Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:32:20 (2164746): wrapper (7.7.26015): starting
16:32:20 (2164746): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 16:32:20] Arguments: --nthreads 4
[2026-04-27 16:32:20] Threads: 4
[2026-04-27 16:32:20] Checking for CVMFS
[2026-04-27 16:32:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 16:32:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 16:32:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 16:32:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 16:32:21] 2.13.3.0 425812 1735 50364 158942 3 50 3463365 6144001 6447 130560 0 4190398 99.996 67827 934 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-04-27 16:32:21] CVMFS is ok
[2026-04-27 16:32:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 16:32:21] Checking for apptainer binary...
[2026-04-27 16:32:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 16:32:21] Running /usr/bin/apptainer --version
[2026-04-27 16:32:21] apptainer version 1.4.5
[2026-04-27 16:32:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 16:32:21] Starfish-Cruncher
[2026-04-27 16:32:21] apptainer works
[2026-04-27 16:32:21] Set ATHENA_PROC_NUMBER=4
[2026-04-27 16:32:21] Set ATHENA_CORE_NUMBER=4
[2026-04-27 16:32:21] Starting ATLAS job with PandaID=7116218609
[2026-04-27 16:32:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 20:26:08]  *** The last 200 lines of the pilot log: ***
[2026-04-27 20:26:08] 2026-04-28 01:25:08,503 | INFO     | this job has now completed (state=finished)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,503 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,503 | INFO     | log transfer has been attempted: DONE
[2026-04-27 20:26:08] 2026-04-28 01:25:08,503 | INFO     | job 7116218609 has finished - writing final server update
[2026-04-27 20:26:08] 2026-04-28 01:25:08,506 | INFO     | total number of processed events: 400 (read)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,511 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7116218609/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,512 | INFO     | extracted standard info from prmon json
[2026-04-27 20:26:08] 2026-04-28 01:25:08,512 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 20:26:08] 2026-04-28 01:25:08,512 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 20:26:08] 2026-04-28 01:25:08,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 20:26:08] 2026-04-28 01:25:08,515 | INFO     | fitting pss+swap vs Time
[2026-04-27 20:26:08] 2026-04-28 01:25:08,515 | INFO     | sum of square deviations: 3723716330.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,516 | INFO     | sum of deviations: -46654459931.99999
[2026-04-27 20:26:08] 2026-04-28 01:25:08,517 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,517 | INFO     | mean y: 2375830.0873362445
[2026-04-27 20:26:08] 2026-04-28 01:25:08,517 | INFO     | intersect: 2375830.0873362445
[2026-04-27 20:26:08] 2026-04-28 01:25:08,517 | INFO     | chi2: 2.307724830488092
[2026-04-27 20:26:08] 2026-04-28 01:25:08,517 | INFO     | sum of square deviations: 3485088600.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,518 | INFO     | sum of deviations: -32320587181.499992
[2026-04-27 20:26:08] 2026-04-28 01:25:08,518 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,519 | INFO     | mean y: 2384840.8883928573
[2026-04-27 20:26:08] 2026-04-28 01:25:08,519 | INFO     | intersect: 2384840.8883928573
[2026-04-27 20:26:08] 2026-04-28 01:25:08,519 | INFO     | chi2: 1.6480561440757469
[2026-04-27 20:26:08] 2026-04-28 01:25:08,519 | INFO     | current chi2=1.6480561440757469 (change=28.585240220031906 %)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,519 | INFO     | sum of square deviations: 3256879670.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,520 | INFO     | sum of deviations: -31422088565.999992
[2026-04-27 20:26:08] 2026-04-28 01:25:08,520 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,520 | INFO     | mean y: 2385441.634703196
[2026-04-27 20:26:08] 2026-04-28 01:25:08,520 | INFO     | intersect: 2385441.634703196
[2026-04-27 20:26:08] 2026-04-28 01:25:08,521 | INFO     | chi2: 1.6448124809293114
[2026-04-27 20:26:08] 2026-04-28 01:25:08,521 | INFO     | current chi2=1.6448124809293114 (change=0.1968175148701939 %)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,521 | INFO     | right removable region: 218
[2026-04-27 20:26:08] 2026-04-28 01:25:08,521 | INFO     | sum of square deviations: 3485088600.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,522 | INFO     | sum of deviations: -69265382300.5
[2026-04-27 20:26:08] 2026-04-28 01:25:08,522 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,522 | INFO     | mean y: 2390039.441964286
[2026-04-27 20:26:08] 2026-04-28 01:25:08,523 | INFO     | intersect: 2390039.441964286
[2026-04-27 20:26:08] 2026-04-28 01:25:08,523 | INFO     | chi2: 1.0699600170723824
[2026-04-27 20:26:08] 2026-04-28 01:25:08,523 | INFO     | current chi2=1.0699600170723824 (change=53.635719348477 %)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,523 | INFO     | sum of square deviations: 3256879670.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,524 | INFO     | sum of deviations: -58855229996.00001
[2026-04-27 20:26:08] 2026-04-28 01:25:08,524 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,524 | INFO     | mean y: 2383078.8630136987
[2026-04-27 20:26:08] 2026-04-28 01:25:08,524 | INFO     | intersect: 2383078.8630136987
[2026-04-27 20:26:08] 2026-04-28 01:25:08,525 | INFO     | chi2: 1.0416263707483013
[2026-04-27 20:26:08] 2026-04-28 01:25:08,525 | INFO     | current chi2=1.0416263707483013 (change=2.6481032816167676 %)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,525 | INFO     | left removable region: 10
[2026-04-27 20:26:08] 2026-04-28 01:25:08,525 | INFO     | sum of square deviations: 2790348132.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,526 | INFO     | sum of deviations: -43558648962.500015
[2026-04-27 20:26:08] 2026-04-28 01:25:08,526 | INFO     | mean x (centered): 0.0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,526 | INFO     | mean y: 2393664.581730769
[2026-04-27 20:26:08] 2026-04-28 01:25:08,526 | INFO     | intersect: 2393664.581730769
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | chi2: 0.3607963602085501
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | current memory leak: -15.61 B/s (using 208 data points, chi2=0.36)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | could have reported an average CPU frequency of 3531 MHz (11 samples)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | ..............................
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . Timing measurements:
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . get job = 0 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . initial setup = 6 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . payload setup = 7 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . stage-in = 0 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,527 | INFO     | . payload execution = 13919 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,528 | INFO     | . stage-out = 2 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,528 | INFO     | . log creation = 0 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,528 | INFO     | ..............................
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | 
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | job summary report
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | --------------------------------------------------
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | PanDA job id: 7116218609
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | task id: 49820244
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | errors: (none)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | pilot state: finished 
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | transexitcode: 0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | exeerrorcode: 0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | exeerrordiag: 
[2026-04-27 20:26:08] 2026-04-28 01:25:08,597 | INFO     | exitcode: 0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | exitmsg: OK
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | cpuconsumptiontime: 53470 s
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | nevents: 400
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | neventsw: 0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | pid: 2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | pgrp: 2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | corecount: 4
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | event service: False
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | sizes: {0: 2282484, 11: 2282484, 13931: 2313034, 13933: 2322046, 13936: 2322102, 13938: 2322296}
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | --------------------------------------------------
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | 
[2026-04-27 20:26:08] 2026-04-28 01:25:08,598 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-04-27 20:26:08] 2026-04-28 01:25:08,615 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | job 7116218609 has completed (purged errors)
[2026-04-27 20:26:08] 2026-04-28 01:25:08,617 | INFO     | overall cleanup function is called
[2026-04-27 20:26:08] 2026-04-28 01:25:09,623 | INFO     | --- collectZombieJob: --- 10, [2173816]
[2026-04-27 20:26:08] 2026-04-28 01:25:09,623 | INFO     | zombie collector waiting for pid 2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:09,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 20:26:08] 2026-04-28 01:25:09,623 | INFO     | collected zombie processes
[2026-04-27 20:26:08] 2026-04-28 01:25:09,623 | INFO     | will attempt to kill all subprocesses of pid=2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:09,758 | INFO     | process IDs to be killed: [2173816] (in reverse order)
[2026-04-27 20:26:08] 2026-04-28 01:25:09,820 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 20:26:08] 2026-04-28 01:25:09,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 20:26:08] 2026-04-28 01:25:09,825 | INFO     | did not find any defunct processes belonging to 2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:09,829 | INFO     | did not find any defunct processes belonging to 2173816
[2026-04-27 20:26:08] 2026-04-28 01:25:09,829 | INFO     | Ready for new job
[2026-04-27 20:26:08] 2026-04-28 01:25:09,831 | INFO     | ***************************************
[2026-04-27 20:26:08] 2026-04-28 01:25:09,831 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 20:26:08] 2026-04-28 01:25:09,831 | INFO     | ***************************************
[2026-04-27 20:26:08] 2026-04-28 01:25:09,831 | INFO     | 
[2026-04-27 20:26:08] 2026-04-28 01:25:09,832 | INFO     | architecture information:
[2026-04-27 20:26:08] 2026-04-28 01:25:09,833 | INFO     | executing command: cat /etc/os-release
[2026-04-27 20:26:08] 2026-04-28 01:25:09,847 | INFO     | cat /etc/os-release:
[2026-04-27 20:26:08] NAME="CentOS Linux"
[2026-04-27 20:26:08] VERSION="7 (Core)"
[2026-04-27 20:26:08] ID="centos"
[2026-04-27 20:26:08] ID_LIKE="rhel fedora"
[2026-04-27 20:26:08] VERSION_ID="7"
[2026-04-27 20:26:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 20:26:08] ANSI_COLOR="0;31"
[2026-04-27 20:26:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 20:26:08] HOME_URL="https://www.centos.org/"
[2026-04-27 20:26:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 20:26:08] 
[2026-04-27 20:26:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 20:26:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 20:26:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 20:26:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 20:26:08] 
[2026-04-27 20:26:08] 2026-04-28 01:25:09,847 | INFO     | ***************************************
[2026-04-27 20:26:08] 2026-04-28 01:25:10,350 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-04-27 20:26:08] 2026-04-28 01:25:10,364 | INFO     | sufficient remaining disk space (1753762234368 B)
[2026-04-27 20:26:08] 2026-04-28 01:25:10,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 20:26:08] 2026-04-28 01:25:10,364 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 20:26:08] 2026-04-28 01:25:10,364 | INFO     | update_server=False
[2026-04-27 20:26:08] 2026-04-28 01:25:10,364 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 20:26:08] 2026-04-28 01:25:10,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 20:26:08] 2026-04-28 01:25:10,401 | INFO     | all data control threads have been joined
[2026-04-27 20:26:08] 2026-04-28 01:25:10,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 20:26:08] 2026-04-28 01:25:10,516 | INFO     | aborting loop
[2026-04-27 20:26:08] 2026-04-28 01:25:11,305 | INFO     | all payload control threads have been joined
[2026-04-27 20:26:08] 2026-04-28 01:25:11,370 | INFO     | [job] retrieve thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,370 | INFO     | [job] queue monitor thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,405 | INFO     | [data] control thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,510 | INFO     | all job control threads have been joined
[2026-04-27 20:26:08] 2026-04-28 01:25:11,520 | INFO     | [job] job monitor thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 20:26:08] 2026-04-28 01:25:11,870 | INFO     | [payload] validate_post thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,886 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:11,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 20:26:08] 2026-04-28 01:25:12,000 | INFO     | [job] validate thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,092 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,311 | INFO     | [payload] control thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,516 | INFO     | [job] control thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,567 | INFO     | [data] copytool_in thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,567 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:12,881 | INFO     | [payload] failed_post thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:13,769 | INFO     | [data] copytool_out thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:15,967 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:20,644 | INFO     | job.realtimelogging is not enabled
[2026-04-27 20:26:08] 2026-04-28 01:25:21,650 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 20:26:08] 2026-04-28 01:25:41,630 | INFO     | PID=2169044 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 20:26:08] 2026-04-28 01:25:41,630 | INFO     | .. there are 8 such processes running
[2026-04-27 20:26:08] 2026-04-28 01:25:41,631 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 20:26:08] 2026-04-28 01:25:41,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 20:26:08] 2026-04-28 01:25:41,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 20:26:08] 2026-04-28 01:26:01,718 | INFO     | [monitor] cgroup control has ended
[2026-04-27 20:26:08] 2026-04-28 01:26:03,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131587431147328)>', '<ExcThread(monitor, started 131587085674240)>']
[2026-04-27 20:26:08] 2026-04-28 01:26:03,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 20:26:08] 2026-04-28 01:26:03,746 | INFO     | [monitor] control thread has ended
[2026-04-27 20:26:08] 2026-04-28 01:26:08,632 | INFO     | all workflow threads have been joined
[2026-04-27 20:26:08] 2026-04-28 01:26:08,633 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 20:26:08] 2026-04-28 01:26:08,633 | INFO     | traces error code: 0
[2026-04-27 20:26:08] 2026-04-28 01:26:08,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 20:26:08] 2026-04-28 01:26:08,710 [wrapper] ==== pilot stdout END ====
[2026-04-27 20:26:08] 2026-04-28 01:26:08,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 20:26:08] 2026-04-28 01:26:08,714 [wrapper] pilotpid: 2169044
[2026-04-27 20:26:08] 2026-04-28 01:26:08,715 [wrapper] Pilot exit status: 0
[2026-04-27 20:26:08] 2026-04-28 01:26:08,724 [wrapper] pandaids: 7116218609
[2026-04-27 20:26:08] 2026-04-28 01:26:08,769 [wrapper] cleanup supervisor_pilot 2370385 2169045
[2026-04-27 20:26:08] 2026-04-28 01:26:08,772 [wrapper] Test setup, not cleaning
[2026-04-27 20:26:08] 2026-04-28 01:26:08,774 [wrapper] apfmon messages muted
[2026-04-27 20:26:08] 2026-04-28 01:26:08,776 [wrapper] ==== wrapper stdout END ====
[2026-04-27 20:26:08] 2026-04-28 01:26:08,779 [wrapper] ==== wrapper stderr END ====
[2026-04-27 20:26:08]  *** Error codes and diagnostics ***
[2026-04-27 20:26:08]     "exeErrorCode": 0,
[2026-04-27 20:26:08]     "pilotErrorCode": 0,
[2026-04-27 20:26:08]  *** Listing of results directory ***
[2026-04-27 20:26:08] total 2488300
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc     683926 Apr 26 21:13 pilot3.tar.gz
[2026-04-27 20:26:08] -rwx------ 1 boinc boinc      36322 Apr 26 21:44 runpilot2-wrapper.sh
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc       5631 Apr 26 21:45 queuedata.json
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc        100 Apr 27 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 20:26:08] -rwxr-xr-x 1 boinc boinc       7986 Apr 27 16:32 run_atlas
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc        105 Apr 27 16:32 job.xml
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc       9580 Apr 27 16:32 init_data.xml
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc 2264395303 Apr 27 16:32 EVNT.49820242._000040.pool.root.1
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc      15667 Apr 27 16:32 start_atlas.sh
[2026-04-27 20:26:08] drwxrwx--x 2 boinc boinc       4096 Apr 27 16:32 shared
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc     697417 Apr 27 16:32 input.tar.gz
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc          0 Apr 27 16:32 boinc_lockfile
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc       2549 Apr 27 16:32 pandaJob.out
[2026-04-27 20:26:08] -rw------- 1 boinc boinc     997805 Apr 27 16:32 agis_schedconf.cvmfs.json
[2026-04-27 20:26:08] -rw------- 1 boinc boinc        423 Apr 27 16:32 workernode_map.json
[2026-04-27 20:26:08] drwx------ 5 boinc boinc       4096 Apr 27 16:32 pilot3
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc        489 Apr 27 20:24 boinc_task_state.xml
[2026-04-27 20:26:08] -rw------- 1 boinc boinc  275937565 Apr 27 20:24 HITS.49820244._019927.pool.root.1
[2026-04-27 20:26:08] -rw------- 1 boinc boinc       1026 Apr 27 20:24 memory_monitor_summary.json
[2026-04-27 20:26:08] -rw------- 1 boinc boinc    1512704 Apr 27 20:25 agis_ddmendpoints.agis.ALL.json
[2026-04-27 20:26:08] -rw------- 1 boinc boinc     452127 Apr 27 20:25 log.49820244._019927.job.log.tgz.1
[2026-04-27 20:26:08] -rw------- 1 boinc boinc       6330 Apr 27 20:25 heartbeat_new.json
[2026-04-27 20:26:08] -rw------- 1 boinc boinc       6221 Apr 27 20:25 heartbeat.json
[2026-04-27 20:26:08] -rw------- 1 boinc boinc         95 Apr 27 20:25 pilot_heartbeat.json
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc         28 Apr 27 20:26 wrapper_checkpoint.txt
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc       8192 Apr 27 20:26 boinc_mmap_file
[2026-04-27 20:26:08] -rw------- 1 boinc boinc       4903 Apr 27 20:26 pilotlog.txt
[2026-04-27 20:26:08] -rw------- 1 boinc boinc    1318829 Apr 27 20:26 log.49820244._019927.job.log.1
[2026-04-27 20:26:08] -rw------- 1 boinc boinc        357 Apr 27 20:26 output.list
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc        410 Apr 27 20:26 runtime_log
[2026-04-27 20:26:08] -rw------- 1 boinc boinc    1792000 Apr 27 20:26 result.tar.gz
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc       8556 Apr 27 20:26 runtime_log.err
[2026-04-27 20:26:08] -rw------- 1 boinc boinc        657 Apr 27 20:26 cd7dc4da06ca.diag
[2026-04-27 20:26:08] -rw-r--r-- 1 boinc boinc      20673 Apr 27 20:26 stderr.txt
[2026-04-27 20:26:08] HITS file was successfully produced:
[2026-04-27 20:26:08] -rw------- 1 boinc boinc 275937565 Apr 27 20:24 shared/HITS.pool.root.1
[2026-04-27 20:26:08]  *** Contents of shared directory: ***
[2026-04-27 20:26:08] total 2483256
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc 2264395303 Apr 27 16:32 ATLAS.root_0
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc      15667 Apr 27 16:32 start_atlas.sh
[2026-04-27 20:26:08] -rw-r--r-- 2 boinc boinc     697417 Apr 27 16:32 input.tar.gz
[2026-04-27 20:26:08] -rw------- 1 boinc boinc  275937565 Apr 27 20:24 HITS.pool.root.1
[2026-04-27 20:26:08] -rw------- 1 boinc boinc    1792000 Apr 27 20:26 result.tar.gz
20:26:10 (2164746): run_atlas exited; CPU time 53678.393579
20:26:10 (2164746): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN