Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:48:23 (8346): wrapper (7.7.26015): starting
04:48:23 (8346): wrapper: running run_atlas (--nthreads 8)
[2026-04-28 04:48:23] Arguments: --nthreads 8
[2026-04-28 04:48:23] Threads: 8
[2026-04-28 04:48:23] Checking for CVMFS
[2026-04-28 04:48:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-28 04:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-28 04:48:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-28 04:48:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-28 04:48:30] 2.11.2.0 24173 17898 100240 158950 0 53 24210572 25165825 96 130560 0 7258892 99.856 6041694 12076 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-28 04:48:30] CVMFS is ok
[2026-04-28 04:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 04:48:30] Checking for apptainer binary...
[2026-04-28 04:48:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-28 04:48:30] Running /usr/bin/apptainer --version
[2026-04-28 04:48:31] apptainer version 1.3.2-1.el7
[2026-04-28 04:48:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 04:48:50] cg-vwn464.simple-grid.lan
[2026-04-28 04:48:50] apptainer works
[2026-04-28 04:48:50] Set ATHENA_PROC_NUMBER=8
[2026-04-28 04:48:50] Set ATHENA_CORE_NUMBER=8
[2026-04-28 04:48:50] Starting ATLAS job with PandaID=7116253532
[2026-04-28 04:48:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 12:04:23]  *** The last 200 lines of the pilot log: ***
[2026-04-28 12:04:23] 2026-04-28 10:03:40,372 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 12:04:23] 2026-04-28 10:03:40,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 12:04:23] 2026-04-28 10:03:40,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 12:04:23] 2026-04-28 10:03:40,381 | INFO     | fitting pss+swap vs Time
[2026-04-28 12:04:23] 2026-04-28 10:03:40,382 | INFO     | sum of square deviations: 22323172040.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,388 | INFO     | sum of deviations: 320712665297.00006
[2026-04-28 12:04:23] 2026-04-28 10:03:40,388 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,388 | INFO     | mean y: 2478375.2548076925
[2026-04-28 12:04:23] 2026-04-28 10:03:40,388 | INFO     | intersect: 2478375.2548076925
[2026-04-28 12:04:23] 2026-04-28 10:03:40,389 | INFO     | chi2: 11.106867983504927
[2026-04-28 12:04:23] 2026-04-28 10:03:40,390 | INFO     | sum of square deviations: 21527882710.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,395 | INFO     | sum of deviations: 374527371658.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,395 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,395 | INFO     | mean y: 2488613.574209246
[2026-04-28 12:04:23] 2026-04-28 10:03:40,396 | INFO     | intersect: 2488613.574209246
[2026-04-28 12:04:23] 2026-04-28 10:03:40,396 | INFO     | chi2: 9.54736706001593
[2026-04-28 12:04:23] 2026-04-28 10:03:40,396 | INFO     | current chi2=9.54736706001593 (change=14.040870259780247 %)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,397 | INFO     | right removable region: 410
[2026-04-28 12:04:23] 2026-04-28 10:03:40,397 | INFO     | sum of square deviations: 21527882710.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,403 | INFO     | sum of deviations: 167770855106.99997
[2026-04-28 12:04:23] 2026-04-28 10:03:40,403 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,403 | INFO     | mean y: 2507696.9391727494
[2026-04-28 12:04:23] 2026-04-28 10:03:40,403 | INFO     | intersect: 2507696.9391727494
[2026-04-28 12:04:23] 2026-04-28 10:03:40,404 | INFO     | chi2: 5.896269185852422
[2026-04-28 12:04:23] 2026-04-28 10:03:40,404 | INFO     | current chi2=5.896269185852422 (change=46.91330450124093 %)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,405 | INFO     | sum of square deviations: 20751710017.5
[2026-04-28 12:04:23] 2026-04-28 10:03:40,410 | INFO     | sum of deviations: 40167323584.5
[2026-04-28 12:04:23] 2026-04-28 10:03:40,411 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,411 | INFO     | mean y: 2532761.3374384237
[2026-04-28 12:04:23] 2026-04-28 10:03:40,411 | INFO     | intersect: 2532761.3374384237
[2026-04-28 12:04:23] 2026-04-28 10:03:40,412 | INFO     | chi2: 2.506350042182265
[2026-04-28 12:04:23] 2026-04-28 10:03:40,412 | INFO     | current chi2=2.506350042182265 (change=57.49261162980769 %)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,412 | INFO     | sum of square deviations: 19994421400.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,418 | INFO     | sum of deviations: -10782657984.999992
[2026-04-28 12:04:23] 2026-04-28 10:03:40,418 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,418 | INFO     | mean y: 2542971.872817955
[2026-04-28 12:04:23] 2026-04-28 10:03:40,418 | INFO     | intersect: 2542971.872817955
[2026-04-28 12:04:23] 2026-04-28 10:03:40,419 | INFO     | chi2: 1.7184512843777964
[2026-04-28 12:04:23] 2026-04-28 10:03:40,419 | INFO     | current chi2=1.7184512843777964 (change=31.436102082470875 %)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,420 | INFO     | sum of square deviations: 19255784295.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,425 | INFO     | sum of deviations: -10462570001.000004
[2026-04-28 12:04:23] 2026-04-28 10:03:40,425 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,425 | INFO     | mean y: 2542894.393939394
[2026-04-28 12:04:23] 2026-04-28 10:03:40,426 | INFO     | intersect: 2542894.393939394
[2026-04-28 12:04:23] 2026-04-28 10:03:40,426 | INFO     | chi2: 1.7021124701820471
[2026-04-28 12:04:23] 2026-04-28 10:03:40,426 | INFO     | current chi2=1.7021124701820471 (change=0.9507871619220827 %)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,427 | INFO     | left removable region: 20
[2026-04-28 12:04:23] 2026-04-28 10:03:40,427 | INFO     | sum of square deviations: 18393712317.5
[2026-04-28 12:04:23] 2026-04-28 10:03:40,432 | INFO     | sum of deviations: 44443212921.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,432 | INFO     | mean x (centered): 0.0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,433 | INFO     | mean y: 2554430.2102564103
[2026-04-28 12:04:23] 2026-04-28 10:03:40,433 | INFO     | intersect: 2554430.2102564103
[2026-04-28 12:04:23] 2026-04-28 10:03:40,433 | INFO     | chi2: 0.013243654342775506
[2026-04-28 12:04:23] 2026-04-28 10:03:40,434 | INFO     | current memory leak: 2.42 B/s (using 390 data points, chi2=0.01)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,434 | INFO     | could have reported an average CPU frequency of 2250 MHz (18 samples)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | ..............................
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . Timing measurements:
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . get job = 0 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . initial setup = 118 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . payload setup = 209 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . stage-in = 0 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . payload execution = 25466 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . stage-out = 3 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,435 | INFO     | . log creation = 1 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,436 | INFO     | ..............................
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | 
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | job summary report
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | --------------------------------------------------
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | PanDA job id: 7116253532
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | task id: 49820244
[2026-04-28 12:04:23] 2026-04-28 10:03:40,552 | INFO     | errors: (none)
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | pilot state: finished 
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | transexitcode: 0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | exeerrorcode: 0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | exeerrordiag: 
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | exitcode: 0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | exitmsg: OK
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | cpuconsumptiontime: 97465 s
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | nevents: 400
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | neventsw: 0
[2026-04-28 12:04:23] 2026-04-28 10:03:40,553 | INFO     | pid: 16812
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | pgrp: 16812
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | corecount: 8
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | event service: False
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | sizes: {0: 2279969, 1: 2249576, 2: 2282484, 25680: 2318535, 25684: 2327535, 25688: 2327913}
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | --------------------------------------------------
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | 
[2026-04-28 12:04:23] 2026-04-28 10:03:40,554 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-04-28 12:04:23] 2026-04-28 10:03:41,208 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,210 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 12:04:23] 2026-04-28 10:03:41,211 | INFO     | job 7116253532 has completed (purged errors)
[2026-04-28 12:04:23] 2026-04-28 10:03:41,211 | INFO     | overall cleanup function is called
[2026-04-28 12:04:23] 2026-04-28 10:03:42,219 | INFO     | --- collectZombieJob: --- 10, [16812]
[2026-04-28 12:04:23] 2026-04-28 10:03:42,220 | INFO     | zombie collector waiting for pid 16812
[2026-04-28 12:04:23] 2026-04-28 10:03:42,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 12:04:23] 2026-04-28 10:03:42,220 | INFO     | collected zombie processes
[2026-04-28 12:04:23] 2026-04-28 10:03:42,220 | INFO     | will attempt to kill all subprocesses of pid=16812
[2026-04-28 12:04:23] 2026-04-28 10:03:42,286 | INFO     | process IDs to be killed: [16812] (in reverse order)
[2026-04-28 12:04:23] 2026-04-28 10:03:43,202 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 12:04:23] 2026-04-28 10:03:43,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 12:04:23] 2026-04-28 10:03:43,204 | INFO     | did not find any defunct processes belonging to 16812
[2026-04-28 12:04:23] 2026-04-28 10:03:43,206 | INFO     | did not find any defunct processes belonging to 16812
[2026-04-28 12:04:23] 2026-04-28 10:03:43,206 | INFO     | Ready for new job
[2026-04-28 12:04:23] 2026-04-28 10:03:43,208 | INFO     | ***************************************
[2026-04-28 12:04:23] 2026-04-28 10:03:43,209 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 12:04:23] 2026-04-28 10:03:43,209 | INFO     | ***************************************
[2026-04-28 12:04:23] 2026-04-28 10:03:43,209 | INFO     | 
[2026-04-28 12:04:23] 2026-04-28 10:03:43,209 | INFO     | pilot is running in a VM
[2026-04-28 12:04:23] 2026-04-28 10:03:43,209 | INFO     | architecture information:
[2026-04-28 12:04:23] 2026-04-28 10:03:43,211 | INFO     | executing command: cat /etc/os-release
[2026-04-28 12:04:23] 2026-04-28 10:03:43,459 | INFO     | cat /etc/os-release:
[2026-04-28 12:04:23] NAME="CentOS Linux"
[2026-04-28 12:04:23] VERSION="7 (Core)"
[2026-04-28 12:04:23] ID="centos"
[2026-04-28 12:04:23] ID_LIKE="rhel fedora"
[2026-04-28 12:04:23] VERSION_ID="7"
[2026-04-28 12:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 12:04:23] ANSI_COLOR="0;31"
[2026-04-28 12:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 12:04:23] HOME_URL="https://www.centos.org/"
[2026-04-28 12:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 12:04:23] 
[2026-04-28 12:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 12:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 12:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 12:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 12:04:23] 
[2026-04-28 12:04:23] 2026-04-28 10:03:43,459 | INFO     | ***************************************
[2026-04-28 12:04:23] 2026-04-28 10:03:43,963 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-04-28 12:04:23] 2026-04-28 10:03:44,158 | INFO     | sufficient remaining disk space (492201574400 B)
[2026-04-28 12:04:23] 2026-04-28 10:03:44,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 12:04:23] 2026-04-28 10:03:44,159 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 12:04:23] 2026-04-28 10:03:44,159 | INFO     | update_server=False
[2026-04-28 12:04:23] 2026-04-28 10:03:44,159 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 12:04:23] 2026-04-28 10:03:44,705 | INFO     | all data control threads have been joined
[2026-04-28 12:04:23] 2026-04-28 10:03:44,841 | INFO     | all job control threads have been joined
[2026-04-28 12:04:23] 2026-04-28 10:03:44,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 12:04:23] 2026-04-28 10:03:45,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:04:23] 2026-04-28 10:03:45,095 | INFO     | aborting loop
[2026-04-28 12:04:23] 2026-04-28 10:03:45,165 | INFO     | [job] retrieve thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,518 | INFO     | all payload control threads have been joined
[2026-04-28 12:04:23] 2026-04-28 10:03:45,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:04:23] 2026-04-28 10:03:45,708 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,711 | INFO     | [data] control thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,781 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,786 | INFO     | [payload] failed_post thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,848 | INFO     | [job] control thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,850 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:45,982 | INFO     | [data] copytool_in thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,101 | INFO     | [job] job monitor thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,275 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 12:04:23] 2026-04-28 10:03:46,433 | INFO     | [job] validate thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,525 | INFO     | [payload] control thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,575 | INFO     | [job] queue monitor thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,687 | INFO     | [payload] validate_post thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:46,887 | INFO     | [data] copytool_out thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:03:50,388 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 12:04:23] 2026-04-28 10:04:12,851 | INFO     | PID=12331 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 12:04:23] 2026-04-28 10:04:12,851 | INFO     | .. there are 2 such processes running
[2026-04-28 12:04:23] 2026-04-28 10:04:12,852 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 12:04:23] 2026-04-28 10:04:12,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 12:04:23] 2026-04-28 10:04:12,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 12:04:23] 2026-04-28 10:04:14,262 | INFO     | [monitor] cgroup control has ended
[2026-04-28 12:04:23] 2026-04-28 10:04:16,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643880150848)>', '<ExcThread(monitor, started 140642856462080)>']
[2026-04-28 12:04:23] 2026-04-28 10:04:16,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 12:04:23] 2026-04-28 10:04:16,876 | INFO     | [monitor] control thread has ended
[2026-04-28 12:04:23] 2026-04-28 10:04:21,352 | INFO     | all workflow threads have been joined
[2026-04-28 12:04:23] 2026-04-28 10:04:21,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 12:04:23] 2026-04-28 10:04:21,352 | INFO     | traces error code: 0
[2026-04-28 12:04:23] 2026-04-28 10:04:21,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 12:04:23] 2026-04-28 10:04:21,835 [wrapper] ==== pilot stdout END ====
[2026-04-28 12:04:23] 2026-04-28 10:04:21,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 12:04:23] 2026-04-28 10:04:22,084 [wrapper] pilotpid: 12331
[2026-04-28 12:04:23] 2026-04-28 10:04:22,178 [wrapper] Pilot exit status: 0
[2026-04-28 12:04:23] 2026-04-28 10:04:22,713 [wrapper] pandaids: 7116253532
[2026-04-28 12:04:23] 2026-04-28 10:04:23,285 [wrapper] cleanup supervisor_pilot 25626 12332
[2026-04-28 12:04:23] 2026-04-28 10:04:23,427 [wrapper] Test setup, not cleaning
[2026-04-28 12:04:23] 2026-04-28 10:04:23,521 [wrapper] apfmon messages muted
[2026-04-28 12:04:23] 2026-04-28 10:04:23,544 [wrapper] ==== wrapper stdout END ====
[2026-04-28 12:04:23] 2026-04-28 10:04:23,560 [wrapper] ==== wrapper stderr END ====
[2026-04-28 12:04:23]  *** Error codes and diagnostics ***
[2026-04-28 12:04:23]     "exeErrorCode": 0,
[2026-04-28 12:04:23]     "pilotErrorCode": 0,
[2026-04-28 12:04:23]  *** Listing of results directory ***
[2026-04-28 12:04:23] total 2452164
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc     687764 Apr 24 15:56 pilot3.tar.gz
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc       5631 Apr 27 11:32 queuedata.json
[2026-04-28 12:04:23] -rwx------. 1 boinc boinc      36322 Apr 27 11:32 runpilot2-wrapper.sh
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc        100 Apr 28 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 12:04:23] -rwxr-xr-x. 1 boinc boinc       7986 Apr 28 04:48 run_atlas
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc        105 Apr 28 04:48 job.xml
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc       6307 Apr 28 04:48 init_data.xml
[2026-04-28 12:04:23] -rw-r--r--. 2 boinc boinc 2230781997 Apr 28 04:48 EVNT.49820242._000051.pool.root.1
[2026-04-28 12:04:23] -rw-r--r--. 2 boinc boinc      15667 Apr 28 04:48 start_atlas.sh
[2026-04-28 12:04:23] drwxrwx--x. 2 boinc boinc         68 Apr 28 04:48 shared
[2026-04-28 12:04:23] -rw-r--r--. 2 boinc boinc     700373 Apr 28 04:48 input.tar.gz
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc          0 Apr 28 04:48 boinc_lockfile
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc       2549 Apr 28 04:48 pandaJob.out
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc        413 Apr 28 04:55 workernode_map.json
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc     997414 Apr 28 04:55 agis_schedconf.cvmfs.json
[2026-04-28 12:04:23] drwx------. 5 boinc boinc       4096 Apr 28 04:55 pilot3
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc  270252072 Apr 28 12:01 HITS.49820244._021389.pool.root.1
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc        489 Apr 28 12:02 boinc_task_state.xml
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc         95 Apr 28 12:03 pilot_heartbeat.json
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc       1012 Apr 28 12:03 memory_monitor_summary.json
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc    1512704 Apr 28 12:03 agis_ddmendpoints.agis.ALL.json
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc     550085 Apr 28 12:03 log.49820244._021389.job.log.tgz.1
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc       6337 Apr 28 12:03 heartbeat_new.json
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc       6228 Apr 28 12:03 heartbeat.json
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc       8192 Apr 28 12:04 boinc_mmap_file
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc         28 Apr 28 12:04 wrapper_checkpoint.txt
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc       4884 Apr 28 12:04 pilotlog.txt
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc    2378854 Apr 28 12:04 log.49820244._021389.job.log.1
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc        357 Apr 28 12:04 output.list
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc        410 Apr 28 12:04 runtime_log
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc    2949120 Apr 28 12:04 result.tar.gz
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc       8455 Apr 28 12:04 runtime_log.err
[2026-04-28 12:04:23] -rw-------. 1 boinc boinc        656 Apr 28 12:04 2d3780202a05.diag
[2026-04-28 12:04:23] -rw-r--r--. 1 boinc boinc      20453 Apr 28 12:04 stderr.txt
[2026-04-28 12:04:24] HITS file was successfully produced:
[2026-04-28 12:04:24] -rw-------. 1 boinc boinc 270252072 Apr 28 12:01 shared/HITS.pool.root.1
[2026-04-28 12:04:24]  *** Contents of shared directory: ***
[2026-04-28 12:04:24] total 2446000
[2026-04-28 12:04:24] -rw-r--r--. 2 boinc boinc 2230781997 Apr 28 04:48 ATLAS.root_0
[2026-04-28 12:04:24] -rw-r--r--. 2 boinc boinc      15667 Apr 28 04:48 start_atlas.sh
[2026-04-28 12:04:24] -rw-r--r--. 2 boinc boinc     700373 Apr 28 04:48 input.tar.gz
[2026-04-28 12:04:24] -rw-------. 1 boinc boinc  270252072 Apr 28 12:01 HITS.pool.root.1
[2026-04-28 12:04:24] -rw-------. 1 boinc boinc    2949120 Apr 28 12:04 result.tar.gz
12:04:25 (8346): run_atlas exited; CPU time 97712.429498
12:04:25 (8346): called boinc_finish(0)

</stderr_txt>
]]>

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