Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:46 (869504): wrapper (7.7.26015): starting
10:22:46 (869504): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 10:22:46] Arguments: --nthreads 8
[2026-04-27 10:22:46] Threads: 8
[2026-04-27 10:22:46] Checking for CVMFS
[2026-04-27 10:22:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 10:22:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 10:22:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 10:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 10:22:47] 2.13.3.0 7236 178513 158448 158930 0 348 22521112 40960001 22686 16776704 0 764456408 99.671 670532493 35936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-27 10:22:47] CVMFS is ok
[2026-04-27 10:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 10:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 10:22:47] Further information can be found at the LHC@home message board.
[2026-04-27 10:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 10:22:47] Checking for apptainer binary...
[2026-04-27 10:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 10:22:47] Running /usr/bin/apptainer --version
[2026-04-27 10:22:47] apptainer version 1.4.5-2.el9
[2026-04-27 10:22:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 10:22:47] c-212-11.aglt2.org
[2026-04-27 10:22:47] apptainer works
[2026-04-27 10:22:47] Set ATHENA_PROC_NUMBER=8
[2026-04-27 10:22:47] Set ATHENA_CORE_NUMBER=8
[2026-04-27 10:22:47] Starting ATLAS job with PandaID=7116253730
[2026-04-27 10:22:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:20:11 (869504): BOINC client no longer exists - exiting
12:20:11 (869504): timer handler: client dead, exiting
12:30:23 (1281895): wrapper (7.7.26015): starting
12:30:23 (1281895): wrapper: running run_atlas (--nthreads 9)
[2026-04-27 12:30:23] Arguments: --nthreads 9
[2026-04-27 12:30:23] Threads: 9
[2026-04-27 12:30:23] This job has been restarted, cleaning up previous attempt
[2026-04-27 12:30:23] Checking for CVMFS
[2026-04-27 12:30:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 12:30:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 12:30:24] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 12:30:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 12:30:24] 2.13.3.0 7236 178641 156792 158935 0 403 26015842 40960000 21025 16776704 0 765111471 99.671 671621455 35939 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-27 12:30:24] CVMFS is ok
[2026-04-27 12:30:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 12:30:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 12:30:24] Further information can be found at the LHC@home message board.
[2026-04-27 12:30:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 12:30:24] Checking for apptainer binary...
[2026-04-27 12:30:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 12:30:24] Running /usr/bin/apptainer --version
[2026-04-27 12:30:24] apptainer version 1.4.5-2.el9
[2026-04-27 12:30:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 12:30:24] c-212-11.aglt2.org
[2026-04-27 12:30:24] apptainer works
[2026-04-27 12:30:24] Set ATHENA_PROC_NUMBER=9
[2026-04-27 12:30:24] Set ATHENA_CORE_NUMBER=9
[2026-04-27 12:30:25] Starting ATLAS job with PandaID=7116253730
[2026-04-27 12:30:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 16:46:30]  *** The last 200 lines of the pilot log: ***
[2026-04-27 16:46:30] 2026-04-27 20:39:56,162 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,162 | INFO     | log transfer has been attempted: DONE
[2026-04-27 16:46:30] 2026-04-27 20:39:56,162 | INFO     | job 7116253730 has finished - writing final server update
[2026-04-27 16:46:30] 2026-04-27 20:39:56,162 | INFO     | total number of processed events: 400 (read)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,189 | INFO     | monitor loop #1014: job 0:7116253730 is in state 'finished'
[2026-04-27 16:46:30] 2026-04-27 20:39:56,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,193 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7116253730/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,194 | INFO     | extracted standard info from prmon json
[2026-04-27 16:46:30] 2026-04-27 20:39:56,194 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 16:46:30] 2026-04-27 20:39:56,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 16:46:30] 2026-04-27 20:39:56,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 16:46:30] 2026-04-27 20:39:56,205 | INFO     | fitting pss+swap vs Time
[2026-04-27 16:46:30] 2026-04-27 20:39:56,206 | INFO     | sum of square deviations: 4560078556.669392
[2026-04-27 16:46:30] 2026-04-27 20:39:56,208 | INFO     | sum of deviations: 41507862777.38777
[2026-04-27 16:46:30] 2026-04-27 20:39:56,208 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,208 | INFO     | mean y: 2563739.7346938774
[2026-04-27 16:46:30] 2026-04-27 20:39:56,208 | INFO     | intersect: 2563739.7346938774
[2026-04-27 16:46:30] 2026-04-27 20:39:56,208 | INFO     | chi2: 2.2577575188019168
[2026-04-27 16:46:30] 2026-04-27 20:39:56,209 | INFO     | sum of square deviations: 4286550591.662489
[2026-04-27 16:46:30] 2026-04-27 20:39:56,214 | INFO     | sum of deviations: 56205910331.612495
[2026-04-27 16:46:30] 2026-04-27 20:39:56,214 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,214 | INFO     | mean y: 2571786.654166667
[2026-04-27 16:46:30] 2026-04-27 20:39:56,215 | INFO     | intersect: 2571786.654166667
[2026-04-27 16:46:30] 2026-04-27 20:39:56,215 | INFO     | chi2: 1.564811050241202
[2026-04-27 16:46:30] 2026-04-27 20:39:56,215 | INFO     | current chi2=1.564811050241202 (change=30.691802055361023 %)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,215 | INFO     | sum of square deviations: 4024185626.655324
[2026-04-27 16:46:30] 2026-04-27 20:39:56,217 | INFO     | sum of deviations: 54633596191.40858
[2026-04-27 16:46:30] 2026-04-27 20:39:56,217 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,217 | INFO     | mean y: 2570872.6212765956
[2026-04-27 16:46:30] 2026-04-27 20:39:56,217 | INFO     | intersect: 2570872.6212765956
[2026-04-27 16:46:30] 2026-04-27 20:39:56,221 | INFO     | chi2: 1.5651947010191984
[2026-04-27 16:46:30] 2026-04-27 20:39:56,221 | INFO     | current chi2=1.5651947010191984 (change=-0.024517386807644682 %)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,222 | INFO     | right removable region: 234
[2026-04-27 16:46:30] 2026-04-27 20:39:56,222 | INFO     | sum of square deviations: 4286545101.662489
[2026-04-27 16:46:30] 2026-04-27 20:39:56,223 | INFO     | sum of deviations: -427116123.0874882
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | mean y: 2586933.2875
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | intersect: 2586933.2875
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | chi2: 0.7582334376351774
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | current chi2=0.7582334376351774 (change=66.41652474542371 %)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,224 | INFO     | sum of square deviations: 4024174646.655324
[2026-04-27 16:46:30] 2026-04-27 20:39:56,230 | INFO     | sum of deviations: -7033586065.208513
[2026-04-27 16:46:30] 2026-04-27 20:39:56,230 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,230 | INFO     | mean y: 2590738.578723404
[2026-04-27 16:46:30] 2026-04-27 20:39:56,230 | INFO     | intersect: 2590738.578723404
[2026-04-27 16:46:30] 2026-04-27 20:39:56,231 | INFO     | chi2: 0.7172136418337014
[2026-04-27 16:46:30] 2026-04-27 20:39:56,231 | INFO     | current chi2=0.7172136418337014 (change=5.409916493449682 %)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,231 | INFO     | left removable region: 10
[2026-04-27 16:46:30] 2026-04-27 20:39:56,231 | INFO     | sum of square deviations: 3485119415.6383963
[2026-04-27 16:46:30] 2026-04-27 20:39:56,233 | INFO     | sum of deviations: 7411575653.660714
[2026-04-27 16:46:30] 2026-04-27 20:39:56,233 | INFO     | mean x (centered): 0.0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,233 | INFO     | mean y: 2599320.4821428573
[2026-04-27 16:46:30] 2026-04-27 20:39:56,233 | INFO     | intersect: 2599320.4821428573
[2026-04-27 16:46:30] 2026-04-27 20:39:56,237 | INFO     | chi2: 0.009899749578588501
[2026-04-27 16:46:30] 2026-04-27 20:39:56,237 | INFO     | current memory leak: 2.13 B/s (using 224 data points, chi2=0.01)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,238 | INFO     | could have reported an average CPU frequency of 3147 MHz (12 samples)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,238 | INFO     | ..............................
[2026-04-27 16:46:30] 2026-04-27 20:39:56,238 | INFO     | . Timing measurements:
[2026-04-27 16:46:30] 2026-04-27 20:39:56,238 | INFO     | . get job = 0 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . initial setup = 1 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . payload setup = 15 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . stage-in = 0 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . payload execution = 14916 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . stage-out = 3 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | . log creation = 0 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,239 | INFO     | ..............................
[2026-04-27 16:46:30] 2026-04-27 20:39:56,560 | INFO     | 
[2026-04-27 16:46:30] 2026-04-27 20:39:56,560 | INFO     | job summary report
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | --------------------------------------------------
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | PanDA job id: 7116253730
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | task id: 49820244
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | errors: (none)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | pilot state: finished 
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | transexitcode: 0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | exeerrorcode: 0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | exeerrordiag: 
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | exitcode: 0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | exitmsg: OK
[2026-04-27 16:46:30] 2026-04-27 20:39:56,561 | INFO     | cpuconsumptiontime: 60718 s
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | nevents: 400
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | neventsw: 0
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | pid: 1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | pgrp: 1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | corecount: 9
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | event service: False
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | sizes: {0: 2274280, 1: 2276109, 12: 2276109, 14936: 2307501, 14939: 2322845, 14942: 2322901, 14943: 2323223}
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | --------------------------------------------------
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | 
[2026-04-27 16:46:30] 2026-04-27 20:39:56,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-27 16:46:30] 2026-04-27 20:39:56,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,671 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 16:46:30] 2026-04-27 20:39:56,672 | INFO     | job 7116253730 has completed (purged errors)
[2026-04-27 16:46:30] 2026-04-27 20:39:56,672 | INFO     | overall cleanup function is called
[2026-04-27 16:46:30] 2026-04-27 20:39:57,701 | INFO     | --- collectZombieJob: --- 10, [1312646]
[2026-04-27 16:46:30] 2026-04-27 20:39:57,701 | INFO     | zombie collector waiting for pid 1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:57,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 16:46:30] 2026-04-27 20:39:57,702 | INFO     | collected zombie processes
[2026-04-27 16:46:30] 2026-04-27 20:39:57,702 | INFO     | will attempt to kill all subprocesses of pid=1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:58,710 | INFO     | process IDs to be killed: [1312646] (in reverse order)
[2026-04-27 16:46:30] 2026-04-27 20:39:59,105 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 16:46:30] 2026-04-27 20:39:59,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 16:46:30] 2026-04-27 20:39:59,150 | INFO     | did not find any defunct processes belonging to 1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:59,190 | INFO     | did not find any defunct processes belonging to 1312646
[2026-04-27 16:46:30] 2026-04-27 20:39:59,190 | INFO     | Ready for new job
[2026-04-27 16:46:30] 2026-04-27 20:39:59,200 | INFO     | ***************************************
[2026-04-27 16:46:30] 2026-04-27 20:39:59,200 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 16:46:30] 2026-04-27 20:39:59,200 | INFO     | ***************************************
[2026-04-27 16:46:30] 2026-04-27 20:39:59,200 | INFO     | 
[2026-04-27 16:46:30] 2026-04-27 20:39:59,209 | INFO     | architecture information:
[2026-04-27 16:46:30] 2026-04-27 20:39:59,210 | INFO     | executing command: cat /etc/os-release
[2026-04-27 16:46:30] 2026-04-27 20:39:59,309 | INFO     | cat /etc/os-release:
[2026-04-27 16:46:30] NAME="CentOS Linux"
[2026-04-27 16:46:30] VERSION="7 (Core)"
[2026-04-27 16:46:30] ID="centos"
[2026-04-27 16:46:30] ID_LIKE="rhel fedora"
[2026-04-27 16:46:30] VERSION_ID="7"
[2026-04-27 16:46:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 16:46:30] ANSI_COLOR="0;31"
[2026-04-27 16:46:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 16:46:30] HOME_URL="https://www.centos.org/"
[2026-04-27 16:46:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 16:46:30] 
[2026-04-27 16:46:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 16:46:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 16:46:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 16:46:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 16:46:30] 
[2026-04-27 16:46:30] 2026-04-27 20:39:59,310 | INFO     | ***************************************
[2026-04-27 16:46:30] 2026-04-27 20:39:59,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-27 16:46:30] 2026-04-27 20:39:59,881 | INFO     | sufficient remaining disk space (102270763008 B)
[2026-04-27 16:46:30] 2026-04-27 20:39:59,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 16:46:30] 2026-04-27 20:39:59,882 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 16:46:30] 2026-04-27 20:39:59,882 | INFO     | update_server=False
[2026-04-27 16:46:30] 2026-04-27 20:39:59,882 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 16:46:30] 2026-04-27 20:39:59,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:46:30] 2026-04-27 20:39:59,882 | INFO     | aborting loop
[2026-04-27 16:46:30] 2026-04-27 20:40:00,674 | INFO     | all job control threads have been joined
[2026-04-27 16:46:30] 2026-04-27 20:40:00,887 | INFO     | [job] retrieve thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:00,889 | INFO     | [job] job monitor thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:00,930 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:00,938 | INFO     | all data control threads have been joined
[2026-04-27 16:46:30] 2026-04-27 20:40:00,982 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,165 | INFO     | all payload control threads have been joined
[2026-04-27 16:46:30] 2026-04-27 20:40:01,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 16:46:30] 2026-04-27 20:40:01,278 | INFO     | [payload] failed_post thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:46:30] 2026-04-27 20:40:01,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,680 | INFO     | [job] control thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,689 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,697 | INFO     | [payload] validate_post thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:01,944 | INFO     | [data] control thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:02,089 | INFO     | [data] copytool_in thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:02,171 | INFO     | [payload] control thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:02,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 16:46:30] 2026-04-27 20:40:02,208 | INFO     | [job] validate thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:02,585 | INFO     | [job] queue monitor thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:03,260 | INFO     | [data] copytool_out thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:06,211 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 16:46:30] 2026-04-27 20:40:07,336 | INFO     | [monitor] cgroup control has ended
[2026-04-27 16:46:30] 2026-04-27 20:40:09,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269334533952)>', '<ExcThread(monitor, started 140268976195328)>']
[2026-04-27 16:46:30] 2026-04-27 20:40:14,137 | INFO     | all workflow threads have been joined
[2026-04-27 16:46:30] 2026-04-27 20:40:14,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 16:46:30] 2026-04-27 20:40:14,138 | INFO     | traces error code: 0
[2026-04-27 16:46:30] 2026-04-27 20:40:14,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 16:46:30] 2026-04-27 20:40:30,225 | INFO     | PID=1300577 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 16:46:30] 2026-04-27 20:40:30,225 | INFO     | .. there are 25 such processes running
[2026-04-27 16:46:30] 2026-04-27 20:40:30,229 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 16:46:30] 2026-04-27 20:40:30,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 16:46:30] 2026-04-27 20:40:30,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 16:46:30] 2026-04-27 20:40:30,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 16:46:30] 2026-04-27 20:40:30,230 | INFO     | [monitor] control thread has ended
[2026-04-27 16:46:30] 2026-04-27 20:40:30,586 [wrapper] ==== pilot stdout END ====
[2026-04-27 16:46:30] 2026-04-27 20:40:30,622 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 16:46:30] 2026-04-27 20:40:30,671 [wrapper] pilotpid: 1300577
[2026-04-27 16:46:30] 2026-04-27 20:40:30,702 [wrapper] Pilot exit status: 0
[2026-04-27 16:46:30] 2026-04-27 20:40:30,830 [wrapper] pandaids: 7116253730 7116253730
[2026-04-27 16:46:30] 2026-04-27 20:40:31,161 [wrapper] cleanup supervisor_pilot 2171456 1300580
[2026-04-27 16:46:30] 2026-04-27 20:40:31,169 [wrapper] Test setup, not cleaning
[2026-04-27 16:46:30] 2026-04-27 20:40:31,180 [wrapper] apfmon messages muted
[2026-04-27 16:46:30] 2026-04-27 20:40:31,217 [wrapper] ==== wrapper stdout END ====
[2026-04-27 16:46:30] 2026-04-27 20:40:31,231 [wrapper] ==== wrapper stderr END ====
[2026-04-27 16:46:30]  *** Error codes and diagnostics ***
[2026-04-27 16:46:30]     "exeErrorCode": 0,
[2026-04-27 16:46:30]     "pilotErrorCode": 0,
[2026-04-27 16:46:30]  *** Listing of results directory ***
[2026-04-27 16:46:30] total 4637376
[2026-04-27 16:46:30] drwx------. 5 boincer umatlas       4096 Apr 22 05:13 pilot3
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas     683926 Apr 27 05:30 pilot3.tar.gz
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas       5631 Apr 27 05:32 queuedata.json
[2026-04-27 16:46:30] -rwx------. 1 boincer umatlas      36322 Apr 27 05:32 runpilot2-wrapper.sh
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas        100 Apr 27 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 16:46:30] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 27 10:22 run_atlas
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas        105 Apr 27 10:22 job.xml
[2026-04-27 16:46:30] -rw-r--r--. 3 boincer umatlas 2230781997 Apr 27 10:22 EVNT.49820242._000051.pool.root.1
[2026-04-27 16:46:30] -rw-r--r--. 3 boincer umatlas 2230781997 Apr 27 10:22 ATLAS.root_0
[2026-04-27 16:46:30] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 10:22 start_atlas.sh
[2026-04-27 16:46:30] drwxrwx--x. 2 boincer umatlas       4096 Apr 27 10:22 shared
[2026-04-27 16:46:30] -rw-r--r--. 2 boincer umatlas     697414 Apr 27 10:22 input.tar.gz
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas          0 Apr 27 10:22 boinc_lockfile
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas       2549 Apr 27 12:30 pandaJob.out
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas         57 Apr 27 12:30 setup.sh.local
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas     997697 Apr 27 12:30 agis_schedconf.cvmfs.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas        429 Apr 27 12:30 workernode_map.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas  279256372 Apr 27 16:39 HITS.49820244._021510.pool.root.1
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas        489 Apr 27 16:39 boinc_task_state.xml
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas       1049 Apr 27 16:39 memory_monitor_summary.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas    1512704 Apr 27 16:39 agis_ddmendpoints.agis.ALL.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas     523123 Apr 27 16:39 log.49820244._021510.job.log.tgz.1
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas       6375 Apr 27 16:39 heartbeat_new.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas       6266 Apr 27 16:39 heartbeat.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas         96 Apr 27 16:40 pilot_heartbeat.json
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas        823 Apr 27 16:40 pilotlog.txt
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas    1330543 Apr 27 16:40 log.49820244._021510.job.log.1
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas        357 Apr 27 16:40 output.list
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas        410 Apr 27 16:40 runtime_log
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas    1873920 Apr 27 16:40 result.tar.gz
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas       9050 Apr 27 16:40 runtime_log.err
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas        786 Apr 27 16:40 2d408495035f.diag
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas       6875 Apr 27 16:46 init_data.xml
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas       8192 Apr 27 16:46 boinc_mmap_file
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas         28 Apr 27 16:46 wrapper_checkpoint.txt
[2026-04-27 16:46:30] -rw-r--r--. 1 boincer umatlas      23341 Apr 27 16:46 stderr.txt
[2026-04-27 16:46:30] HITS file was successfully produced:
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas 279256372 Apr 27 16:39 shared/HITS.pool.root.1
[2026-04-27 16:46:30]  *** Contents of shared directory: ***
[2026-04-27 16:46:30] total 2453752
[2026-04-27 16:46:30] -rw-r--r--. 3 boincer umatlas 2230781997 Apr 27 10:22 ATLAS.root_0
[2026-04-27 16:46:30] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 10:22 start_atlas.sh
[2026-04-27 16:46:30] -rw-r--r--. 2 boincer umatlas     697414 Apr 27 10:22 input.tar.gz
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas  279256372 Apr 27 16:39 HITS.pool.root.1
[2026-04-27 16:46:30] -rw-------. 1 boincer umatlas    1873920 Apr 27 16:40 result.tar.gz
16:46:32 (1281895): run_atlas exited; CPU time 61157.158629
16:46:32 (1281895): called boinc_finish(0)

</stderr_txt>
]]>

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