Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 18:52:55 (35604): vboxwrapper version 26210
2026-04-27 18:52:55 (35604): BOINC client version: 8.2.4
2026-04-27 18:52:56 (35604): VBoxManage version raw: 
2026-04-27 18:53:03 (35604): Detected: VirtualBox VboxManage Interface (Version: Unknown)
2026-04-27 18:53:04 (35604): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 18:53:05 (35604): Create VM. (boinc_1ef35f692dbb4983, slot#2)
2026-04-27 18:53:06 (35604): Setting Memory Size for VM. (4200MB)
2026-04-27 18:53:06 (35604): Setting CPU Count for VM. (2)
2026-04-27 18:53:07 (35604): Setting Chipset Options for VM.
2026-04-27 18:53:07 (35604): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 18:53:07 (35604): Setting Boot Options for VM.
2026-04-27 18:53:10 (35604): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 18:53:11 (35604): Enabling VM Network Access.
2026-04-27 18:53:12 (35604): Disabling USB Support for VM.
2026-04-27 18:53:13 (35604): Disabling COM Port Support for VM.
2026-04-27 18:53:15 (35604): Disabling LPT Port Support for VM.
2026-04-27 18:53:16 (35604): Disabling Audio Support for VM.
2026-04-27 18:53:17 (35604): Disabling Clipboard Support for VM.
2026-04-27 18:53:17 (35604): Disabling Drag and Drop Support for VM.
2026-04-27 18:53:18 (35604): Adding storage controller(s) to VM.
2026-04-27 18:53:19 (35604): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 18:53:23 (35604): Adding VirtualBox Guest Additions to VM.
2026-04-27 18:53:23 (35604): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 18:53:24 (35604): forwarding host port 51731 to guest port 80
2026-04-27 18:53:25 (35604): Enabling remote desktop for VM.
2026-04-27 18:53:25 (35604): Required extension pack not installed, remote desktop not enabled.
2026-04-27 18:53:25 (35604): Enabling shared directory for VM.
2026-04-27 18:53:26 (35604): Starting VM using VBoxManage interface. (boinc_1ef35f692dbb4983, slot#2)
2026-04-27 18:53:44 (35604): Successfully started VM. (PID = '35212')
2026-04-27 18:53:44 (35604): Reporting VM Process ID to BOINC.
2026-04-27 18:53:44 (35604): Guest Log: BIOS: VirtualBox 7.2.2
2026-04-27 18:53:44 (35604): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 18:53:44 (35604): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 18:53:44 (35604): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 18:53:44 (35604): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 18:53:44 (35604): Detected: Web Application Enabled (http://localhost:51731)
2026-04-27 18:53:44 (35604): Preference change detected
2026-04-27 18:53:44 (35604): Setting CPU throttle for VM. (100%)
2026-04-27 18:53:45 (35604): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 18:53:45 (35604): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 18:53:45 (35604): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 18:53:51 (35604): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 18:53:51 (35604): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 18:53:51 (35604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 18:54:06 (35604): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 18:54:06 (35604): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-27 18:54:59 (35604): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000292 main     Log opened 2026-04-27T18:54:56.563431000Z
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000535 main     OS Product: Linux
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000585 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000628 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000672 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000673 main     Process ID: 1248
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.000674 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 18:54:59 (35604): Guest Log: 00:00:00.002714 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 18:54:59 (35604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 18:54:59 (35604): Guest Log: [INFO] Mounting shared directory
2026-04-27 18:54:59 (35604): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 18:55:08 (35604): Guest Log: 00:00:10.050806 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 702 296 000ns (GuestNow=1 777 308 907 908 250 000 ns GuestLast=1 777 316 096 610 546 000 ns fSetTimeLastLoop=true )
2026-04-27 18:55:59 (35604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 18:55:59 (35604): Guest Log: [INFO] Detected branch: prod
2026-04-27 18:55:59 (35604): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 18:55:59 (35604): Guest Log: Copying input files
2026-04-27 18:58:29 (35604): Guest Log: Copied input files into RunAtlas.
2026-04-27 18:58:29 (35604): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-27 18:58:29 (35604): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-27 18:58:29 (35604): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-27 18:58:29 (35604): Guest Log: Further information can be found at the LHC@home message board.
2026-04-27 18:58:58 (35604): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 18:58:58 (35604): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 18:58:58 (35604): Guest Log: 2.6.3.0 1542 3 32084 158935 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-27 18:59:08 (35604): Guest Log: copied the webapp to /var/www
2026-04-27 18:59:08 (35604): Guest Log: ATHENA_PROC_NUMBER=2
2026-04-27 18:59:08 (35604): Guest Log: ATHENA_CORE_NUMBER=2
2026-04-27 18:59:08 (35604): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 18:59:08 (35604): Guest Log:  *** Starting ATLAS job. (PandaID=7116216958 taskID=49820244) ***
2026-04-27 19:16:19 (35604): Guest Log:  *** Job finished ***
2026-04-27 19:16:19 (35604): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:15:46,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:15:46,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:08,250 | INFO     | [monitor] cgroup control has ended
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:10,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590382475072)>', '<ExcThread(monitor, started 140589630740224)>']
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:10,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:10,872 | INFO     | [monitor] control thread has ended
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,373 | INFO     | all workflow threads have been joined
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,374 | INFO     | end of generic workflow (traces error code: 0)
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,374 | INFO     | traces error code: 0
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,758 [wrapper] ==== pilot stdout END ====
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,777 [wrapper] ==== wrapper stdout RESUME ====
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,796 [wrapper] pilotpid: 5972
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,812 [wrapper] Pilot exit status: 0
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:15,922 [wrapper] pandaids: 7116216958
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:16,063 [wrapper] cleanup supervisor_pilot 25402 5973
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:16,080 [wrapper] Test setup, not cleaning
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:16,099 [wrapper] apfmon messages muted
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:16,111 [wrapper] ==== wrapper stdout END ====
2026-04-27 19:16:19 (35604): Guest Log: 2026-04-27 17:16:16,130 [wrapper] ==== wrapper stderr END ====
2026-04-27 19:16:19 (35604): Guest Log:  *** Error codes and diagnostics ***
2026-04-27 19:16:19 (35604): Guest Log:     "exeErrorCode": 65,
2026-04-27 19:16:19 (35604): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-04-27 19:16:19 (35604): Guest Log:     "pilotErrorCode": 1305,
2026-04-27 19:16:19 (35604): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-04-27 19:16:19 (35604): Guest Log:  *** Listing of results directory ***
2026-04-27 19:16:19 (35604): Guest Log: total 4604
2026-04-27 19:16:19 (35604): Guest Log: -rw-r--r--. 1 atlas atlas  683926 Apr 27 02:13 pilot3.tar.gz
2026-04-27 19:16:19 (35604): Guest Log: -rw-r--r--. 1 atlas atlas    5631 Apr 27 02:42 queuedata.json
2026-04-27 19:16:19 (35604): Guest Log: -rwx------. 1 atlas atlas   36322 Apr 27 02:43 runpilot2-wrapper.sh
2026-04-27 19:16:19 (35604): Guest Log: -rwxr-xr-x. 1 atlas atlas    5544 Apr 27 16:58 init_data.xml
2026-04-27 19:16:19 (35604): Guest Log: -rwxr-xr-x. 1 atlas atlas  697410 Apr 27 16:58 input.tar.gz
2026-04-27 19:16:19 (35604): Guest Log: -rwxr-xr-x. 1 atlas atlas   15667 Apr 27 16:58 start_atlas.sh
2026-04-27 19:16:19 (35604): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 27 16:58 EVNT.49820242._000035.pool.root.1 -> /data/./ATLAS.root_0
2026-04-27 19:16:19 (35604): Guest Log: -rw-r--r--. 1 atlas atlas    2549 Apr 27 16:59 pandaJob.out
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas  997697 Apr 27 17:00 agis_schedconf.cvmfs.json
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas 1512704 Apr 27 17:00 agis_ddmendpoints.agis.ALL.json
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas     429 Apr 27 17:01 workernode_map.json
2026-04-27 19:16:19 (35604): Guest Log: drwx------. 5 atlas atlas    4096 Apr 27 17:01 pilot3
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas   57324 Apr 27 17:13 log.49820244._019340.job.log.tgz.1
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas      95 Apr 27 17:14 pilot_heartbeat.json
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas    6760 Apr 27 17:15 heartbeat_new.json
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas    6738 Apr 27 17:15 heartbeat.json
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas    4804 Apr 27 17:16 pilotlog.txt
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas  272919 Apr 27 17:16 log.49820244._019340.job.log.1
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas     188 Apr 27 17:16 output.list
2026-04-27 19:16:19 (35604): Guest Log: -rw-r--r--. 1 atlas atlas     410 Apr 27 17:16 runtime_log
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas  348160 Apr 27 17:16 result.tar.gz
2026-04-27 19:16:19 (35604): Guest Log: -rw-r--r--. 1 atlas atlas    8252 Apr 27 17:16 runtime_log.err
2026-04-27 19:16:19 (35604): Guest Log: -rw-------. 1 atlas atlas     658 Apr 27 17:16 cd346fba81f5.diag
2026-04-27 19:16:19 (35604): Guest Log: Looking for outputfile HITS.49820244._019340.pool.root.1
2026-04-27 19:16:19 (35604): Guest Log: No HITS file was produced
2026-04-27 19:16:19 (35604): Guest Log: Successfully finished the ATLAS job!
2026-04-27 19:16:19 (35604): Guest Log: Copying the results back to the shared directory!
2026-04-27 19:16:19 (35604): Guest Log:  *** Contents of shared directory: ***
2026-04-27 19:16:19 (35604): Guest Log: total 2187768
2026-04-27 19:16:19 (35604): Guest Log: -rwxrwxrwx. 1 root root 2239200913 Apr 27 16:52 ATLAS.root_0
2026-04-27 19:16:19 (35604): Guest Log: -rwxrwxrwx. 1 root root       5544 Apr 27 16:52 init_data.xml
2026-04-27 19:16:19 (35604): Guest Log: -rwxrwxrwx. 1 root root     697410 Apr 27 06:37 input.tar.gz
2026-04-27 19:16:19 (35604): Guest Log: -rwxrwxrwx. 1 root root     348160 Apr 27 17:16 result.tar.gz
2026-04-27 19:16:19 (35604): Guest Log: -rwxrwxrwx. 1 root root      15667 Apr 27 06:37 start_atlas.sh
2026-04-27 19:16:19 (35604): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-27 19:16:19 (35604): VM Completion File Detected.
2026-04-27 19:16:19 (35604): Powering off VM.
2026-04-27 19:16:24 (35604): Successfully stopped VM.
2026-04-27 19:16:24 (35604): Deregistering VM. (boinc_1ef35f692dbb4983, slot#2)
2026-04-27 19:16:25 (35604): Removing network bandwidth throttle group from VM.
2026-04-27 19:16:25 (35604): Removing VM from VirtualBox.
2026-04-27 19:16:31 (35604): called boinc_finish(0)

</stderr_txt>
]]>

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