Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:27:29 (7654): wrapper (7.7.26015): starting
07:27:29 (7654): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 07:27:29] Arguments: --nthreads 8
[2026-04-28 07:27:29] Threads: 8
[2026-04-28 07:27:29] Checking for CVMFS
[2026-04-28 07:27:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 07:27:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 07:27:36] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 07:27:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 07:27:38] 2.11.2.0 16919 18038 101720 158955 1 54 21457619 25165825 96 130560 0 5913194 99.918 5917636 10489 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 07:27:38] CVMFS is ok
[2026-04-28 07:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 07:27:38] Checking for apptainer binary...
[2026-04-28 07:27:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 07:27:38] Running /usr/bin/apptainer --version
[2026-04-28 07:27:38] apptainer version 1.3.2-1.el7
[2026-04-28 07:27:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 07:28:08] cg-vwn361.simple-grid.lan
[2026-04-28 07:28:08] apptainer works
[2026-04-28 07:28:08] Set ATHENA_PROC_NUMBER=8
[2026-04-28 07:28:08] Set ATHENA_CORE_NUMBER=8
[2026-04-28 07:28:08] Starting ATLAS job with PandaID=7116253968
[2026-04-28 07:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 14:53:38]  *** The last 200 lines of the pilot log: ***
[2026-04-28 14:53:38] 2026-04-28 12:52:52,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 14:53:38] 2026-04-28 12:52:52,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 14:53:38] 2026-04-28 12:52:52,226 | INFO     | fitting pss+swap vs Time
[2026-04-28 14:53:38] 2026-04-28 12:52:52,227 | INFO     | sum of square deviations: 23635978050.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,233 | INFO     | sum of deviations: 341784025593.00006
[2026-04-28 14:53:38] 2026-04-28 12:52:52,233 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,234 | INFO     | mean y: 2495948.419811321
[2026-04-28 14:53:38] 2026-04-28 12:52:52,234 | INFO     | intersect: 2495948.419811321
[2026-04-28 14:53:38] 2026-04-28 12:52:52,234 | INFO     | chi2: 10.634341962920951
[2026-04-28 14:53:38] 2026-04-28 12:52:52,235 | INFO     | sum of square deviations: 22809618370.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,242 | INFO     | sum of deviations: 366450033966.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,242 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,242 | INFO     | mean y: 2500449.415274463
[2026-04-28 14:53:38] 2026-04-28 12:52:52,242 | INFO     | intersect: 2500449.415274463
[2026-04-28 14:53:38] 2026-04-28 12:52:52,243 | INFO     | chi2: 9.914639405241696
[2026-04-28 14:53:38] 2026-04-28 12:52:52,243 | INFO     | current chi2=9.914639405241696 (change=6.767720656234885 %)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,243 | INFO     | right removable region: 418
[2026-04-28 14:53:38] 2026-04-28 12:52:52,244 | INFO     | sum of square deviations: 22809618370.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,251 | INFO     | sum of deviations: 181222674903.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,251 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,251 | INFO     | mean y: 2525579.801909308
[2026-04-28 14:53:38] 2026-04-28 12:52:52,251 | INFO     | intersect: 2525579.801909308
[2026-04-28 14:53:38] 2026-04-28 12:52:52,252 | INFO     | chi2: 5.137103167847013
[2026-04-28 14:53:38] 2026-04-28 12:52:52,252 | INFO     | current chi2=5.137103167847013 (change=51.69326709862546 %)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,253 | INFO     | sum of square deviations: 22002747427.5
[2026-04-28 14:53:38] 2026-04-28 12:52:52,259 | INFO     | sum of deviations: 48611070068.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,259 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,259 | INFO     | mean y: 2550635.0966183576
[2026-04-28 14:53:38] 2026-04-28 12:52:52,259 | INFO     | intersect: 2550635.0966183576
[2026-04-28 14:53:38] 2026-04-28 12:52:52,260 | INFO     | chi2: 1.6253054664771827
[2026-04-28 14:53:38] 2026-04-28 12:52:52,260 | INFO     | current chi2=1.6253054664771827 (change=68.36144003005576 %)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,261 | INFO     | sum of square deviations: 21215132660.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,267 | INFO     | sum of deviations: -5362061650.000004
[2026-04-28 14:53:38] 2026-04-28 12:52:52,267 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,267 | INFO     | mean y: 2561040.6234718827
[2026-04-28 14:53:38] 2026-04-28 12:52:52,267 | INFO     | intersect: 2561040.6234718827
[2026-04-28 14:53:38] 2026-04-28 12:52:52,268 | INFO     | chi2: 0.823715383173682
[2026-04-28 14:53:38] 2026-04-28 12:52:52,268 | INFO     | current chi2=0.823715383173682 (change=49.31934949071028 %)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,269 | INFO     | sum of square deviations: 20446541505.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,274 | INFO     | sum of deviations: -9896772492.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,274 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,274 | INFO     | mean y: 2561932.871287129
[2026-04-28 14:53:38] 2026-04-28 12:52:52,275 | INFO     | intersect: 2561932.871287129
[2026-04-28 14:53:38] 2026-04-28 12:52:52,275 | INFO     | chi2: 0.8089214017503347
[2026-04-28 14:53:38] 2026-04-28 12:52:52,275 | INFO     | current chi2=0.8089214017503347 (change=1.7960064514453742 %)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,276 | INFO     | left removable region: 20
[2026-04-28 14:53:38] 2026-04-28 12:52:52,276 | INFO     | sum of square deviations: 19549015839.5
[2026-04-28 14:53:38] 2026-04-28 12:52:52,281 | INFO     | sum of deviations: 17612320587.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,286 | INFO     | mean x (centered): 0.0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,286 | INFO     | mean y: 2567471.527638191
[2026-04-28 14:53:38] 2026-04-28 12:52:52,287 | INFO     | intersect: 2567471.527638191
[2026-04-28 14:53:38] 2026-04-28 12:52:52,287 | INFO     | chi2: 0.022466733078999303
[2026-04-28 14:53:38] 2026-04-28 12:52:52,287 | INFO     | current memory leak: 0.90 B/s (using 398 data points, chi2=0.02)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,288 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | ..............................
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . Timing measurements:
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . get job = 0 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . initial setup = 161 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . payload setup = 215 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . stage-in = 0 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . payload execution = 25995 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . stage-out = 2 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,289 | INFO     | . log creation = 0 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,290 | INFO     | ..............................
[2026-04-28 14:53:38] 2026-04-28 12:52:52,419 | INFO     | 
[2026-04-28 14:53:38] 2026-04-28 12:52:52,419 | INFO     | job summary report
[2026-04-28 14:53:38] 2026-04-28 12:52:52,419 | INFO     | --------------------------------------------------
[2026-04-28 14:53:38] 2026-04-28 12:52:52,419 | INFO     | PanDA job id: 7116253968
[2026-04-28 14:53:38] 2026-04-28 12:52:52,419 | INFO     | task id: 49820244
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | errors: (none)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | pilot state: finished 
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | transexitcode: 0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | exeerrorcode: 0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | exeerrordiag: 
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | exitcode: 0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | exitmsg: OK
[2026-04-28 14:53:38] 2026-04-28 12:52:52,420 | INFO     | cpuconsumptiontime: 105461 s
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | nevents: 400
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | neventsw: 0
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | pid: 16108
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | pgrp: 16108
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | corecount: 8
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | event service: False
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | sizes: {0: 2280676, 1: 2262344, 2: 2282505, 12: 2282533, 26214: 2318708, 26215: 2318707, 26218: 2328083}
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | --------------------------------------------------
[2026-04-28 14:53:38] 2026-04-28 12:52:52,421 | INFO     | 
[2026-04-28 14:53:38] 2026-04-28 12:52:52,422 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-28 14:53:38] 2026-04-28 12:52:52,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | job 7116253968 has completed (purged errors)
[2026-04-28 14:53:38] 2026-04-28 12:52:52,850 | INFO     | overall cleanup function is called
[2026-04-28 14:53:38] 2026-04-28 12:52:53,860 | INFO     | --- collectZombieJob: --- 10, [16108]
[2026-04-28 14:53:38] 2026-04-28 12:52:53,860 | INFO     | zombie collector waiting for pid 16108
[2026-04-28 14:53:38] 2026-04-28 12:52:53,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 14:53:38] 2026-04-28 12:52:53,861 | INFO     | collected zombie processes
[2026-04-28 14:53:38] 2026-04-28 12:52:53,861 | INFO     | will attempt to kill all subprocesses of pid=16108
[2026-04-28 14:53:38] 2026-04-28 12:52:53,915 | INFO     | process IDs to be killed: [16108] (in reverse order)
[2026-04-28 14:53:38] 2026-04-28 12:52:54,696 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 14:53:38] 2026-04-28 12:52:54,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 14:53:38] 2026-04-28 12:52:54,698 | INFO     | did not find any defunct processes belonging to 16108
[2026-04-28 14:53:38] 2026-04-28 12:52:54,700 | INFO     | did not find any defunct processes belonging to 16108
[2026-04-28 14:53:38] 2026-04-28 12:52:54,700 | INFO     | Ready for new job
[2026-04-28 14:53:38] 2026-04-28 12:52:54,703 | INFO     | ***************************************
[2026-04-28 14:53:38] 2026-04-28 12:52:54,703 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 14:53:38] 2026-04-28 12:52:54,703 | INFO     | ***************************************
[2026-04-28 14:53:38] 2026-04-28 12:52:54,703 | INFO     | 
[2026-04-28 14:53:38] 2026-04-28 12:52:54,704 | INFO     | pilot is running in a VM
[2026-04-28 14:53:38] 2026-04-28 12:52:54,704 | INFO     | architecture information:
[2026-04-28 14:53:38] 2026-04-28 12:52:54,704 | INFO     | executing command: cat /etc/os-release
[2026-04-28 14:53:38] 2026-04-28 12:52:54,895 | INFO     | cat /etc/os-release:
[2026-04-28 14:53:38] NAME="CentOS Linux"
[2026-04-28 14:53:38] VERSION="7 (Core)"
[2026-04-28 14:53:38] ID="centos"
[2026-04-28 14:53:38] ID_LIKE="rhel fedora"
[2026-04-28 14:53:38] VERSION_ID="7"
[2026-04-28 14:53:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 14:53:38] ANSI_COLOR="0;31"
[2026-04-28 14:53:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 14:53:38] HOME_URL="https://www.centos.org/"
[2026-04-28 14:53:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 14:53:38] 
[2026-04-28 14:53:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 14:53:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 14:53:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 14:53:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 14:53:38] 
[2026-04-28 14:53:38] 2026-04-28 12:52:54,895 | INFO     | ***************************************
[2026-04-28 14:53:38] 2026-04-28 12:52:55,398 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-28 14:53:38] 2026-04-28 12:52:55,658 | INFO     | sufficient remaining disk space (488990834688 B)
[2026-04-28 14:53:38] 2026-04-28 12:52:55,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 14:53:38] 2026-04-28 12:52:55,659 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 14:53:38] 2026-04-28 12:52:55,659 | INFO     | update_server=False
[2026-04-28 14:53:38] 2026-04-28 12:52:55,659 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 14:53:38] 2026-04-28 12:52:55,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 14:53:38] 2026-04-28 12:52:55,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:53:38] 2026-04-28 12:52:55,662 | INFO     | aborting loop
[2026-04-28 14:53:38] 2026-04-28 12:52:56,142 | INFO     | all job control threads have been joined
[2026-04-28 14:53:38] 2026-04-28 12:52:56,168 | INFO     | all data control threads have been joined
[2026-04-28 14:53:38] 2026-04-28 12:52:56,554 | INFO     | all payload control threads have been joined
[2026-04-28 14:53:38] 2026-04-28 12:52:56,665 | INFO     | [job] retrieve thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:56,668 | INFO     | [job] job monitor thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:56,968 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,148 | INFO     | [job] control thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,174 | INFO     | [data] control thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,253 | INFO     | [payload] failed_post thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 14:53:38] 2026-04-28 12:52:57,442 | INFO     | [data] copytool_in thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,467 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,537 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,560 | INFO     | [payload] control thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,667 | INFO     | [data] copytool_out thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:57,824 | INFO     | [job] validate thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:58,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 14:53:38] 2026-04-28 12:52:58,269 | INFO     | [payload] validate_post thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:52:58,443 | INFO     | [job] queue monitor thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:53:02,228 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:53:06,026 | INFO     | job.realtimelogging is not enabled
[2026-04-28 14:53:38] 2026-04-28 12:53:07,032 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 14:53:38] 2026-04-28 12:53:24,575 | INFO     | PID=11634 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 14:53:38] 2026-04-28 12:53:24,576 | INFO     | .. there are 2 such processes running
[2026-04-28 14:53:38] 2026-04-28 12:53:24,576 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 14:53:38] 2026-04-28 12:53:24,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 14:53:38] 2026-04-28 12:53:24,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 14:53:38] 2026-04-28 12:53:27,102 | INFO     | [monitor] cgroup control has ended
[2026-04-28 14:53:38] 2026-04-28 12:53:27,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144924661568)>', '<ExcThread(monitor, started 140144472467200)>']
[2026-04-28 14:53:38] 2026-04-28 12:53:27,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 14:53:38] 2026-04-28 12:53:27,594 | INFO     | [monitor] control thread has ended
[2026-04-28 14:53:38] 2026-04-28 12:53:32,195 | INFO     | all workflow threads have been joined
[2026-04-28 14:53:38] 2026-04-28 12:53:32,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 14:53:38] 2026-04-28 12:53:32,195 | INFO     | traces error code: 0
[2026-04-28 14:53:38] 2026-04-28 12:53:32,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 14:53:38] 2026-04-28 12:53:32,742 [wrapper] ==== pilot stdout END ====
[2026-04-28 14:53:38] 2026-04-28 12:53:32,838 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 14:53:38] 2026-04-28 12:53:32,937 [wrapper] pilotpid: 11634
[2026-04-28 14:53:38] 2026-04-28 12:53:33,045 [wrapper] Pilot exit status: 0
[2026-04-28 14:53:38] 2026-04-28 12:53:33,531 [wrapper] pandaids: 7116253968
[2026-04-28 14:53:38] 2026-04-28 12:53:34,657 [wrapper] cleanup supervisor_pilot  3786 11635
[2026-04-28 14:53:38] 2026-04-28 12:53:34,729 [wrapper] Test setup, not cleaning
[2026-04-28 14:53:38] 2026-04-28 12:53:34,828 [wrapper] apfmon messages muted
[2026-04-28 14:53:38] 2026-04-28 12:53:34,915 [wrapper] ==== wrapper stdout END ====
[2026-04-28 14:53:38] 2026-04-28 12:53:34,995 [wrapper] ==== wrapper stderr END ====
[2026-04-28 14:53:38]  *** Error codes and diagnostics ***
[2026-04-28 14:53:38]     "exeErrorCode": 0,
[2026-04-28 14:53:38]     "pilotErrorCode": 0,
[2026-04-28 14:53:38]  *** Listing of results directory ***
[2026-04-28 14:53:38] total 2452812
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc     683926 Apr 27 11:30 pilot3.tar.gz
[2026-04-28 14:53:38] -rwx------. 1 boinc boinc      36322 Apr 27 11:32 runpilot2-wrapper.sh
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc       5631 Apr 27 11:34 queuedata.json
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc        100 Apr 28 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 14:53:38] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 07:27 run_atlas
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc        105 Apr 28 07:27 job.xml
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc 2229771246 Apr 28 07:27 EVNT.49820242._000052.pool.root.1
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc      15667 Apr 28 07:27 start_atlas.sh
[2026-04-28 14:53:38] drwxrwx--x. 2 boinc boinc         68 Apr 28 07:27 shared
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc     697411 Apr 28 07:27 input.tar.gz
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc       6305 Apr 28 07:27 init_data.xml
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc          0 Apr 28 07:27 boinc_lockfile
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc       2549 Apr 28 07:28 pandaJob.out
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc        415 Apr 28 07:35 workernode_map.json
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc     994482 Apr 28 07:35 agis_schedconf.cvmfs.json
[2026-04-28 14:53:38] drwx------. 5 boinc boinc       4096 Apr 28 07:35 pilot3
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc  271807862 Apr 28 14:51 HITS.49820244._021748.pool.root.1
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc        491 Apr 28 14:51 boinc_task_state.xml
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc       1021 Apr 28 14:52 memory_monitor_summary.json
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc    1512704 Apr 28 14:52 agis_ddmendpoints.agis.ALL.json
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc     575579 Apr 28 14:52 log.49820244._021748.job.log.tgz.1
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc       6351 Apr 28 14:52 heartbeat_new.json
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc       6242 Apr 28 14:52 heartbeat.json
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc         95 Apr 28 14:52 pilot_heartbeat.json
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc       8192 Apr 28 14:53 boinc_mmap_file
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc         29 Apr 28 14:53 wrapper_checkpoint.txt
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc       4955 Apr 28 14:53 pilotlog.txt
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc    2420074 Apr 28 14:53 log.49820244._021748.job.log.1
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc        357 Apr 28 14:53 output.list
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc        410 Apr 28 14:53 runtime_log
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc    3010560 Apr 28 14:53 result.tar.gz
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc       8439 Apr 28 14:53 runtime_log.err
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc        657 Apr 28 14:53 2d482b5d22b0.diag
[2026-04-28 14:53:38] -rw-r--r--. 1 boinc boinc      20435 Apr 28 14:53 stderr.txt
[2026-04-28 14:53:38] HITS file was successfully produced:
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc 271807862 Apr 28 14:51 shared/HITS.pool.root.1
[2026-04-28 14:53:38]  *** Contents of shared directory: ***
[2026-04-28 14:53:38] total 2446592
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc 2229771246 Apr 28 07:27 ATLAS.root_0
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc      15667 Apr 28 07:27 start_atlas.sh
[2026-04-28 14:53:38] -rw-r--r--. 2 boinc boinc     697411 Apr 28 07:27 input.tar.gz
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc  271807862 Apr 28 14:51 HITS.pool.root.1
[2026-04-28 14:53:38] -rw-------. 1 boinc boinc    3010560 Apr 28 14:53 result.tar.gz
14:53:39 (7654): run_atlas exited; CPU time 105735.308674
14:53:39 (7654): called boinc_finish(0)

</stderr_txt>
]]>

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