Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:30 (2889027): wrapper (7.7.26015): starting
05:32:30 (2889027): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 05:32:30] Arguments: --nthreads 8
[2026-04-27 05:32:30] Threads: 8
[2026-04-27 05:32:30] Checking for CVMFS
[2026-04-27 05:32:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 05:32:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 05:32:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 05:32:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 05:32:31] 2.13.3.0 12357 248707 237344 158922 3 460 22488720 32503808 31790 16776704 1 3421066841 99.664 2956208399 44552 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-27 05:32:31] CVMFS is ok
[2026-04-27 05:32:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 05:32:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 05:32:31] Further information can be found at the LHC@home message board.
[2026-04-27 05:32:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 05:32:31] Checking for apptainer binary...
[2026-04-27 05:32:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 05:32:31] Running /usr/bin/apptainer --version
[2026-04-27 05:32:32] apptainer version 1.4.5-2.el9
[2026-04-27 05:32:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 05:32:33] c8-7-2.aglt2.org
[2026-04-27 05:32:33] apptainer works
[2026-04-27 05:32:33] Set ATHENA_PROC_NUMBER=8
[2026-04-27 05:32:33] Set ATHENA_CORE_NUMBER=8
[2026-04-27 05:32:33] Starting ATLAS job with PandaID=7116216367
[2026-04-27 05:32:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 07:29:14]  *** The last 200 lines of the pilot log: ***
[2026-04-27 07:29:14] 2026-04-27 11:28:11,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 07:29:14] 2026-04-27 11:28:11,152 | INFO     | fitting pss+swap vs Time
[2026-04-27 07:29:14] 2026-04-27 11:28:11,152 | INFO     | sum of square deviations: 424040280.9909904
[2026-04-27 07:29:14] 2026-04-27 11:28:11,153 | INFO     | sum of deviations: 19021539331.06304
[2026-04-27 07:29:14] 2026-04-27 11:28:11,153 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,153 | INFO     | mean y: 2499562.936936937
[2026-04-27 07:29:14] 2026-04-27 11:28:11,165 | INFO     | intersect: 2499562.936936937
[2026-04-27 07:29:14] 2026-04-27 11:28:11,165 | INFO     | chi2: 1.9548338102199643
[2026-04-27 07:29:14] 2026-04-27 11:28:11,165 | INFO     | sum of square deviations: 369276768.4905652
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | sum of deviations: 18127661913.188675
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | mean y: 2497071.8113207547
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | intersect: 2497071.8113207547
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | chi2: 1.9590583724565358
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | current chi2=1.9590583724565358 (change=-0.21610851083531066 %)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | right removable region: 105
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | sum of square deviations: 369276158.4905652
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | sum of deviations: -1777741629.6792452
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | mean y: 2556477.679245283
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | intersect: 2556477.679245283
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | chi2: 0.030455119050837236
[2026-04-27 07:29:14] 2026-04-27 11:28:11,166 | INFO     | current chi2=0.030455119050837236 (change=98.44206096233773 %)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | sum of square deviations: 319442360.9900984
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | sum of deviations: -3129949708.8613863
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | mean y: 2560476.8613861385
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | intersect: 2560476.8613861385
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | chi2: 0.009329961066377
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | current chi2=0.009329961066377 (change=69.36488394347448 %)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | sum of square deviations: 274306325.98958343
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | sum of deviations: -2777920528.364582
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | mean y: 2559276.8645833335
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | intersect: 2559276.8645833335
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | chi2: 0.009238486604964916
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | current chi2=0.009238486604964916 (change=0.9804377613293327 %)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,167 | INFO     | left removable region: 15
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | sum of square deviations: 226017414.4888887
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | sum of deviations: -2657397490.2000003
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | mean x (centered): 0.0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | mean y: 2559733.7
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | intersect: 2559733.7
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | chi2: 0.00872276714711693
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | current memory leak: -11.76 B/s (using 90 data points, chi2=0.01)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | ..............................
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | . Timing measurements:
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | . get job = 0 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,168 | INFO     | . initial setup = 23 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | . payload setup = 48 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | . stage-in = 0 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | . payload execution = 6785 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | . stage-out = 2 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | . log creation = 0 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,169 | INFO     | ..............................
[2026-04-27 07:29:14] 2026-04-27 11:28:11,382 | WARNING  | process 2933747 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 07:29:14] 2026-04-27 11:28:11,408 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7116216367/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,409 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7116216367/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,409 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-27 07:29:14] 2026-04-27 11:28:11,409 | WARNING  | maxPSS not found in memory monitor output
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | 
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | job summary report
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | --------------------------------------------------
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | PanDA job id: 7116216367
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | task id: 49820244
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | errors: (none)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | pilot state: finished 
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | transexitcode: 0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | exeerrorcode: 0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | exeerrordiag: 
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | exitcode: 0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | exitmsg: OK
[2026-04-27 07:29:14] 2026-04-27 11:28:11,463 | INFO     | cpuconsumptiontime: 40114 s
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | nevents: 400
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | neventsw: 0
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | pid: 2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | pgrp: 2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | corecount: 8
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | event service: False
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | sizes: {0: 2273969, 1: 2276455, 12: 2276455, 6837: 2303758, 6841: 2312812, 6844: 2312950}
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | --------------------------------------------------
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | 
[2026-04-27 07:29:14] 2026-04-27 11:28:11,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-04-27 07:29:14] 2026-04-27 11:28:11,569 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,569 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,569 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,570 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 07:29:14] 2026-04-27 11:28:11,572 | INFO     | job 7116216367 has completed (purged errors)
[2026-04-27 07:29:14] 2026-04-27 11:28:11,572 | INFO     | overall cleanup function is called
[2026-04-27 07:29:14] 2026-04-27 11:28:11,849 | INFO     | number of running child processes to parent process 2933747: 1
[2026-04-27 07:29:14] 2026-04-27 11:28:11,849 | INFO     | maximum number of monitored processes: 6
[2026-04-27 07:29:14] 2026-04-27 11:28:11,849 | INFO     | aborting job monitoring since job object (job id=7116216367) has expired
[2026-04-27 07:29:14] 2026-04-27 11:28:12,589 | INFO     | --- collectZombieJob: --- 10, [2933747]
[2026-04-27 07:29:14] 2026-04-27 11:28:12,589 | INFO     | zombie collector waiting for pid 2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:12,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 07:29:14] 2026-04-27 11:28:12,589 | INFO     | collected zombie processes
[2026-04-27 07:29:14] 2026-04-27 11:28:12,589 | INFO     | will attempt to kill all subprocesses of pid=2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:12,992 | INFO     | process IDs to be killed: [2933747] (in reverse order)
[2026-04-27 07:29:14] 2026-04-27 11:28:13,166 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 07:29:14] 2026-04-27 11:28:13,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 07:29:14] 2026-04-27 11:28:13,210 | INFO     | did not find any defunct processes belonging to 2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:13,258 | INFO     | did not find any defunct processes belonging to 2933747
[2026-04-27 07:29:14] 2026-04-27 11:28:13,258 | INFO     | Ready for new job
[2026-04-27 07:29:14] 2026-04-27 11:28:13,260 | INFO     | ***************************************
[2026-04-27 07:29:14] 2026-04-27 11:28:13,260 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 07:29:14] 2026-04-27 11:28:13,260 | INFO     | ***************************************
[2026-04-27 07:29:14] 2026-04-27 11:28:13,260 | INFO     | 
[2026-04-27 07:29:14] 2026-04-27 11:28:13,267 | INFO     | architecture information:
[2026-04-27 07:29:14] 2026-04-27 11:28:13,271 | INFO     | executing command: cat /etc/os-release
[2026-04-27 07:29:14] 2026-04-27 11:28:13,332 | INFO     | cat /etc/os-release:
[2026-04-27 07:29:14] NAME="CentOS Linux"
[2026-04-27 07:29:14] VERSION="7 (Core)"
[2026-04-27 07:29:14] ID="centos"
[2026-04-27 07:29:14] ID_LIKE="rhel fedora"
[2026-04-27 07:29:14] VERSION_ID="7"
[2026-04-27 07:29:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 07:29:14] ANSI_COLOR="0;31"
[2026-04-27 07:29:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 07:29:14] HOME_URL="https://www.centos.org/"
[2026-04-27 07:29:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 07:29:14] 
[2026-04-27 07:29:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 07:29:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 07:29:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 07:29:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 07:29:14] 
[2026-04-27 07:29:14] 2026-04-27 11:28:13,332 | INFO     | ***************************************
[2026-04-27 07:29:14] 2026-04-27 11:28:13,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-04-27 07:29:14] 2026-04-27 11:28:13,996 | INFO     | sufficient remaining disk space (42285924352 B)
[2026-04-27 07:29:14] 2026-04-27 11:28:13,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 07:29:14] 2026-04-27 11:28:13,996 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 07:29:14] 2026-04-27 11:28:13,996 | INFO     | update_server=False
[2026-04-27 07:29:14] 2026-04-27 11:28:13,996 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 07:29:14] 2026-04-27 11:28:14,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 07:29:14] 2026-04-27 11:28:14,374 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 07:29:14] 2026-04-27 11:28:14,374 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 07:29:14] 2026-04-27 11:28:14,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:29:14] 2026-04-27 11:28:14,374 | INFO     | will abort loop
[2026-04-27 07:29:14] 2026-04-27 11:28:14,632 | INFO     | all data control threads have been joined
[2026-04-27 07:29:14] 2026-04-27 11:28:14,764 | INFO     | all job control threads have been joined
[2026-04-27 07:29:14] 2026-04-27 11:28:14,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 07:29:14] 2026-04-27 11:28:15,011 | INFO     | [job] retrieve thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,223 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,281 | INFO     | all payload control threads have been joined
[2026-04-27 07:29:14] 2026-04-27 11:28:15,284 | INFO     | [data] copytool_in thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,393 | INFO     | [job] job monitor thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,611 | INFO     | [payload] validate_post thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,638 | INFO     | [data] control thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,749 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:15,770 | INFO     | [job] control thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,024 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,159 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,229 | INFO     | [job] validate thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,267 | INFO     | [data] copytool_out thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,287 | INFO     | [payload] control thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,335 | INFO     | [payload] failed_post thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:16,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:29:14] 2026-04-27 11:28:17,511 | INFO     | [job] queue monitor thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:18,819 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 07:29:14] 2026-04-27 11:28:45,451 | INFO     | PID=2910090 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 07:29:14] 2026-04-27 11:28:45,451 | INFO     | .. there are 17 such processes running
[2026-04-27 07:29:14] 2026-04-27 11:28:45,452 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 07:29:14] 2026-04-27 11:28:45,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 07:29:14] 2026-04-27 11:28:45,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 07:29:14] 2026-04-27 11:29:07,426 | INFO     | [monitor] cgroup control has ended
[2026-04-27 07:29:14] 2026-04-27 11:29:08,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785312331584)>', '<ExcThread(monitor, started 139784970282752)>']
[2026-04-27 07:29:14] 2026-04-27 11:29:08,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 07:29:14] 2026-04-27 11:29:08,590 | INFO     | [monitor] control thread has ended
[2026-04-27 07:29:14] 2026-04-27 11:29:13,216 | INFO     | all workflow threads have been joined
[2026-04-27 07:29:14] 2026-04-27 11:29:13,216 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 07:29:14] 2026-04-27 11:29:13,216 | INFO     | traces error code: 0
[2026-04-27 07:29:14] 2026-04-27 11:29:13,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 07:29:14] 2026-04-27 11:29:13,530 [wrapper] ==== pilot stdout END ====
[2026-04-27 07:29:14] 2026-04-27 11:29:13,558 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 07:29:14] 2026-04-27 11:29:13,609 [wrapper] pilotpid: 2910090
[2026-04-27 07:29:14] 2026-04-27 11:29:13,644 [wrapper] Pilot exit status: 0
[2026-04-27 07:29:14] 2026-04-27 11:29:13,761 [wrapper] pandaids: 7116216367
[2026-04-27 07:29:14] 2026-04-27 11:29:14,025 [wrapper] cleanup supervisor_pilot  416633 2910091
[2026-04-27 07:29:14] 2026-04-27 11:29:14,029 [wrapper] Test setup, not cleaning
[2026-04-27 07:29:14] 2026-04-27 11:29:14,031 [wrapper] apfmon messages muted
[2026-04-27 07:29:14] 2026-04-27 11:29:14,037 [wrapper] ==== wrapper stdout END ====
[2026-04-27 07:29:14] 2026-04-27 11:29:14,078 [wrapper] ==== wrapper stderr END ====
[2026-04-27 07:29:14]  *** Error codes and diagnostics ***
[2026-04-27 07:29:14]     "exeErrorCode": 0,
[2026-04-27 07:29:14]     "pilotErrorCode": 0,
[2026-04-27 07:29:14]  *** Listing of results directory ***
[2026-04-27 07:29:14] total 2443892
[2026-04-27 07:29:14] -rwx------. 1 boincer umatlas      36322 Apr 26 22:46 runpilot2-wrapper.sh
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas       5631 Apr 26 22:48 queuedata.json
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas     683926 Apr 26 22:48 pilot3.tar.gz
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas        100 Apr 27 05:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 07:29:14] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 27 05:31 run_atlas
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas        105 Apr 27 05:31 job.xml
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas 2227092651 Apr 27 05:32 EVNT.49820242._000033.pool.root.1
[2026-04-27 07:29:14] drwxrwx--x. 2 boincer umatlas       4096 Apr 27 05:32 shared
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas     697415 Apr 27 05:32 input.tar.gz
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 05:32 start_atlas.sh
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas          0 Apr 27 05:32 boinc_lockfile
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas       2549 Apr 27 05:32 pandaJob.out
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas         57 Apr 27 05:32 setup.sh.local
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas     996863 Apr 27 05:33 agis_schedconf.cvmfs.json
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas    1509089 Apr 27 05:33 agis_ddmendpoints.agis.ALL.json
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas        430 Apr 27 05:33 workernode_map.json
[2026-04-27 07:29:14] drwx------. 5 boincer umatlas       4096 Apr 27 05:33 pilot3
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas       7085 Apr 27 07:20 init_data.xml
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas  269246148 Apr 27 07:27 HITS.49820244._019118.pool.root.1
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas        488 Apr 27 07:27 boinc_task_state.xml
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas       1035 Apr 27 07:28 memory_monitor_summary.json
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas     391112 Apr 27 07:28 log.49820244._019118.job.log.tgz.1
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas       6353 Apr 27 07:28 heartbeat_new.json
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas       6244 Apr 27 07:28 heartbeat.json
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas         95 Apr 27 07:28 pilot_heartbeat.json
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas       8192 Apr 27 07:29 boinc_mmap_file
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas         27 Apr 27 07:29 wrapper_checkpoint.txt
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas       5009 Apr 27 07:29 pilotlog.txt
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas     641897 Apr 27 07:29 log.49820244._019118.job.log.1
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas        357 Apr 27 07:29 output.list
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas        410 Apr 27 07:29 runtime_log
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas    1054720 Apr 27 07:29 result.tar.gz
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas       8954 Apr 27 07:29 runtime_log.err
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas        651 Apr 27 07:29 cdeccc133a42.diag
[2026-04-27 07:29:14] -rw-r--r--. 1 boincer umatlas      21160 Apr 27 07:29 stderr.txt
[2026-04-27 07:29:14] HITS file was successfully produced:
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas 269246148 Apr 27 07:27 shared/HITS.pool.root.1
[2026-04-27 07:29:14]  *** Contents of shared directory: ***
[2026-04-27 07:29:14] total 2439572
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas 2227092651 Apr 27 05:32 ATLAS.root_0
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas     697415 Apr 27 05:32 input.tar.gz
[2026-04-27 07:29:14] -rw-r--r--. 2 boincer umatlas      15667 Apr 27 05:32 start_atlas.sh
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas  269246148 Apr 27 07:27 HITS.pool.root.1
[2026-04-27 07:29:14] -rw-------. 1 boincer umatlas    1054720 Apr 27 07:29 result.tar.gz
07:29:15 (2889027): run_atlas exited; CPU time 40240.203455
07:29:15 (2889027): called boinc_finish(0)

</stderr_txt>
]]>

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