Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:45:16 (1444524): wrapper (7.7.26015): starting
09:45:16 (1444524): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 09:45:16] Arguments: --nthreads 8
[2026-04-27 09:45:16] Threads: 8
[2026-04-27 09:45:16] Checking for CVMFS
[2026-04-27 09:45:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 09:45:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 09:45:16] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 09:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 09:45:17] 2.13.3.0 14328 248985 247332 158928 0 575 37287247 40960000 36493 16776704 0 2905437297 99.770 1843181532 43722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-27 09:45:17] CVMFS is ok
[2026-04-27 09:45:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 09:45:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 09:45:17] Further information can be found at the LHC@home message board.
[2026-04-27 09:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 09:45:17] Checking for apptainer binary...
[2026-04-27 09:45:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 09:45:17] Running /usr/bin/apptainer --version
[2026-04-27 09:45:18] apptainer version 1.4.5-2.el9
[2026-04-27 09:45:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 09:45:18] c8-16-2.aglt2.org
[2026-04-27 09:45:18] apptainer works
[2026-04-27 09:45:18] Set ATHENA_PROC_NUMBER=8
[2026-04-27 09:45:18] Set ATHENA_CORE_NUMBER=8
[2026-04-27 09:45:18] Starting ATLAS job with PandaID=7116253131
[2026-04-27 09:45:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 12:11:14]  *** The last 200 lines of the pilot log: ***
[2026-04-27 12:11:14] 2026-04-27 16:10:05,565 | INFO     | monitor loop #591: job 0:7116253131 is in state 'finished'
[2026-04-27 12:11:14] 2026-04-27 16:10:05,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,213 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 12:11:14] 2026-04-27 16:10:07,346 | INFO     | job 7116253131 has state=finished
[2026-04-27 12:11:14] 2026-04-27 16:10:07,347 | INFO     | preparing for final server update for job 7116253131 in state='finished'
[2026-04-27 12:11:14] 2026-04-27 16:10:07,507 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,507 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7116253131/jobReport.json
[2026-04-27 12:11:14] 2026-04-27 16:10:07,508 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-27 12:11:14] 2026-04-27 16:10:07,520 | INFO     | this job has now completed (state=finished)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,520 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,520 | INFO     | log transfer has been attempted: DONE
[2026-04-27 12:11:14] 2026-04-27 16:10:07,520 | INFO     | job 7116253131 has finished - writing final server update
[2026-04-27 12:11:14] 2026-04-27 16:10:07,521 | INFO     | total number of processed events: 400 (read)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,553 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7116253131/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,553 | INFO     | extracted standard info from prmon json
[2026-04-27 12:11:14] 2026-04-27 16:10:07,553 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 12:11:14] 2026-04-27 16:10:07,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 12:11:14] 2026-04-27 16:10:07,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 12:11:14] 2026-04-27 16:10:07,555 | INFO     | fitting pss+swap vs Time
[2026-04-27 12:11:14] 2026-04-27 16:10:07,555 | INFO     | sum of square deviations: 850829532.5428559
[2026-04-27 12:11:14] 2026-04-27 16:10:07,556 | INFO     | sum of deviations: 40277515563.95715
[2026-04-27 12:11:14] 2026-04-27 16:10:07,556 | INFO     | mean x (centered): 0.0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,556 | INFO     | mean y: 2456653.192857143
[2026-04-27 12:11:14] 2026-04-27 16:10:07,556 | INFO     | intersect: 2456653.192857143
[2026-04-27 12:11:14] 2026-04-27 16:10:07,564 | INFO     | chi2: 4.057303698235971
[2026-04-27 12:11:14] 2026-04-27 16:10:07,564 | INFO     | sum of square deviations: 762886137.5259277
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | sum of deviations: 48295741425.65923
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | mean x (centered): 0.0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | mean y: 2470064.7925925925
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | intersect: 2470064.7925925925
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | chi2: 3.248974321773877
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | current chi2=3.248974321773877 (change=19.922821572699593 %)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | right removable region: 134
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | sum of square deviations: 762881257.5259277
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | sum of deviations: 1542190549.0740776
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | mean x (centered): 0.0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,565 | INFO     | mean y: 2523536.7407407407
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | intersect: 2523536.7407407407
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | chi2: 1.0462634463083884
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | current chi2=1.0462634463083884 (change=74.21283876868075 %)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | sum of square deviations: 681212170.0076928
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | sum of deviations: -7267274416.907692
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | mean x (centered): 0.0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | mean y: 2539857.7384615387
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | intersect: 2539857.7384615387
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | chi2: 0.8850170555763722
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | current chi2=0.8850170555763722 (change=15.41164333906094 %)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,566 | INFO     | left removable region: 10
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | sum of square deviations: 591176200.4838698
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | sum of deviations: 1821767139.1290321
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | mean x (centered): 0.0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | mean y: 2557614.4838709678
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | intersect: 2557614.4838709678
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | chi2: 0.021182797121991993
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | current memory leak: 3.08 B/s (using 124 data points, chi2=0.02)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,567 | INFO     | could have reported an average CPU frequency of 3800 MHz (8 samples)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | ..............................
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . Timing measurements:
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . get job = 0 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . initial setup = 35 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . payload setup = 67 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . stage-in = 0 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . payload execution = 8515 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . stage-out = 2 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | . log creation = 1 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,568 | INFO     | ..............................
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | 
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | job summary report
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | --------------------------------------------------
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | PanDA job id: 7116253131
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | task id: 49820244
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | errors: (none)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | pilot state: finished 
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | transexitcode: 0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | exeerrorcode: 0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | exeerrordiag: 
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | exitcode: 0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | exitmsg: OK
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | cpuconsumptiontime: 40755 s
[2026-04-27 12:11:14] 2026-04-27 16:10:07,718 | INFO     | nevents: 400
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | neventsw: 0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | pid: 1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | pgrp: 1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | corecount: 8
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | event service: False
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | sizes: {0: 2274328, 1: 2276157, 8588: 2304489, 8589: 2304488, 8591: 2313542, 8594: 2313598, 8595: 2313920}
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | --------------------------------------------------
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | 
[2026-04-27 12:11:14] 2026-04-27 16:10:07,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-27 12:11:14] 2026-04-27 16:10:07,918 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 12:11:14] 2026-04-27 16:10:07,920 | INFO     | job 7116253131 has completed (purged errors)
[2026-04-27 12:11:14] 2026-04-27 16:10:07,920 | INFO     | overall cleanup function is called
[2026-04-27 12:11:14] 2026-04-27 16:10:08,927 | INFO     | --- collectZombieJob: --- 10, [1458291]
[2026-04-27 12:11:14] 2026-04-27 16:10:08,927 | INFO     | zombie collector waiting for pid 1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:08,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 12:11:14] 2026-04-27 16:10:08,927 | INFO     | collected zombie processes
[2026-04-27 12:11:14] 2026-04-27 16:10:08,927 | INFO     | will attempt to kill all subprocesses of pid=1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:09,612 | INFO     | process IDs to be killed: [1458291] (in reverse order)
[2026-04-27 12:11:14] 2026-04-27 16:10:10,084 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 12:11:14] 2026-04-27 16:10:10,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 12:11:14] 2026-04-27 16:10:10,122 | INFO     | did not find any defunct processes belonging to 1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:10,145 | INFO     | did not find any defunct processes belonging to 1458291
[2026-04-27 12:11:14] 2026-04-27 16:10:10,145 | INFO     | Ready for new job
[2026-04-27 12:11:14] 2026-04-27 16:10:10,146 | INFO     | ***************************************
[2026-04-27 12:11:14] 2026-04-27 16:10:10,146 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 12:11:14] 2026-04-27 16:10:10,146 | INFO     | ***************************************
[2026-04-27 12:11:14] 2026-04-27 16:10:10,146 | INFO     | 
[2026-04-27 12:11:14] 2026-04-27 16:10:10,151 | INFO     | architecture information:
[2026-04-27 12:11:14] 2026-04-27 16:10:10,155 | INFO     | executing command: cat /etc/os-release
[2026-04-27 12:11:14] 2026-04-27 16:10:10,309 | INFO     | cat /etc/os-release:
[2026-04-27 12:11:14] NAME="CentOS Linux"
[2026-04-27 12:11:14] VERSION="7 (Core)"
[2026-04-27 12:11:14] ID="centos"
[2026-04-27 12:11:14] ID_LIKE="rhel fedora"
[2026-04-27 12:11:14] VERSION_ID="7"
[2026-04-27 12:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 12:11:14] ANSI_COLOR="0;31"
[2026-04-27 12:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 12:11:14] HOME_URL="https://www.centos.org/"
[2026-04-27 12:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 12:11:14] 
[2026-04-27 12:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 12:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 12:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 12:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 12:11:14] 
[2026-04-27 12:11:14] 2026-04-27 16:10:10,310 | INFO     | ***************************************
[2026-04-27 12:11:14] 2026-04-27 16:10:10,819 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-27 12:11:14] 2026-04-27 16:10:11,031 | INFO     | sufficient remaining disk space (152850923520 B)
[2026-04-27 12:11:14] 2026-04-27 16:10:11,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 12:11:14] 2026-04-27 16:10:11,032 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 12:11:14] 2026-04-27 16:10:11,032 | INFO     | update_server=False
[2026-04-27 12:11:14] 2026-04-27 16:10:11,032 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 12:11:14] 2026-04-27 16:10:11,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 12:11:14] 2026-04-27 16:10:11,602 | INFO     | aborting loop
[2026-04-27 12:11:14] 2026-04-27 16:10:11,771 | INFO     | all data control threads have been joined
[2026-04-27 12:11:14] 2026-04-27 16:10:11,874 | INFO     | all payload control threads have been joined
[2026-04-27 12:11:14] 2026-04-27 16:10:12,037 | INFO     | [job] retrieve thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,086 | INFO     | [data] copytool_in thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,347 | INFO     | [payload] validate_post thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 12:11:14] 2026-04-27 16:10:12,425 | INFO     | [job] validate thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,426 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,447 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,584 | INFO     | all job control threads have been joined
[2026-04-27 12:11:14] 2026-04-27 16:10:12,606 | INFO     | [job] job monitor thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,719 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 12:11:14] 2026-04-27 16:10:12,779 | INFO     | [data] control thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:12,881 | INFO     | [payload] control thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:13,350 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:13,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 12:11:14] 2026-04-27 16:10:13,428 | INFO     | [payload] failed_post thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:13,589 | INFO     | [job] control thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:13,739 | INFO     | [job] queue monitor thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:14,395 | INFO     | [data] copytool_out thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:17,375 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 12:11:14] 2026-04-27 16:10:40,978 | INFO     | PID=1449267 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 12:11:14] 2026-04-27 16:10:40,978 | INFO     | .. there are 43 such processes running
[2026-04-27 12:11:14] 2026-04-27 16:10:40,978 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 12:11:14] 2026-04-27 16:10:40,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 12:11:14] 2026-04-27 16:10:40,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 12:11:14] 2026-04-27 16:11:06,330 | INFO     | [monitor] cgroup control has ended
[2026-04-27 12:11:14] 2026-04-27 16:11:07,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523634792256)>', '<ExcThread(monitor, started 140522907744000)>']
[2026-04-27 12:11:14] 2026-04-27 16:11:08,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 12:11:14] 2026-04-27 16:11:08,177 | INFO     | [monitor] control thread has ended
[2026-04-27 12:11:14] 2026-04-27 16:11:12,714 | INFO     | all workflow threads have been joined
[2026-04-27 12:11:14] 2026-04-27 16:11:12,716 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 12:11:14] 2026-04-27 16:11:12,716 | INFO     | traces error code: 0
[2026-04-27 12:11:14] 2026-04-27 16:11:12,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 12:11:14] 2026-04-27 16:11:13,013 [wrapper] ==== pilot stdout END ====
[2026-04-27 12:11:14] 2026-04-27 16:11:13,070 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 12:11:14] 2026-04-27 16:11:13,102 [wrapper] pilotpid: 1449267
[2026-04-27 12:11:14] 2026-04-27 16:11:13,112 [wrapper] Pilot exit status: 0
[2026-04-27 12:11:14] 2026-04-27 16:11:13,285 [wrapper] pandaids: 7116253131
[2026-04-27 12:11:14] 2026-04-27 16:11:13,797 [wrapper] cleanup supervisor_pilot 2243237 1449268
[2026-04-27 12:11:14] 2026-04-27 16:11:13,803 [wrapper] Test setup, not cleaning
[2026-04-27 12:11:14] 2026-04-27 16:11:13,817 [wrapper] apfmon messages muted
[2026-04-27 12:11:14] 2026-04-27 16:11:13,834 [wrapper] ==== wrapper stdout END ====
[2026-04-27 12:11:14] 2026-04-27 16:11:13,876 [wrapper] ==== wrapper stderr END ====
[2026-04-27 12:11:14]  *** Error codes and diagnostics ***
[2026-04-27 12:11:14]     "exeErrorCode": 0,
[2026-04-27 12:11:14]     "pilotErrorCode": 0,
[2026-04-27 12:11:14]  *** Listing of results directory ***
[2026-04-27 12:11:14] total 2445996
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas     683926 Apr 27 05:30 pilot3.tar.gz
[2026-04-27 12:11:14] -rwx------. 1 boincer umatlas      36322 Apr 27 05:31 runpilot2-wrapper.sh
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas       5631 Apr 27 05:32 queuedata.json
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas        100 Apr 27 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 12:11:14] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 27 09:45 run_atlas
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas        105 Apr 27 09:45 job.xml
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas 2221372132 Apr 27 09:45 EVNT.49820242._000049.pool.root.1
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 09:45 start_atlas.sh
[2026-04-27 12:11:14] drwxrwx--x. 2 boincer umatlas       4096 Apr 27 09:45 shared
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas     697412 Apr 27 09:45 input.tar.gz
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas          0 Apr 27 09:45 boinc_lockfile
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas       2548 Apr 27 09:45 pandaJob.out
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas         57 Apr 27 09:45 setup.sh.local
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas     996913 Apr 27 09:46 agis_schedconf.cvmfs.json
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas    1508585 Apr 27 09:46 agis_ddmendpoints.agis.ALL.json
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas        431 Apr 27 09:46 workernode_map.json
[2026-04-27 12:11:14] drwx------. 5 boincer umatlas       4096 Apr 27 09:46 pilot3
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas  276949338 Apr 27 12:08 HITS.49820244._021202.pool.root.1
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas        489 Apr 27 12:09 boinc_task_state.xml
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas       1049 Apr 27 12:09 memory_monitor_summary.json
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas         95 Apr 27 12:09 pilot_heartbeat.json
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas     337206 Apr 27 12:10 log.49820244._021202.job.log.tgz.1
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas       6374 Apr 27 12:10 heartbeat_new.json
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas       6265 Apr 27 12:10 heartbeat.json
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas       7089 Apr 27 12:10 init_data.xml
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas       8192 Apr 27 12:11 boinc_mmap_file
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas         27 Apr 27 12:11 wrapper_checkpoint.txt
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas       4824 Apr 27 12:11 pilotlog.txt
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas     781398 Apr 27 12:11 log.49820244._021202.job.log.1
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas        357 Apr 27 12:11 output.list
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas        410 Apr 27 12:11 runtime_log
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas    1136640 Apr 27 12:11 result.tar.gz
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas       8959 Apr 27 12:11 runtime_log.err
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas        656 Apr 27 12:11 2d07b2f5abae.diag
[2026-04-27 12:11:14] -rw-r--r--. 1 boincer umatlas      21271 Apr 27 12:11 stderr.txt
[2026-04-27 12:11:14] HITS file was successfully produced:
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas 276949338 Apr 27 12:08 shared/HITS.pool.root.1
[2026-04-27 12:11:14]  *** Contents of shared directory: ***
[2026-04-27 12:11:14] total 2441592
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas 2221372132 Apr 27 09:45 ATLAS.root_0
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 09:45 start_atlas.sh
[2026-04-27 12:11:14] -rw-r--r--. 2 boincer umatlas     697412 Apr 27 09:45 input.tar.gz
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas  276949338 Apr 27 12:08 HITS.pool.root.1
[2026-04-27 12:11:14] -rw-------. 1 boincer umatlas    1136640 Apr 27 12:11 result.tar.gz
12:11:16 (1444524): run_atlas exited; CPU time 41001.699271
12:11:16 (1444524): called boinc_finish(0)

</stderr_txt>
]]>

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