82641.201929
14:48:55 (20624): called boinc_finish(0)

</stderr_txt>
]]>

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