Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:26:54 (17450): wrapper (7.7.26015): starting
04:26:54 (17450): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 04:26:54] Arguments: --nthreads 8
[2026-04-28 04:26:54] Threads: 8
[2026-04-28 04:26:54] Checking for CVMFS
[2026-04-28 04:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 04:26:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 04:26:57] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 04:26:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 04:26:58] 2.11.2.0 18262 7031 98516 158950 3 56 25034365 25165824 1864 130560 0 3804131 99.906 1269895 3428 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 04:26:58] CVMFS is ok
[2026-04-28 04:26:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 04:26:58] Checking for apptainer binary...
[2026-04-28 04:26:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 04:26:58] Running /usr/bin/apptainer --version
[2026-04-28 04:26:59] apptainer version 1.3.2-1.el7
[2026-04-28 04:26:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 04:27:06] cg-vwn371.simple-grid.lan
[2026-04-28 04:27:06] apptainer works
[2026-04-28 04:27:06] Set ATHENA_PROC_NUMBER=8
[2026-04-28 04:27:06] Set ATHENA_CORE_NUMBER=8
[2026-04-28 04:27:06] Starting ATLAS job with PandaID=7116253787
[2026-04-28 04:27:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 12:00:51]  *** The last 200 lines of the pilot log: ***
[2026-04-28 12:00:51] 2026-04-28 09:59:55,128 | INFO     | log transfer has been attempted: DONE
[2026-04-28 12:00:51] 2026-04-28 09:59:55,128 | INFO     | job 7116253787 has finished - writing final server update
[2026-04-28 12:00:51] 2026-04-28 09:59:55,128 | INFO     | total number of processed events: 400 (read)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,131 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7116253787/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,131 | INFO     | extracted standard info from prmon json
[2026-04-28 12:00:51] 2026-04-28 09:59:55,132 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 12:00:51] 2026-04-28 09:59:55,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 12:00:51] 2026-04-28 09:59:55,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 12:00:51] 2026-04-28 09:59:55,141 | INFO     | fitting pss+swap vs Time
[2026-04-28 12:00:51] 2026-04-28 09:59:55,142 | INFO     | sum of square deviations: 25523715770.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,157 | INFO     | sum of deviations: 73230343230.00002
[2026-04-28 12:00:51] 2026-04-28 09:59:55,157 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,157 | INFO     | mean y: 2543409.4137931033
[2026-04-28 12:00:51] 2026-04-28 09:59:55,157 | INFO     | intersect: 2543409.4137931033
[2026-04-28 12:00:51] 2026-04-28 09:59:55,158 | INFO     | chi2: 5.264426781269821
[2026-04-28 12:00:51] 2026-04-28 09:59:55,159 | INFO     | sum of square deviations: 24653662247.5
[2026-04-28 12:00:51] 2026-04-28 09:59:55,164 | INFO     | sum of deviations: 101720015152.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,165 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,165 | INFO     | mean y: 2548354.646511628
[2026-04-28 12:00:51] 2026-04-28 09:59:55,165 | INFO     | intersect: 2548354.646511628
[2026-04-28 12:00:51] 2026-04-28 09:59:55,166 | INFO     | chi2: 4.5140953349172435
[2026-04-28 12:00:51] 2026-04-28 09:59:55,166 | INFO     | current chi2=4.5140953349172435 (change=14.252861280589249 %)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,166 | INFO     | right removable region: 429
[2026-04-28 12:00:51] 2026-04-28 09:59:55,167 | INFO     | sum of square deviations: 24653662247.5
[2026-04-28 12:00:51] 2026-04-28 09:59:55,173 | INFO     | sum of deviations: -70559077254.5
[2026-04-28 12:00:51] 2026-04-28 09:59:55,173 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,173 | INFO     | mean y: 2568587.476744186
[2026-04-28 12:00:51] 2026-04-28 09:59:55,174 | INFO     | intersect: 2568587.476744186
[2026-04-28 12:00:51] 2026-04-28 09:59:55,174 | INFO     | chi2: 1.3768229713226305
[2026-04-28 12:00:51] 2026-04-28 09:59:55,175 | INFO     | current chi2=1.3768229713226305 (change=73.84666881072035 %)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,181 | INFO     | sum of square deviations: 23803609100.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,186 | INFO     | sum of deviations: -103716093203.00002
[2026-04-28 12:00:51] 2026-04-28 09:59:55,187 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,187 | INFO     | mean y: 2574506.9411764704
[2026-04-28 12:00:51] 2026-04-28 09:59:55,191 | INFO     | intersect: 2574506.9411764704
[2026-04-28 12:00:51] 2026-04-28 09:59:55,192 | INFO     | chi2: 1.0324807494352508
[2026-04-28 12:00:51] 2026-04-28 09:59:55,192 | INFO     | current chi2=1.0324807494352508 (change=25.009912607471314 %)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,193 | INFO     | sum of square deviations: 22973323765.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,199 | INFO     | sum of deviations: -96822761515.50003
[2026-04-28 12:00:51] 2026-04-28 09:59:55,200 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,200 | INFO     | mean y: 2573233.1166666667
[2026-04-28 12:00:51] 2026-04-28 09:59:55,200 | INFO     | intersect: 2573233.1166666667
[2026-04-28 12:00:51] 2026-04-28 09:59:55,201 | INFO     | chi2: 1.0185876251745647
[2026-04-28 12:00:51] 2026-04-28 09:59:55,201 | INFO     | current chi2=1.0185876251745647 (change=1.3456061305051372 %)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,201 | INFO     | left removable region: 15
[2026-04-28 12:00:51] 2026-04-28 09:59:55,202 | INFO     | sum of square deviations: 22002747427.5
[2026-04-28 12:00:51] 2026-04-28 09:59:55,208 | INFO     | sum of deviations: -67313339417.5
[2026-04-28 12:00:51] 2026-04-28 09:59:55,208 | INFO     | mean x (centered): 0.0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,208 | INFO     | mean y: 2578732.137681159
[2026-04-28 12:00:51] 2026-04-28 09:59:55,208 | INFO     | intersect: 2578732.137681159
[2026-04-28 12:00:51] 2026-04-28 09:59:55,209 | INFO     | chi2: 0.23609209982380494
[2026-04-28 12:00:51] 2026-04-28 09:59:55,210 | INFO     | current memory leak: -3.06 B/s (using 414 data points, chi2=0.24)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,210 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | ..............................
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . Timing measurements:
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . get job = 0 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . initial setup = 98 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . payload setup = 147 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . stage-in = 0 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . payload execution = 26651 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,211 | INFO     | . stage-out = 3 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,212 | INFO     | . log creation = 1 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,212 | INFO     | ..............................
[2026-04-28 12:00:51] 2026-04-28 09:59:55,472 | INFO     | 
[2026-04-28 12:00:51] 2026-04-28 09:59:55,472 | INFO     | job summary report
[2026-04-28 12:00:51] 2026-04-28 09:59:55,472 | INFO     | --------------------------------------------------
[2026-04-28 12:00:51] 2026-04-28 09:59:55,472 | INFO     | PanDA job id: 7116253787
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | task id: 49820244
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | errors: (none)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | pilot state: finished 
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | transexitcode: 0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | exeerrorcode: 0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | exeerrordiag: 
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | exitcode: 0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | exitmsg: OK
[2026-04-28 12:00:51] 2026-04-28 09:59:55,473 | INFO     | cpuconsumptiontime: 103747 s
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | nevents: 400
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | neventsw: 0
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | pid: 26238
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | pgrp: 26238
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | corecount: 8
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | event service: False
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | sizes: {0: 2267467, 1: 2282453, 12: 2282453, 26803: 2318798, 26807: 2327796, 26809: 2327852, 26810: 2328174}
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | --------------------------------------------------
[2026-04-28 12:00:51] 2026-04-28 09:59:55,474 | INFO     | 
[2026-04-28 12:00:51] 2026-04-28 09:59:55,475 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-28 12:00:51] 2026-04-28 09:59:55,595 | INFO     | PID=21642 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-28 12:00:51] 2026-04-28 09:59:55,595 | INFO     | .. there are 9 such processes running
[2026-04-28 12:00:51] 2026-04-28 09:59:55,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,899 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,899 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 12:00:51] 2026-04-28 09:59:55,899 | INFO     | job 7116253787 has completed (purged errors)
[2026-04-28 12:00:51] 2026-04-28 09:59:55,899 | INFO     | overall cleanup function is called
[2026-04-28 12:00:51] 2026-04-28 09:59:56,907 | INFO     | --- collectZombieJob: --- 10, [26238]
[2026-04-28 12:00:51] 2026-04-28 09:59:56,907 | INFO     | zombie collector waiting for pid 26238
[2026-04-28 12:00:51] 2026-04-28 09:59:56,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 12:00:51] 2026-04-28 09:59:56,908 | INFO     | collected zombie processes
[2026-04-28 12:00:51] 2026-04-28 09:59:56,908 | INFO     | will attempt to kill all subprocesses of pid=26238
[2026-04-28 12:00:51] 2026-04-28 09:59:57,013 | INFO     | process IDs to be killed: [26238] (in reverse order)
[2026-04-28 12:00:51] 2026-04-28 09:59:57,994 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 12:00:51] 2026-04-28 09:59:57,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 12:00:51] 2026-04-28 09:59:57,998 | INFO     | did not find any defunct processes belonging to 26238
[2026-04-28 12:00:51] 2026-04-28 09:59:58,001 | INFO     | did not find any defunct processes belonging to 26238
[2026-04-28 12:00:51] 2026-04-28 09:59:58,002 | INFO     | Ready for new job
[2026-04-28 12:00:51] 2026-04-28 09:59:58,004 | INFO     | ***************************************
[2026-04-28 12:00:51] 2026-04-28 09:59:58,005 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 12:00:51] 2026-04-28 09:59:58,005 | INFO     | ***************************************
[2026-04-28 12:00:51] 2026-04-28 09:59:58,005 | INFO     | 
[2026-04-28 12:00:51] 2026-04-28 09:59:58,006 | INFO     | pilot is running in a VM
[2026-04-28 12:00:51] 2026-04-28 09:59:58,006 | INFO     | architecture information:
[2026-04-28 12:00:51] 2026-04-28 09:59:58,014 | INFO     | executing command: cat /etc/os-release
[2026-04-28 12:00:51] 2026-04-28 09:59:58,313 | INFO     | cat /etc/os-release:
[2026-04-28 12:00:51] NAME="CentOS Linux"
[2026-04-28 12:00:51] VERSION="7 (Core)"
[2026-04-28 12:00:51] ID="centos"
[2026-04-28 12:00:51] ID_LIKE="rhel fedora"
[2026-04-28 12:00:51] VERSION_ID="7"
[2026-04-28 12:00:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 12:00:51] ANSI_COLOR="0;31"
[2026-04-28 12:00:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 12:00:51] HOME_URL="https://www.centos.org/"
[2026-04-28 12:00:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 12:00:51] 
[2026-04-28 12:00:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 12:00:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 12:00:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 12:00:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 12:00:51] 
[2026-04-28 12:00:51] 2026-04-28 09:59:58,314 | INFO     | ***************************************
[2026-04-28 12:00:51] 2026-04-28 09:59:58,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-28 12:00:51] 2026-04-28 09:59:59,079 | INFO     | sufficient remaining disk space (492133416960 B)
[2026-04-28 12:00:51] 2026-04-28 09:59:59,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 12:00:51] 2026-04-28 09:59:59,080 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 12:00:51] 2026-04-28 09:59:59,080 | INFO     | update_server=False
[2026-04-28 12:00:51] 2026-04-28 09:59:59,080 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 12:00:51] 2026-04-28 09:59:59,151 | INFO     | all data control threads have been joined
[2026-04-28 12:00:51] 2026-04-28 09:59:59,215 | INFO     | all payload control threads have been joined
[2026-04-28 12:00:51] 2026-04-28 09:59:59,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:00:51] 2026-04-28 09:59:59,299 | INFO     | aborting loop
[2026-04-28 12:00:51] 2026-04-28 09:59:59,934 | INFO     | all job control threads have been joined
[2026-04-28 12:00:51] 2026-04-28 10:00:00,086 | INFO     | [job] retrieve thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,133 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,157 | INFO     | [data] control thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,221 | INFO     | [payload] control thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 12:00:51] 2026-04-28 10:00:00,305 | INFO     | [job] job monitor thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,324 | INFO     | [payload] failed_post thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,382 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 12:00:51] 2026-04-28 10:00:00,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:00:51] 2026-04-28 10:00:00,816 | INFO     | [data] copytool_in thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:00,940 | INFO     | [job] control thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:01,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:01,315 | INFO     | [job] validate thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:01,328 | INFO     | [payload] validate_post thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:01,480 | INFO     | [job] queue monitor thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:01,504 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:02,263 | INFO     | [data] copytool_out thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:04,474 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 12:00:51] 2026-04-28 10:00:27,825 | INFO     | PID=21642 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 12:00:51] 2026-04-28 10:00:27,826 | INFO     | .. there are 9 such processes running
[2026-04-28 12:00:51] 2026-04-28 10:00:27,826 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 12:00:51] 2026-04-28 10:00:27,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 12:00:51] 2026-04-28 10:00:27,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 12:00:51] 2026-04-28 10:00:39,457 | INFO     | [monitor] cgroup control has ended
[2026-04-28 12:00:51] 2026-04-28 10:00:41,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094793393984)>', '<ExcThread(monitor, started 140094367323904)>']
[2026-04-28 12:00:51] 2026-04-28 10:00:41,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 12:00:51] 2026-04-28 10:00:41,910 | INFO     | [monitor] control thread has ended
[2026-04-28 12:00:51] 2026-04-28 10:00:46,348 | INFO     | all workflow threads have been joined
[2026-04-28 12:00:51] 2026-04-28 10:00:46,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 12:00:51] 2026-04-28 10:00:46,348 | INFO     | traces error code: 0
[2026-04-28 12:00:51] 2026-04-28 10:00:46,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 12:00:51] 2026-04-28 10:00:46,616 [wrapper] ==== pilot stdout END ====
[2026-04-28 12:00:51] 2026-04-28 10:00:46,698 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 12:00:51] 2026-04-28 10:00:46,757 [wrapper] pilotpid: 21642
[2026-04-28 12:00:51] 2026-04-28 10:00:46,796 [wrapper] Pilot exit status: 0
[2026-04-28 12:00:51] 2026-04-28 10:00:47,120 [wrapper] pandaids: 7116253787
[2026-04-28 12:00:51] 2026-04-28 10:00:48,132 [wrapper] cleanup supervisor_pilot  2720 21643
[2026-04-28 12:00:51] 2026-04-28 10:00:48,274 [wrapper] Test setup, not cleaning
[2026-04-28 12:00:51] 2026-04-28 10:00:48,417 [wrapper] apfmon messages muted
[2026-04-28 12:00:51] 2026-04-28 10:00:48,555 [wrapper] ==== wrapper stdout END ====
[2026-04-28 12:00:51] 2026-04-28 10:00:48,682 [wrapper] ==== wrapper stderr END ====
[2026-04-28 12:00:51]  *** Error codes and diagnostics ***
[2026-04-28 12:00:51]     "exeErrorCode": 0,
[2026-04-28 12:00:51]     "pilotErrorCode": 0,
[2026-04-28 12:00:51]  *** Listing of results directory ***
[2026-04-28 12:00:51] total 2456624
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc     683926 Apr 27 11:30 pilot3.tar.gz
[2026-04-28 12:00:51] -rwx------. 1 boinc boinc      36322 Apr 27 11:34 runpilot2-wrapper.sh
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc       5631 Apr 27 11:37 queuedata.json
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc        100 Apr 28 04:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 12:00:51] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 04:26 run_atlas
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc        105 Apr 28 04:26 job.xml
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc 2229771246 Apr 28 04:26 EVNT.49820242._000052.pool.root.1
[2026-04-28 12:00:51] drwxrwx--x. 2 boinc boinc         68 Apr 28 04:26 shared
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc     697414 Apr 28 04:26 input.tar.gz
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc       6306 Apr 28 04:26 init_data.xml
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc      15667 Apr 28 04:26 start_atlas.sh
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc          0 Apr 28 04:26 boinc_lockfile
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc       2548 Apr 28 04:27 pandaJob.out
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc        415 Apr 28 04:32 workernode_map.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc     997414 Apr 28 04:32 agis_schedconf.cvmfs.json
[2026-04-28 12:00:51] drwx------. 5 boinc boinc       4096 Apr 28 04:32 pilot3
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc  275857901 Apr 28 11:58 HITS.49820244._021567.pool.root.1
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc        491 Apr 28 11:58 boinc_task_state.xml
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc         95 Apr 28 11:59 pilot_heartbeat.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc       1019 Apr 28 11:59 memory_monitor_summary.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc    1512704 Apr 28 11:59 agis_ddmendpoints.agis.ALL.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc     492273 Apr 28 11:59 log.49820244._021567.job.log.tgz.1
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc       6348 Apr 28 11:59 heartbeat_new.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc       6239 Apr 28 11:59 heartbeat.json
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc       4883 Apr 28 12:00 pilotlog.txt
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc    2423228 Apr 28 12:00 log.49820244._021567.job.log.1
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc       8192 Apr 28 12:00 boinc_mmap_file
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc         29 Apr 28 12:00 wrapper_checkpoint.txt
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc        357 Apr 28 12:00 output.list
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc        410 Apr 28 12:00 runtime_log
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc    2928640 Apr 28 12:00 result.tar.gz
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc       8439 Apr 28 12:00 runtime_log.err
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc        658 Apr 28 12:00 2dbd8b718938.diag
[2026-04-28 12:00:51] -rw-r--r--. 1 boinc boinc      20717 Apr 28 12:00 stderr.txt
[2026-04-28 12:00:51] HITS file was successfully produced:
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc 275857901 Apr 28 11:58 shared/HITS.pool.root.1
[2026-04-28 12:00:51]  *** Contents of shared directory: ***
[2026-04-28 12:00:51] total 2450468
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc 2229771246 Apr 28 04:26 ATLAS.root_0
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc     697414 Apr 28 04:26 input.tar.gz
[2026-04-28 12:00:51] -rw-r--r--. 2 boinc boinc      15667 Apr 28 04:26 start_atlas.sh
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc  275857901 Apr 28 11:58 HITS.pool.root.1
[2026-04-28 12:00:51] -rw-------. 1 boinc boinc    2928640 Apr 28 12:00 result.tar.gz
12:00:53 (17450): run_atlas exited; CPU time 104161.287558
12:00:53 (17450): called boinc_finish(0)

</stderr_txt>
]]>

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