Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 22:45:23 (4308): vboxwrapper version 26210
2026-04-27 22:45:23 (4308): BOINC client version: 8.2.9
2026-04-27 22:45:24 (4308): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2026-04-27 22:45:24 (4308): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 22:45:25 (4308): Create VM. (boinc_9b08ea90089e6c7c, slot#1)
2026-04-27 22:45:25 (4308): Setting Memory Size for VM. (4400MB)
2026-04-27 22:45:25 (4308): Setting CPU Count for VM. (4)
2026-04-27 22:45:26 (4308): Setting Chipset Options for VM.
2026-04-27 22:45:26 (4308): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 22:45:26 (4308): Setting Boot Options for VM.
2026-04-27 22:45:27 (4308): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 22:45:27 (4308): Enabling VM Network Access.
2026-04-27 22:45:27 (4308): Disabling USB Support for VM.
2026-04-27 22:45:28 (4308): Disabling COM Port Support for VM.
2026-04-27 22:45:28 (4308): Disabling LPT Port Support for VM.
2026-04-27 22:45:28 (4308): Disabling Audio Support for VM.
2026-04-27 22:45:28 (4308): Disabling Clipboard Support for VM.
2026-04-27 22:45:29 (4308): Disabling Drag and Drop Support for VM.
2026-04-27 22:45:29 (4308): Adding storage controller(s) to VM.
2026-04-27 22:45:29 (4308): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 22:45:31 (4308): Adding VirtualBox Guest Additions to VM.
2026-04-27 22:45:32 (4308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 22:45:32 (4308): forwarding host port 61779 to guest port 80
2026-04-27 22:45:32 (4308): Enabling remote desktop for VM.
2026-04-27 22:45:32 (4308): Required extension pack not installed, remote desktop not enabled.
2026-04-27 22:45:32 (4308): Enabling shared directory for VM.
2026-04-27 22:45:33 (4308): Starting VM using VBoxManage interface. (boinc_9b08ea90089e6c7c, slot#1)
2026-04-27 22:45:44 (4308): Successfully started VM. (PID = '18068')
2026-04-27 22:45:44 (4308): Reporting VM Process ID to BOINC.
2026-04-27 22:45:44 (4308): Guest Log: BIOS: VirtualBox 7.0.18
2026-04-27 22:45:44 (4308): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 22:45:44 (4308): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 22:45:44 (4308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 22:45:44 (4308): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 22:45:44 (4308): Detected: Web Application Enabled (http://localhost:61779)
2026-04-27 22:45:44 (4308): Preference change detected
2026-04-27 22:45:44 (4308): Setting CPU throttle for VM. (100%)
2026-04-27 22:45:44 (4308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 22:45:46 (4308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 22:45:46 (4308): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 22:45:50 (4308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 22:45:50 (4308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 22:45:50 (4308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 22:46:00 (4308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 22:46:00 (4308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-27 22:46:17 (4308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.000362 main     Log opened 2026-04-27T22:46:15.520154000Z
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.000673 main     OS Product: Linux
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.000805 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.000892 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.001049 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.001052 main     Process ID: 1310
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.001054 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 22:46:17 (4308): Guest Log: 00:00:00.004314 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 22:46:17 (4308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 22:46:17 (4308): Guest Log: [INFO] Mounting shared directory
2026-04-27 22:46:17 (4308): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 22:46:27 (4308): Guest Log: 00:00:10.091082 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 327 976 000ns (GuestNow=1 777 344 386 856 892 000 ns GuestLast=1 777 329 975 528 916 000 ns fSetTimeLastLoop=true )
2026-04-27 22:47:17 (4308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 22:47:17 (4308): Guest Log: [INFO] Detected branch: prod
2026-04-27 22:47:17 (4308): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 22:47:17 (4308): Guest Log: Copying input files
2026-04-27 22:47:55 (4308): Guest Log: Copied input files into RunAtlas.
2026-04-27 22:47:55 (4308): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-27 22:47:55 (4308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-27 22:47:56 (4308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-27 22:47:56 (4308): Guest Log: Further information can be found at the LHC@home message board.
2026-04-27 22:48:53 (4308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 22:48:53 (4308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 22:48:53 (4308): Guest Log: 2.6.3.0 1612 1 32156 158950 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-27 22:48:55 (4308): Guest Log: copied the webapp to /var/www
2026-04-27 22:48:55 (4308): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-27 22:48:55 (4308): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-27 22:48:55 (4308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 22:48:55 (4308): Guest Log:  *** Starting ATLAS job. (PandaID=7116252717 taskID=49820244) ***
2026-04-28 00:30:13 (4308): Status Report: Elapsed Time: '6000.776056'
2026-04-28 00:30:13 (4308): Status Report: CPU Time: '19607.343750'
2026-04-28 02:17:19 (4308): Status Report: Elapsed Time: '12001.385380'
2026-04-28 02:17:19 (4308): Status Report: CPU Time: '43934.687500'
2026-04-28 04:05:13 (4308): Status Report: Elapsed Time: '18001.473919'
2026-04-28 04:05:13 (4308): Status Report: CPU Time: '68402.421875'
2026-04-28 05:53:31 (4308): Status Report: Elapsed Time: '24001.954517'
2026-04-28 05:53:31 (4308): Status Report: CPU Time: '93009.078125'
2026-04-28 07:42:17 (4308): Status Report: Elapsed Time: '30002.581656'
2026-04-28 07:42:17 (4308): Status Report: CPU Time: '117706.484375'
2026-04-28 09:29:08 (4308): Status Report: Elapsed Time: '36002.835142'
2026-04-28 09:29:13 (4308): Status Report: CPU Time: '141893.234375'
2026-04-28 11:15:42 (4308): Status Report: Elapsed Time: '42003.537891'
2026-04-28 11:15:42 (4308): Status Report: CPU Time: '166313.859375'
2026-04-28 13:02:19 (4308): Status Report: Elapsed Time: '48003.554436'
2026-04-28 13:02:19 (4308): Status Report: CPU Time: '190639.843750'
2026-04-28 14:49:15 (4308): Status Report: Elapsed Time: '54003.767763'
2026-04-28 14:49:15 (4308): Status Report: CPU Time: '214906.109375'
2026-04-28 16:36:08 (4308): Status Report: Elapsed Time: '60004.586321'
2026-04-28 16:36:08 (4308): Status Report: CPU Time: '239013.578125'
2026-04-28 17:56:03 (4308): Guest Log:  *** Job finished ***
2026-04-28 17:56:03 (4308): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:55:45,187 | INFO     | all workflow threads have been joined
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:55:45,187 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:55:45,188 | INFO     | traces error code: 0
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:55:45,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,210 | INFO     | PID=6031 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,211 | INFO     | found 0 job(s) in 20 queues
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,212 | INFO     | [monitor] control thread has ended
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,452 [wrapper] ==== pilot stdout END ====
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,469 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,487 [wrapper] pilotpid: 6031
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,503 [wrapper] Pilot exit status: 0
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,753 [wrapper] pandaids: 7116252717
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,877 [wrapper] cleanup supervisor_pilot 15011 6032
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,912 [wrapper] Test setup, not cleaning
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,926 [wrapper] apfmon messages muted
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,940 [wrapper] ==== wrapper stdout END ====
2026-04-28 17:56:03 (4308): Guest Log: 2026-04-28 21:56:01,955 [wrapper] ==== wrapper stderr END ====
2026-04-28 17:56:03 (4308): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 17:56:03 (4308): Guest Log:     "exeErrorCode": 0,
2026-04-28 17:56:03 (4308): Guest Log:     "pilotErrorCode": 0,
2026-04-28 17:56:03 (4308): Guest Log:  *** Listing of results directory ***
2026-04-28 17:56:03 (4308): Guest Log: total 280096
2026-04-28 17:56:03 (4308): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 27 09:30 queuedata.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 27 09:30 pilot3.tar.gz
2026-04-28 17:56:03 (4308): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 27 09:31 runpilot2-wrapper.sh
2026-04-28 17:56:03 (4308): Guest Log: -rwxr-xr-x. 1 atlas atlas      5841 Apr 28 02:47 init_data.xml
2026-04-28 17:56:03 (4308): Guest Log: -rwxr-xr-x. 1 atlas atlas    697406 Apr 28 02:47 input.tar.gz
2026-04-28 17:56:03 (4308): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 02:47 start_atlas.sh
2026-04-28 17:56:03 (4308): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 02:47 EVNT.49820242._000047.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 17:56:03 (4308): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 28 02:48 pandaJob.out
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas    997414 Apr 28 02:50 agis_schedconf.cvmfs.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas       427 Apr 28 02:50 workernode_map.json
2026-04-28 17:56:03 (4308): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 02:50 pilot3
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas 269187164 Apr 28 21:53 HITS.49820244._020910.pool.root.1
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 28 21:55 memory_monitor_summary.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 21:55 agis_ddmendpoints.agis.ALL.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 21:55 pilot_heartbeat.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas    836572 Apr 28 21:55 log.49820244._020910.job.log.tgz.1
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas      6411 Apr 28 21:55 heartbeat_new.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas      6302 Apr 28 21:55 heartbeat.json
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas       745 Apr 28 21:56 pilotlog.txt
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas   5949903 Apr 28 21:56 log.49820244._020910.job.log.1
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 21:56 output.list
2026-04-28 17:56:03 (4308): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 21:56 runtime_log
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas   6799360 Apr 28 21:56 result.tar.gz
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas       656 Apr 28 21:56 2d00911465aa.diag
2026-04-28 17:56:03 (4308): Guest Log: -rw-r--r--. 1 atlas atlas      8363 Apr 28 21:56 runtime_log.err
2026-04-28 17:56:03 (4308): Guest Log: Looking for outputfile HITS.49820244._020910.pool.root.1
2026-04-28 17:56:03 (4308): Guest Log: HITS file was successfully produced
2026-04-28 17:56:03 (4308): Guest Log: -rw-------. 1 atlas atlas 269187164 Apr 28 21:53 /home/atlas/RunAtlas/HITS.49820244._020910.pool.root.1
2026-04-28 17:56:08 (4308): Guest Log: Successfully finished the ATLAS job!
2026-04-28 17:56:08 (4308): Guest Log: Copying the results back to the shared directory!
2026-04-28 17:56:08 (4308): Guest Log:  *** Contents of shared directory: ***
2026-04-28 17:56:08 (4308): Guest Log: total 2441044
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root 2222915413 Apr 28 02:45 ATLAS.root_0
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root  269187164 Apr 28 21:56 HITS.pool.root.1
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root       5841 Apr 28 02:45 init_data.xml
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root     697406 Apr 27 12:45 input.tar.gz
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root    6799360 Apr 28 21:56 result.tar.gz
2026-04-28 17:56:08 (4308): Guest Log: -rwxrwxrwx. 1 root root      15667 Apr 27 12:45 start_atlas.sh
2026-04-28 17:56:08 (4308): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 17:56:08 (4308): VM Completion File Detected.
2026-04-28 17:56:08 (4308): Powering off VM.
2026-04-28 17:56:09 (4308): Successfully stopped VM.
2026-04-28 17:56:09 (4308): Deregistering VM. (boinc_9b08ea90089e6c7c, slot#1)
2026-04-28 17:56:09 (4308): Removing network bandwidth throttle group from VM.
2026-04-28 17:56:09 (4308): Removing VM from VirtualBox.
2026-04-28 17:56:15 (4308): called boinc_finish(0)

</stderr_txt>
]]>

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