Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 06:28:48 (17860): vboxwrapper version 26210
2026-04-27 06:28:48 (17860): BOINC client version: 8.2.4
2026-04-27 06:28:49 (17860): Detected: VirtualBox VboxManage Interface (Version: 6.1.30)
2026-04-27 06:28:49 (17860): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 06:28:49 (17860): Create VM. (boinc_6382d3a9248a3cd6, slot#3)
2026-04-27 06:28:50 (17860): Setting Memory Size for VM. (4400MB)
2026-04-27 06:28:50 (17860): Setting CPU Count for VM. (4)
2026-04-27 06:28:51 (17860): Setting Chipset Options for VM.
2026-04-27 06:28:51 (17860): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 06:28:51 (17860): Setting Boot Options for VM.
2026-04-27 06:28:52 (17860): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 06:28:52 (17860): Enabling VM Network Access.
2026-04-27 06:28:52 (17860): Disabling USB Support for VM.
2026-04-27 06:28:53 (17860): Disabling COM Port Support for VM.
2026-04-27 06:28:53 (17860): Disabling LPT Port Support for VM.
2026-04-27 06:28:53 (17860): Disabling Audio Support for VM.
2026-04-27 06:28:54 (17860): Disabling Clipboard Support for VM.
2026-04-27 06:28:55 (17860): Disabling Drag and Drop Support for VM.
2026-04-27 06:28:55 (17860): Adding storage controller(s) to VM.
2026-04-27 06:28:55 (17860): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 06:28:56 (17860): Adding VirtualBox Guest Additions to VM.
2026-04-27 06:28:57 (17860): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 06:28:57 (17860): forwarding host port 51627 to guest port 80
2026-04-27 06:28:57 (17860): Enabling remote desktop for VM.
2026-04-27 06:28:58 (17860): Enabling shared directory for VM.
2026-04-27 06:28:58 (17860): Starting VM using VBoxManage interface. (boinc_6382d3a9248a3cd6, slot#3)
2026-04-27 06:29:05 (17860): Successfully started VM. (PID = '18204')
2026-04-27 06:29:05 (17860): Reporting VM Process ID to BOINC.
2026-04-27 06:29:05 (17860): Guest Log: BIOS: VirtualBox 6.1.30
2026-04-27 06:29:05 (17860): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 06:29:05 (17860): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 06:29:05 (17860): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 06:29:05 (17860): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 06:29:05 (17860): Detected: Web Application Enabled (http://localhost:51627)
2026-04-27 06:29:05 (17860): Detected: Remote Desktop Enabled (localhost:51628)
2026-04-27 06:29:05 (17860): Preference change detected
2026-04-27 06:29:05 (17860): Setting CPU throttle for VM. (100%)
2026-04-27 06:29:05 (17860): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 06:29:12 (17860): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 06:29:12 (17860): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 06:29:12 (17860): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 06:29:12 (17860): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 06:29:12 (17860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 06:29:25 (17860): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 06:29:25 (17860): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-27 06:29:47 (17860): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000237 main     Log opened 2026-04-27T06:29:45.400129000Z
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000346 main     OS Product: Linux
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000388 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000424 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000460 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000462 main     Process ID: 1306
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.000463 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 06:29:47 (17860): Guest Log: 00:00:00.001455 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 06:29:48 (17860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 06:29:48 (17860): Guest Log: [INFO] Mounting shared directory
2026-04-27 06:29:48 (17860): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 06:29:57 (17860): Guest Log: 00:00:10.004633 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 814 832 000ns (GuestNow=1 777 296 597 218 156 000 ns GuestLast=1 777 271 385 403 324 000 ns fSetTimeLastLoop=true )
2026-04-27 06:30:50 (17860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 06:30:50 (17860): Guest Log: [INFO] Detected branch: prod
2026-04-27 06:30:50 (17860): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 06:30:50 (17860): Guest Log: Copying input files
2026-04-27 06:33:00 (17860): Guest Log: Copied input files into RunAtlas.
2026-04-27 06:33:00 (17860): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-27 06:33:00 (17860): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-27 06:33:00 (17860): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-27 06:33:00 (17860): Guest Log: Further information can be found at the LHC@home message board.
2026-04-27 06:33:52 (17860): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 06:33:53 (17860): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 06:33:53 (17860): Guest Log: 2.6.3.0 1608 3 32192 158928 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-27 06:33:59 (17860): Guest Log: copied the webapp to /var/www
2026-04-27 06:33:59 (17860): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-27 06:33:59 (17860): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-27 06:33:59 (17860): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 06:33:59 (17860): Guest Log:  *** Starting ATLAS job. (PandaID=7116252616 taskID=49820244) ***
2026-04-27 08:11:05 (17860): Status Report: Elapsed Time: '6000.710951'
2026-04-27 08:11:05 (17860): Status Report: CPU Time: '17996.343750'
2026-04-27 09:54:58 (17860): Status Report: Elapsed Time: '12001.169703'
2026-04-27 09:54:58 (17860): Status Report: CPU Time: '42083.109375'
2026-04-27 11:38:19 (17860): Status Report: Elapsed Time: '18001.766958'
2026-04-27 11:38:19 (17860): Status Report: CPU Time: '65658.515625'
2026-04-27 13:22:35 (17860): Status Report: Elapsed Time: '24002.589600'
2026-04-27 13:22:35 (17860): Status Report: CPU Time: '89819.187500'
2026-04-27 15:06:35 (17860): Status Report: Elapsed Time: '30002.835608'
2026-04-27 15:06:35 (17860): Status Report: CPU Time: '112956.421875'
2026-04-27 15:58:03 (17860): Guest Log:  *** Job finished ***
2026-04-27 15:58:03 (17860): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:57:57,983 | INFO     | all workflow threads have been joined
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:57:57,984 | INFO     | end of generic workflow (traces error code: 0)
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:57:57,985 | INFO     | traces error code: 0
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:57:57,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,412 | INFO     | PID=6069 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,414 | INFO     | found 0 job(s) in 20 queues
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,415 | INFO     | [monitor] control thread has ended
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,659 [wrapper] ==== pilot stdout END ====
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,669 [wrapper] ==== wrapper stdout RESUME ====
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,682 [wrapper] pilotpid: 6069
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:00,696 [wrapper] Pilot exit status: 0
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,324 [wrapper] pandaids: 7116252616
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,399 [wrapper] cleanup supervisor_pilot  3085 6070
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,409 [wrapper] Test setup, not cleaning
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,417 [wrapper] apfmon messages muted
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,439 [wrapper] ==== wrapper stdout END ====
2026-04-27 15:58:03 (17860): Guest Log: 2026-04-27 22:58:01,446 [wrapper] ==== wrapper stderr END ====
2026-04-27 15:58:03 (17860): Guest Log:  *** Error codes and diagnostics ***
2026-04-27 15:58:03 (17860): Guest Log:     "exeErrorCode": 0,
2026-04-27 15:58:03 (17860): Guest Log:     "pilotErrorCode": 0,
2026-04-27 15:58:03 (17860): Guest Log:  *** Listing of results directory ***
2026-04-27 15:58:03 (17860): Guest Log: total 274724
2026-04-27 15:58:03 (17860): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 27 09:30 pilot3.tar.gz
2026-04-27 15:58:03 (17860): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 27 09:31 runpilot2-wrapper.sh
2026-04-27 15:58:03 (17860): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 27 09:32 queuedata.json
2026-04-27 15:58:03 (17860): Guest Log: -rwxr-xr-x. 1 atlas atlas      8940 Apr 27 13:32 init_data.xml
2026-04-27 15:58:03 (17860): Guest Log: -rwxr-xr-x. 1 atlas atlas    697408 Apr 27 13:32 input.tar.gz
2026-04-27 15:58:03 (17860): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 27 13:32 start_atlas.sh
2026-04-27 15:58:03 (17860): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 27 13:32 EVNT.49820242._000047.pool.root.1 -> /data/./ATLAS.root_0
2026-04-27 15:58:03 (17860): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 27 13:33 pandaJob.out
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas    996913 Apr 27 13:36 agis_schedconf.cvmfs.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas       426 Apr 27 13:36 workernode_map.json
2026-04-27 15:58:03 (17860): Guest Log: drwx------. 5 atlas atlas      4096 Apr 27 13:37 pilot3
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas 269992925 Apr 27 22:55 HITS.49820244._020809.pool.root.1
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 27 22:57 memory_monitor_summary.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 27 22:57 agis_ddmendpoints.agis.ALL.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas    619310 Apr 27 22:57 log.49820244._020809.job.log.tgz.1
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas      6389 Apr 27 22:57 heartbeat_new.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas      6280 Apr 27 22:57 heartbeat.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 22:58 pilot_heartbeat.json
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas       744 Apr 27 22:58 pilotlog.txt
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas   3012664 Apr 27 22:58 log.49820244._020809.job.log.1
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 22:58 output.list
2026-04-27 15:58:03 (17860): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 27 22:58 runtime_log
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas   3645440 Apr 27 22:58 result.tar.gz
2026-04-27 15:58:03 (17860): Guest Log: -rw-r--r--. 1 atlas atlas      8369 Apr 27 22:58 runtime_log.err
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas       657 Apr 27 22:58 2d0005985f65.diag
2026-04-27 15:58:03 (17860): Guest Log: Looking for outputfile HITS.49820244._020809.pool.root.1
2026-04-27 15:58:03 (17860): Guest Log: HITS file was successfully produced
2026-04-27 15:58:03 (17860): Guest Log: -rw-------. 1 atlas atlas 269992925 Apr 27 22:55 /home/atlas/RunAtlas/HITS.49820244._020809.pool.root.1
2026-04-27 15:58:15 (17860): Guest Log: Successfully finished the ATLAS job!
2026-04-27 15:58:15 (17860): Guest Log: Copying the results back to the shared directory!
2026-04-27 15:58:15 (17860): Guest Log:  *** Contents of shared directory: ***
2026-04-27 15:58:16 (17860): Guest Log: total 2438756
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root 2222915413 Apr 27 13:28 ATLAS.root_0
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root  269992925 Apr 27 22:58 HITS.pool.root.1
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root       8940 Apr 27 13:28 init_data.xml
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root     697408 Apr 27 13:24 input.tar.gz
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root    3645440 Apr 27 22:58 result.tar.gz
2026-04-27 15:58:16 (17860): Guest Log: -rwxrwxrwx. 1 root root      15667 Apr 27 13:24 start_atlas.sh
2026-04-27 15:58:16 (17860): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-27 15:58:16 (17860): VM Completion File Detected.
2026-04-27 15:58:16 (17860): Powering off VM.
2026-04-27 15:58:18 (17860): Successfully stopped VM.
2026-04-27 15:58:18 (17860): Deregistering VM. (boinc_6382d3a9248a3cd6, slot#3)
2026-04-27 15:58:18 (17860): Removing network bandwidth throttle group from VM.
2026-04-27 15:58:18 (17860): Removing VM from VirtualBox.
2026-04-27 15:58:24 (17860): called boinc_finish(0)

</stderr_txt>
]]>

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