Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:41:25 (7681): wrapper (7.7.26015): starting
23:41:25 (7681): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 23:41:25] Arguments: --nthreads 8
[2026-04-27 23:41:25] Threads: 8
[2026-04-27 23:41:25] Checking for CVMFS
[2026-04-27 23:41:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 23:41:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 23:41:29] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 23:41:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 23:41:30] 2.11.2.0 10636 17557 102096 158942 2 53 14217191 25165825 96 130560 0 6207188 99.891 5138845 11380 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-27 23:41:30] CVMFS is ok
[2026-04-27 23:41:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 23:41:30] Checking for apptainer binary...
[2026-04-27 23:41:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 23:41:30] Running /usr/bin/apptainer --version
[2026-04-27 23:41:30] apptainer version 1.3.2-1.el7
[2026-04-27 23:41:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 23:41:49] cg-vwn366.simple-grid.lan
[2026-04-27 23:41:49] apptainer works
[2026-04-27 23:41:49] Set ATHENA_PROC_NUMBER=8
[2026-04-27 23:41:49] Set ATHENA_CORE_NUMBER=8
[2026-04-27 23:41:49] Starting ATLAS job with PandaID=7114639268
[2026-04-27 23:41:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 05:30:10]  *** The last 200 lines of the pilot log: ***
[2026-04-28 05:30:10] 2026-04-28 03:29:04,230 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,230 | INFO     | log transfer has been attempted: DONE
[2026-04-28 05:30:10] 2026-04-28 03:29:04,230 | INFO     | job 7114639268 has finished - writing final server update
[2026-04-28 05:30:10] 2026-04-28 03:29:04,230 | INFO     | total number of processed events: 400 (read)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,232 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7114639268/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,233 | INFO     | extracted standard info from prmon json
[2026-04-28 05:30:10] 2026-04-28 03:29:04,233 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 05:30:10] 2026-04-28 03:29:04,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 05:30:10] 2026-04-28 03:29:04,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 05:30:10] 2026-04-28 03:29:04,241 | INFO     | fitting pss+swap vs Time
[2026-04-28 05:30:10] 2026-04-28 03:29:04,241 | INFO     | sum of square deviations: 11042365180.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,245 | INFO     | sum of deviations: 231898495052.99997
[2026-04-28 05:30:10] 2026-04-28 03:29:04,245 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,245 | INFO     | mean y: 2452509.2036474166
[2026-04-28 05:30:10] 2026-04-28 03:29:04,246 | INFO     | intersect: 2452509.2036474166
[2026-04-28 05:30:10] 2026-04-28 03:29:04,246 | INFO     | chi2: 8.8748266916508
[2026-04-28 05:30:10] 2026-04-28 03:29:04,247 | INFO     | sum of square deviations: 10546523325.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,250 | INFO     | sum of deviations: 250270806801.5
[2026-04-28 05:30:10] 2026-04-28 03:29:04,251 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,251 | INFO     | mean y: 2458075.7191358022
[2026-04-28 05:30:10] 2026-04-28 03:29:04,251 | INFO     | intersect: 2458075.7191358022
[2026-04-28 05:30:10] 2026-04-28 03:29:04,251 | INFO     | chi2: 8.148274750270462
[2026-04-28 05:30:10] 2026-04-28 03:29:04,252 | INFO     | current chi2=8.148274750270462 (change=8.186660614610746 %)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,252 | INFO     | right removable region: 323
[2026-04-28 05:30:10] 2026-04-28 03:29:04,252 | INFO     | sum of square deviations: 10546523325.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,256 | INFO     | sum of deviations: 112187720987.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,256 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,256 | INFO     | mean y: 2489319.024691358
[2026-04-28 05:30:10] 2026-04-28 03:29:04,256 | INFO     | intersect: 2489319.024691358
[2026-04-28 05:30:10] 2026-04-28 03:29:04,257 | INFO     | chi2: 3.643584277257146
[2026-04-28 05:30:10] 2026-04-28 03:29:04,257 | INFO     | current chi2=3.643584277257146 (change=58.94472755524417 %)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,258 | INFO     | sum of square deviations: 10065751520.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,261 | INFO     | sum of deviations: 23105267070.000008
[2026-04-28 05:30:10] 2026-04-28 03:29:04,261 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,261 | INFO     | mean y: 2517542.0031347964
[2026-04-28 05:30:10] 2026-04-28 03:29:04,262 | INFO     | intersect: 2517542.0031347964
[2026-04-28 05:30:10] 2026-04-28 03:29:04,262 | INFO     | chi2: 0.9231836906395277
[2026-04-28 05:30:10] 2026-04-28 03:29:04,262 | INFO     | current chi2=0.9231836906395277 (change=74.6627600628881 %)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,263 | INFO     | sum of square deviations: 9599817202.5
[2026-04-28 05:30:10] 2026-04-28 03:29:04,266 | INFO     | sum of deviations: 6567295257.999996
[2026-04-28 05:30:10] 2026-04-28 03:29:04,266 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,267 | INFO     | mean y: 2522943.5987261147
[2026-04-28 05:30:10] 2026-04-28 03:29:04,267 | INFO     | intersect: 2522943.5987261147
[2026-04-28 05:30:10] 2026-04-28 03:29:04,267 | INFO     | chi2: 0.8250536682582956
[2026-04-28 05:30:10] 2026-04-28 03:29:04,267 | INFO     | current chi2=0.8250536682582956 (change=10.629522962353603 %)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,268 | INFO     | left removable region: 15
[2026-04-28 05:30:10] 2026-04-28 03:29:04,268 | INFO     | sum of square deviations: 9059954057.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,271 | INFO     | sum of deviations: 27376260393.999996
[2026-04-28 05:30:10] 2026-04-28 03:29:04,272 | INFO     | mean x (centered): 0.0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,272 | INFO     | mean y: 2529881.8181818184
[2026-04-28 05:30:10] 2026-04-28 03:29:04,272 | INFO     | intersect: 2529881.8181818184
[2026-04-28 05:30:10] 2026-04-28 03:29:04,272 | INFO     | chi2: 0.031927516460651895
[2026-04-28 05:30:10] 2026-04-28 03:29:04,273 | INFO     | current memory leak: 3.02 B/s (using 308 data points, chi2=0.03)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,273 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | ..............................
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . Timing measurements:
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . get job = 0 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . initial setup = 117 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . payload setup = 215 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . stage-in = 0 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . payload execution = 20202 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,274 | INFO     | . stage-out = 4 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,275 | INFO     | . log creation = 1 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,275 | INFO     | ..............................
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | 
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | job summary report
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | --------------------------------------------------
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | PanDA job id: 7114639268
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | task id: 49863771
[2026-04-28 05:30:10] 2026-04-28 03:29:04,411 | INFO     | errors: (none)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | pilot state: finished 
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | transexitcode: 0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | exeerrorcode: 0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | exeerrordiag: 
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | exitcode: 0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | exitmsg: OK
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | cpuconsumptiontime: 76778 s
[2026-04-28 05:30:10] 2026-04-28 03:29:04,412 | INFO     | nevents: 400
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | neventsw: 0
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | pid: 16156
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | pgrp: 16156
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | corecount: 8
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | event service: False
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | sizes: {0: 2280646, 1: 2281103, 2: 2282559, 12: 2282559, 20422: 2315993, 20427: 2325175, 20428: 2325313}
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | --------------------------------------------------
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | 
[2026-04-28 05:30:10] 2026-04-28 03:29:04,413 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-28 05:30:10] 2026-04-28 03:29:04,960 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 05:30:10] 2026-04-28 03:29:04,963 | INFO     | job 7114639268 has completed (purged errors)
[2026-04-28 05:30:10] 2026-04-28 03:29:04,963 | INFO     | overall cleanup function is called
[2026-04-28 05:30:10] 2026-04-28 03:29:05,971 | INFO     | --- collectZombieJob: --- 10, [16156]
[2026-04-28 05:30:10] 2026-04-28 03:29:05,972 | INFO     | zombie collector waiting for pid 16156
[2026-04-28 05:30:10] 2026-04-28 03:29:05,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 05:30:10] 2026-04-28 03:29:05,972 | INFO     | collected zombie processes
[2026-04-28 05:30:10] 2026-04-28 03:29:05,972 | INFO     | will attempt to kill all subprocesses of pid=16156
[2026-04-28 05:30:10] 2026-04-28 03:29:06,041 | INFO     | process IDs to be killed: [16156] (in reverse order)
[2026-04-28 05:30:10] 2026-04-28 03:29:07,091 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 05:30:10] 2026-04-28 03:29:07,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 05:30:10] 2026-04-28 03:29:07,094 | INFO     | did not find any defunct processes belonging to 16156
[2026-04-28 05:30:10] 2026-04-28 03:29:07,095 | INFO     | did not find any defunct processes belonging to 16156
[2026-04-28 05:30:10] 2026-04-28 03:29:07,096 | INFO     | Ready for new job
[2026-04-28 05:30:10] 2026-04-28 03:29:07,097 | INFO     | ***************************************
[2026-04-28 05:30:10] 2026-04-28 03:29:07,098 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 05:30:10] 2026-04-28 03:29:07,098 | INFO     | ***************************************
[2026-04-28 05:30:10] 2026-04-28 03:29:07,098 | INFO     | 
[2026-04-28 05:30:10] 2026-04-28 03:29:07,098 | INFO     | pilot is running in a VM
[2026-04-28 05:30:10] 2026-04-28 03:29:07,099 | INFO     | architecture information:
[2026-04-28 05:30:10] 2026-04-28 03:29:07,107 | INFO     | executing command: cat /etc/os-release
[2026-04-28 05:30:10] 2026-04-28 03:29:07,473 | INFO     | cat /etc/os-release:
[2026-04-28 05:30:10] NAME="CentOS Linux"
[2026-04-28 05:30:10] VERSION="7 (Core)"
[2026-04-28 05:30:10] ID="centos"
[2026-04-28 05:30:10] ID_LIKE="rhel fedora"
[2026-04-28 05:30:10] VERSION_ID="7"
[2026-04-28 05:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 05:30:10] ANSI_COLOR="0;31"
[2026-04-28 05:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 05:30:10] HOME_URL="https://www.centos.org/"
[2026-04-28 05:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 05:30:10] 
[2026-04-28 05:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 05:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 05:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 05:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 05:30:10] 
[2026-04-28 05:30:10] 2026-04-28 03:29:07,473 | INFO     | ***************************************
[2026-04-28 05:30:10] 2026-04-28 03:29:07,977 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-28 05:30:10] 2026-04-28 03:29:08,218 | INFO     | sufficient remaining disk space (494004076544 B)
[2026-04-28 05:30:10] 2026-04-28 03:29:08,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 05:30:10] 2026-04-28 03:29:08,219 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 05:30:10] 2026-04-28 03:29:08,219 | INFO     | update_server=False
[2026-04-28 05:30:10] 2026-04-28 03:29:08,219 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 05:30:10] 2026-04-28 03:29:08,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 05:30:10] 2026-04-28 03:29:08,242 | INFO     | aborting loop
[2026-04-28 05:30:10] 2026-04-28 03:29:08,893 | INFO     | all payload control threads have been joined
[2026-04-28 05:30:10] 2026-04-28 03:29:08,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 05:30:10] 2026-04-28 03:29:08,971 | INFO     | all data control threads have been joined
[2026-04-28 05:30:10] 2026-04-28 03:29:09,227 | INFO     | [job] retrieve thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,249 | INFO     | [job] job monitor thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 05:30:10] 2026-04-28 03:29:09,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 05:30:10] 2026-04-28 03:29:09,674 | INFO     | [payload] validate_post thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,745 | INFO     | all job control threads have been joined
[2026-04-28 05:30:10] 2026-04-28 03:29:09,828 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,900 | INFO     | [payload] control thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,954 | INFO     | [data] copytool_in thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:09,978 | INFO     | [data] control thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,163 | INFO     | [job] validate thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,256 | INFO     | [payload] failed_post thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,270 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,433 | INFO     | [job] queue monitor thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,702 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,752 | INFO     | [job] control thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:10,916 | INFO     | [data] copytool_out thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:13,566 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:18,372 | INFO     | job.realtimelogging is not enabled
[2026-04-28 05:30:10] 2026-04-28 03:29:19,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 05:30:10] 2026-04-28 03:29:37,824 | INFO     | PID=11704 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-28 05:30:10] 2026-04-28 03:29:37,824 | INFO     | .. there are 2 such processes running
[2026-04-28 05:30:10] 2026-04-28 03:29:37,826 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 05:30:10] 2026-04-28 03:29:37,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 05:30:10] 2026-04-28 03:29:37,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 05:30:10] 2026-04-28 03:29:58,915 | INFO     | [monitor] cgroup control has ended
[2026-04-28 05:30:10] 2026-04-28 03:30:00,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899133577024)>', '<ExcThread(monitor, started 139898627553024)>']
[2026-04-28 05:30:10] 2026-04-28 03:30:00,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 05:30:10] 2026-04-28 03:30:00,969 | INFO     | [monitor] control thread has ended
[2026-04-28 05:30:10] 2026-04-28 03:30:05,352 | INFO     | all workflow threads have been joined
[2026-04-28 05:30:10] 2026-04-28 03:30:05,353 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 05:30:10] 2026-04-28 03:30:05,353 | INFO     | traces error code: 0
[2026-04-28 05:30:10] 2026-04-28 03:30:05,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 05:30:10] 2026-04-28 03:30:05,797 [wrapper] ==== pilot stdout END ====
[2026-04-28 05:30:10] 2026-04-28 03:30:05,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 05:30:10] 2026-04-28 03:30:05,996 [wrapper] pilotpid: 11704
[2026-04-28 05:30:10] 2026-04-28 03:30:06,123 [wrapper] Pilot exit status: 0
[2026-04-28 05:30:10] 2026-04-28 03:30:06,663 [wrapper] pandaids: 7114639268
[2026-04-28 05:30:10] 2026-04-28 03:30:07,729 [wrapper] cleanup supervisor_pilot 24164 11705
[2026-04-28 05:30:10] 2026-04-28 03:30:07,732 [wrapper] Test setup, not cleaning
[2026-04-28 05:30:10] 2026-04-28 03:30:07,745 [wrapper] apfmon messages muted
[2026-04-28 05:30:10] 2026-04-28 03:30:07,841 [wrapper] ==== wrapper stdout END ====
[2026-04-28 05:30:10] 2026-04-28 03:30:07,919 [wrapper] ==== wrapper stderr END ====
[2026-04-28 05:30:10]  *** Error codes and diagnostics ***
[2026-04-28 05:30:10]     "exeErrorCode": 0,
[2026-04-28 05:30:10]     "pilotErrorCode": 0,
[2026-04-28 05:30:10]  *** Listing of results directory ***
[2026-04-28 05:30:10] total 478064
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc    683926 Apr 26 14:59 pilot3.tar.gz
[2026-04-28 05:30:10] -rwx------. 1 boinc boinc     36322 Apr 26 15:03 runpilot2-wrapper.sh
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:05 queuedata.json
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc       100 Apr 27 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 05:30:10] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 23:41 run_atlas
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc       105 Apr 27 23:41 job.xml
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc      6305 Apr 27 23:41 init_data.xml
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc 265103982 Apr 27 23:41 EVNT.49863768._000001.pool.root.1
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc     15667 Apr 27 23:41 start_atlas.sh
[2026-04-28 05:30:10] drwxrwx--x. 2 boinc boinc        68 Apr 27 23:41 shared
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc    697409 Apr 27 23:41 input.tar.gz
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc         0 Apr 27 23:41 boinc_lockfile
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc      2571 Apr 27 23:41 pandaJob.out
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc       415 Apr 27 23:48 workernode_map.json
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc    997805 Apr 27 23:48 agis_schedconf.cvmfs.json
[2026-04-28 05:30:10] drwx------. 5 boinc boinc      4096 Apr 27 23:48 pilot3
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc 215596738 Apr 28 05:27 HITS.49863771._000075.pool.root.1
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc       489 Apr 28 05:28 boinc_task_state.xml
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc      1012 Apr 28 05:28 memory_monitor_summary.json
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc   1512704 Apr 28 05:29 agis_ddmendpoints.agis.ALL.json
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc    464695 Apr 28 05:29 log.49863771._000075.job.log.tgz.1
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc      6324 Apr 28 05:29 heartbeat_new.json
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc      6215 Apr 28 05:29 heartbeat.json
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc        95 Apr 28 05:29 pilot_heartbeat.json
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc      8192 Apr 28 05:29 boinc_mmap_file
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc        28 Apr 28 05:29 wrapper_checkpoint.txt
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc      4955 Apr 28 05:30 pilotlog.txt
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc   1891512 Apr 28 05:30 log.49863771._000075.job.log.1
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc       357 Apr 28 05:30 output.list
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc       410 Apr 28 05:30 runtime_log
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc   2375680 Apr 28 05:30 result.tar.gz
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc      8439 Apr 28 05:30 runtime_log.err
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc       656 Apr 28 05:30 0d0c574fd23a.diag
[2026-04-28 05:30:10] -rw-r--r--. 1 boinc boinc     20618 Apr 28 05:30 stderr.txt
[2026-04-28 05:30:10] HITS file was successfully produced:
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc 215596738 Apr 28 05:27 shared/HITS.pool.root.1
[2026-04-28 05:30:10]  *** Contents of shared directory: ***
[2026-04-28 05:30:10] total 472456
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc 265103982 Apr 27 23:41 ATLAS.root_0
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc     15667 Apr 27 23:41 start_atlas.sh
[2026-04-28 05:30:10] -rw-r--r--. 2 boinc boinc    697409 Apr 27 23:41 input.tar.gz
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc 215596738 Apr 28 05:27 HITS.pool.root.1
[2026-04-28 05:30:10] -rw-------. 1 boinc boinc   2375680 Apr 28 05:30 result.tar.gz
05:30:11 (7681): run_atlas exited; CPU time 76980.682364
05:30:11 (7681): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN