Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 14:06:19 (8340): vboxwrapper version 26210
2026-04-27 14:06:19 (8340): BOINC client version: 7.24.1
2026-04-27 14:06:20 (8340): Detected: VirtualBox VboxManage Interface (Version: 6.1.16)
2026-04-27 14:06:20 (8340): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 14:06:20 (8340): Create VM. (boinc_0fc7c898210e910f, slot#3)
2026-04-27 14:06:23 (8340): Setting Memory Size for VM. (4400MB)
2026-04-27 14:06:23 (8340): Setting CPU Count for VM. (4)
2026-04-27 14:06:24 (8340): Setting Chipset Options for VM.
2026-04-27 14:06:25 (8340): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 14:06:26 (8340): Setting Boot Options for VM.
2026-04-27 14:06:26 (8340): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 14:06:27 (8340): Enabling VM Network Access.
2026-04-27 14:06:28 (8340): Disabling USB Support for VM.
2026-04-27 14:06:29 (8340): Disabling COM Port Support for VM.
2026-04-27 14:06:30 (8340): Disabling LPT Port Support for VM.
2026-04-27 14:06:30 (8340): Disabling Audio Support for VM.
2026-04-27 14:06:31 (8340): Disabling Clipboard Support for VM.
2026-04-27 14:06:31 (8340): Disabling Drag and Drop Support for VM.
2026-04-27 14:06:32 (8340): Adding storage controller(s) to VM.
2026-04-27 14:06:33 (8340): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 14:06:35 (8340): Adding VirtualBox Guest Additions to VM.
2026-04-27 14:06:36 (8340): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 14:06:37 (8340): forwarding host port 55359 to guest port 80
2026-04-27 14:06:37 (8340): Enabling remote desktop for VM.
2026-04-27 14:06:38 (8340): Required extension pack not installed, remote desktop not enabled.
2026-04-27 14:06:38 (8340): Enabling shared directory for VM.
2026-04-27 14:06:39 (8340): Starting VM using VBoxManage interface. (boinc_0fc7c898210e910f, slot#3)
2026-04-27 14:06:46 (8340): Successfully started VM. (PID = '10288')
2026-04-27 14:06:46 (8340): Reporting VM Process ID to BOINC.
2026-04-27 14:06:46 (8340): Guest Log: BIOS: VirtualBox 6.1.16
2026-04-27 14:06:46 (8340): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 14:06:46 (8340): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 14:06:46 (8340): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 14:06:46 (8340): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 14:06:46 (8340): Detected: Web Application Enabled (http://localhost:55359)
2026-04-27 14:06:46 (8340): Preference change detected
2026-04-27 14:06:46 (8340): Setting CPU throttle for VM. (40%)
2026-04-27 14:06:47 (8340): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 14:06:48 (8340): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 14:06:48 (8340): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 14:46:13 (8392): vboxwrapper version 26210
2026-04-27 14:46:13 (8392): BOINC client version: 7.24.1
2026-04-27 14:46:15 (8392): Detected: VirtualBox VboxManage Interface (Version: 6.1.16)
2026-04-27 14:46:16 (8392): Guest Log: BIOS: VirtualBox 6.1.16
2026-04-27 14:46:16 (8392): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 14:46:16 (8392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 14:46:16 (8392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 14:46:16 (8392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 14:46:16 (8392): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 14:46:17 (8392): Starting VM using VBoxManage interface. (boinc_0fc7c898210e910f, slot#3)
2026-04-27 14:46:36 (8392): Successfully started VM. (PID = '24044')
2026-04-27 14:46:36 (8392): Reporting VM Process ID to BOINC.
2026-04-27 14:46:36 (8392): Guest Log: BIOS: VirtualBox 6.1.16
2026-04-27 14:46:36 (8392): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 14:46:36 (8392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 14:46:36 (8392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 14:46:36 (8392): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 14:46:36 (8392): Detected: Web Application Enabled (http://localhost:55359)
2026-04-27 14:46:36 (8392): Preference change detected
2026-04-27 14:46:36 (8392): Setting CPU throttle for VM. (40%)
2026-04-27 14:46:36 (8392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 14:46:39 (8392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 14:46:40 (8392): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 14:46:47 (8392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 14:46:47 (8392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 14:46:47 (8392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 14:47:05 (8392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 14:47:05 (8392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-27 14:47:28 (8392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.000140 main     Log opened 2026-04-27T14:47:27.610170000Z
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.000590 main     OS Product: Linux
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.000757 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.000953 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.001092 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.001093 main     Process ID: 1285
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.001093 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 14:47:28 (8392): Guest Log: 00:00:00.002334 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 14:47:28 (8392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 14:47:28 (8392): Guest Log: [INFO] Mounting shared directory
2026-04-27 14:47:29 (8392): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 14:47:38 (8392): Guest Log: 00:00:10.050597 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 892 377 000ns (GuestNow=1 777 315 658 506 292 000 ns GuestLast=1 777 301 247 613 915 000 ns fSetTimeLastLoop=true )
2026-04-27 14:47:39 (8392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 14:47:39 (8392): Guest Log: [INFO] Detected branch: prod
2026-04-27 14:47:39 (8392): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 14:47:39 (8392): Guest Log: Copying input files
2026-04-27 14:51:11 (8392): Guest Log: Copied input files into RunAtlas.
2026-04-27 14:51:11 (8392): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-27 14:51:11 (8392): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-27 14:51:11 (8392): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-27 14:51:11 (8392): Guest Log: Further information can be found at the LHC@home message board.
2026-04-27 14:52:20 (8392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 14:52:21 (8392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 14:52:21 (8392): Guest Log: 2.6.3.0 1563 4 30184 158938 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-27 14:52:25 (8392): Guest Log: copied the webapp to /var/www
2026-04-27 14:52:25 (8392): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-27 14:52:25 (8392): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-27 14:52:26 (8392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 14:52:26 (8392): Guest Log:  *** Starting ATLAS job. (PandaID=7116268184 taskID=49820375) ***
2026-04-27 14:54:52 (8392): VM state change detected. (old = 'running', new = 'paused')
2026-04-27 14:55:12 (8392): VM state change detected. (old = 'paused', new = 'running')
2026-04-27 14:59:22 (8392): Guest Log:  *** Job finished ***
2026-04-27 14:59:22 (8392): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:30,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:30,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:56,686 | INFO     | [monitor] cgroup control has ended
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:56,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006990976832)>', '<ExcThread(monitor, started 140006253385472)>']
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:57,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:58:57,120 | INFO     | [monitor] control thread has ended
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:01,715 | INFO     | all workflow threads have been joined
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:01,715 | INFO     | end of generic workflow (traces error code: 0)
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:01,715 | INFO     | traces error code: 0
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:01,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,079 [wrapper] ==== pilot stdout END ====
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,086 [wrapper] ==== wrapper stdout RESUME ====
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,096 [wrapper] pilotpid: 6047
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,106 [wrapper] Pilot exit status: 0
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,223 [wrapper] pandaids: 7116268184
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,293 [wrapper] cleanup supervisor_pilot  6053 6048
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,301 [wrapper] Test setup, not cleaning
2026-04-27 14:59:22 (8392): Guest Log: 2026-04-27 18:59:02,311 [wrapper] apfmon messages muted
2026-04-27 14:59:23 (8392): Guest Log: 2026-04-27 18:59:02,318 [wrapper] ==== wrapper stdout END ====
2026-04-27 14:59:23 (8392): Guest Log: 2026-04-27 18:59:02,327 [wrapper] ==== wrapper stderr END ====
2026-04-27 14:59:23 (8392): Guest Log:  *** Error codes and diagnostics ***
2026-04-27 14:59:23 (8392): Guest Log:     "exeErrorCode": 0,
2026-04-27 14:59:23 (8392): Guest Log:     "pilotErrorCode": 1315,
2026-04-27 14:59:23 (8392): Guest Log:     "pilotErrorDiag": "Unknown transform failure:PyJobTransforms.trfDecorators.exception_wrapper  CRITICAL Got a general exception in the outer exception handler: Failed to open file EVNT.49820373._000054.pool.root.1",
2026-04-27 14:59:23 (8392): Guest Log:  *** Listing of results directory ***
2026-04-27 14:59:23 (8392): Guest Log: total 4128
2026-04-27 14:59:23 (8392): Guest Log: -rwx------. 1 atlas atlas   36322 Apr 27 14:30 runpilot2-wrapper.sh
2026-04-27 14:59:23 (8392): Guest Log: -rw-r--r--. 1 atlas atlas  683926 Apr 27 14:30 pilot3.tar.gz
2026-04-27 14:59:23 (8392): Guest Log: -rw-r--r--. 1 atlas atlas    5631 Apr 27 14:30 queuedata.json
2026-04-27 14:59:23 (8392): Guest Log: -rwxr-xr-x. 1 atlas atlas    6023 Apr 27 18:51 init_data.xml
2026-04-27 14:59:23 (8392): Guest Log: -rwxr-xr-x. 1 atlas atlas  697413 Apr 27 18:51 input.tar.gz
2026-04-27 14:59:23 (8392): Guest Log: -rwxr-xr-x. 1 atlas atlas   15667 Apr 27 18:51 start_atlas.sh
2026-04-27 14:59:23 (8392): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 27 18:51 EVNT.49820373._000054.pool.root.1 -> /data/./ATLAS.root_0
2026-04-27 14:59:23 (8392): Guest Log: -rw-r--r--. 1 atlas atlas    2584 Apr 27 18:52 pandaJob.out
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas  997763 Apr 27 18:53 agis_schedconf.cvmfs.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas 1512704 Apr 27 18:53 agis_ddmendpoints.agis.ALL.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas     426 Apr 27 18:53 workernode_map.json
2026-04-27 14:59:23 (8392): Guest Log: drwx------. 5 atlas atlas    4096 Apr 27 18:53 pilot3
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas     954 Apr 27 18:55 memory_monitor_summary.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas   10657 Apr 27 18:55 log.49820375._017783.job.log.tgz.1
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas      95 Apr 27 18:57 pilot_heartbeat.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas    3310 Apr 27 18:57 heartbeat_new.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas    3248 Apr 27 18:57 heartbeat.json
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas    4990 Apr 27 18:59 pilotlog.txt
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas   78980 Apr 27 18:59 log.49820375._017783.job.log.1
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas     188 Apr 27 18:59 output.list
2026-04-27 14:59:23 (8392): Guest Log: -rw-r--r--. 1 atlas atlas     410 Apr 27 18:59 runtime_log
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas  102400 Apr 27 18:59 result.tar.gz
2026-04-27 14:59:23 (8392): Guest Log: -rw-r--r--. 1 atlas atlas    8245 Apr 27 18:59 runtime_log.err
2026-04-27 14:59:23 (8392): Guest Log: -rw-------. 1 atlas atlas     650 Apr 27 18:59 73108ef98079.diag
2026-04-27 14:59:23 (8392): Guest Log: Looking for outputfile HITS.49820375._017783.pool.root.1
2026-04-27 14:59:23 (8392): Guest Log: No HITS file was produced
2026-04-27 14:59:23 (8392): Guest Log: Successfully finished the ATLAS job!
2026-04-27 14:59:23 (8392): Guest Log: Copying the results back to the shared directory!
2026-04-27 14:59:23 (8392): Guest Log:  *** Contents of shared directory: ***
2026-04-27 14:59:23 (8392): Guest Log: total 2175332
2026-04-27 14:59:23 (8392): Guest Log: -rwxrwxrwx. 1 root root 2226710147 Apr 27 18:06 ATLAS.root_0
2026-04-27 14:59:23 (8392): Guest Log: -rwxrwxrwx. 1 root root       6023 Apr 27 18:06 init_data.xml
2026-04-27 14:59:23 (8392): Guest Log: -rwxrwxrwx. 1 root root     697413 Apr 27 17:25 input.tar.gz
2026-04-27 14:59:23 (8392): Guest Log: -rwxrwxrwx. 1 root root     102400 Apr 27  2026 result.tar.gz
2026-04-27 14:59:23 (8392): Guest Log: -rwxrwxrwx. 1 root root      15667 Apr 27 17:25 start_atlas.sh
2026-04-27 14:59:23 (8392): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-27 14:59:23 (8392): VM Completion File Detected.
2026-04-27 14:59:23 (8392): Powering off VM.
2026-04-27 14:59:24 (8392): Successfully stopped VM.
2026-04-27 14:59:24 (8392): Deregistering VM. (boinc_0fc7c898210e910f, slot#3)
2026-04-27 14:59:25 (8392): Removing network bandwidth throttle group from VM.
2026-04-27 14:59:25 (8392): Removing VM from VirtualBox.
2026-04-27 14:59:31 (8392): called boinc_finish(0)

</stderr_txt>
]]>

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