Name 569453521b36_1
Workunit 240932028
Created 27 Apr 2026, 1:52:08 UTC
Sent 27 Apr 2026, 2:17:03 UTC
Report deadline 5 May 2026, 2:17:03 UTC
Received 28 Apr 2026, 2:04:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11039682
Run time 17 min 27 sec
CPU time 8 hours 0 min 51 sec
Priority 28
Validate state Valid
Credit 473.35
Device peak FLOPS 94.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.78 GB
Peak swap size 3.22 GB
Peak disk usage 644.52 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:17:58 (3597370): wrapper (7.7.26015): starting
03:17:58 (3597370): wrapper: running run_atlas (--nthreads 12)
[2026-04-28 03:17:58] Arguments: --nthreads 12
[2026-04-28 03:17:58] Threads: 12
[2026-04-28 03:17:58] Checking for CVMFS
[2026-04-28 03:17:58] No cvmfs_config command found, will try listing directly
[2026-04-28 03:17:58] CVMFS is ok
[2026-04-28 03:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-28 03:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-28 03:17:58] Further information can be found at the LHC@home message board.
[2026-04-28 03:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-28 03:17:58] Checking for apptainer binary...
[2026-04-28 03:17:58] which: no apptainer in ((null))
[2026-04-28 03:17:58] apptainer is not installed, using version from CVMFS
[2026-04-28 03:17:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-28 03:17:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-28 03:17:58] apptainer works
[2026-04-28 03:17:58] Set ATHENA_PROC_NUMBER=12
[2026-04-28 03:17:58] Set ATHENA_CORE_NUMBER=12
[2026-04-28 03:17:58] Starting ATLAS job with PandaID=7116161000
[2026-04-28 03:17:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 04:03:32]  *** The last 200 lines of the pilot log: ***
[2026-04-28 04:03:32]  is_tar=False
[2026-04-28 04:03:32]  lfn=log.49863714._002214.job.log.tgz.1
[2026-04-28 04:03:32]  mtime=0
[2026-04-28 04:03:32]  protocol_id=None
[2026-04-28 04:03:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-28 04:03:32]  replicas=None
[2026-04-28 04:03:32]  scope=mc23_13p6TeV
[2026-04-28 04:03:32]  status=None
[2026-04-28 04:03:32]  status_code=0
[2026-04-28 04:03:32]  storage_token=
[2026-04-28 04:03:32]  surl=/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/log.49863714._002214.job.log.tgz.1
[2026-04-28 04:03:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/e3/log.49863714._002214.job.log.tgz.1
[2026-04-28 04:03:32]  workdir=None
[2026-04-28 04:03:32] ]
[2026-04-28 04:03:32] 2026-04-28 02:02:31,874 | INFO     | transferring file log.49863714._002214.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/log.49863714._002214.job.log.tgz.1 to /var/lib/
[2026-04-28 04:03:32] 2026-04-28 02:02:31,874 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/log.49863714._002214.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/1/
[2026-04-28 04:03:32] 2026-04-28 02:02:31,890 | INFO     | adding to output.list: log.49863714._002214.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/e3/log.49863714._002214.job.log.tg
[2026-04-28 04:03:32] 2026-04-28 02:02:31,890 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 04:03:32] 2026-04-28 02:02:31,890 | INFO     | summary of transferred files:
[2026-04-28 04:03:32] 2026-04-28 02:02:31,890 | INFO     |  -- lfn=log.49863714._002214.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 04:03:32] 2026-04-28 02:02:31,890 | INFO     | stage-out finished correctly
[2026-04-28 04:03:32] 2026-04-28 02:02:32,907 | WARNING  | process 3608132 can no longer be monitored (due to stat problems) - aborting
[2026-04-28 04:03:32] 2026-04-28 02:02:32,908 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 04:03:32] 2026-04-28 02:02:32,909 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 04:03:32] 2026-04-28 02:02:33,250 | INFO     | number of running child processes to parent process 3608132: 1
[2026-04-28 04:03:32] 2026-04-28 02:02:33,250 | INFO     | maximum number of monitored processes: 6
[2026-04-28 04:03:32] 2026-04-28 02:02:35,235 | INFO     | job 7116161000 has state=finished
[2026-04-28 04:03:32] 2026-04-28 02:02:35,235 | INFO     | preparing for final server update for job 7116161000 in state='finished'
[2026-04-28 04:03:32] 2026-04-28 02:02:35,753 | INFO     | monitor loop #201: job 0:7116161000 is in state 'finished'
[2026-04-28 04:03:32] 2026-04-28 02:02:35,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,771 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,772 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/jobReport.json
[2026-04-28 04:03:32] 2026-04-28 02:02:35,773 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/1/workernode_map.json
[2026-04-28 04:03:32] 2026-04-28 02:02:35,773 | INFO     | this job has now completed (state=finished)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,776 | INFO     | log transfer has been attempted: DONE
[2026-04-28 04:03:32] 2026-04-28 02:02:35,776 | INFO     | job 7116161000 has finished - writing final server update
[2026-04-28 04:03:32] 2026-04-28 02:02:35,776 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2028107/.job.ad'
[2026-04-28 04:03:32] 2026-04-28 02:02:35,776 | INFO     | total number of processed events: 400 (read)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,794 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7116161000/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,794 | INFO     | extracted standard info from prmon json
[2026-04-28 04:03:32] 2026-04-28 02:02:35,794 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 04:03:32] 2026-04-28 02:02:35,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 04:03:32] 2026-04-28 02:02:35,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | fitting pss+swap vs Time
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | sum of square deviations: 15695178.0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | sum of deviations: 78946383.0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | mean x (centered): 0.0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | mean y: 2758708.7837837837
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | intersect: 2758708.7837837837
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | chi2: 0.0005478450675596321
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | current memory leak: 5.03 B/s (using 37 data points, chi2=0.00)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,795 | INFO     | could have reported an average CPU frequency of 3638 MHz (5 samples)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | ..............................
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . Timing measurements:
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . get job = 0 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . initial setup = 4 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . payload setup = 6 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . stage-in = 0 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . payload execution = 2642 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . stage-out = 0 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | . log creation = 0 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,796 | INFO     | ..............................
[2026-04-28 04:03:32] 2026-04-28 02:02:35,843 | INFO     | 
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | job summary report
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | --------------------------------------------------
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | PanDA job id: 7116161000
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | task id: 49863714
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | errors: (none)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | pilot state: finished 
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | transexitcode: 0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | exeerrorcode: 0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | exeerrordiag: 
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | exitcode: 0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | exitmsg: OK
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | cpuconsumptiontime: 28703 s
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | nevents: 400
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | neventsw: 0
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | pid: 3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | pgrp: 3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | corecount: 12
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | event service: False
[2026-04-28 04:03:32] 2026-04-28 02:02:35,844 | INFO     | sizes: {0: 2282474, 10: 2282474, 2652: 2307738, 2653: 2316760, 2654: 2316816, 2657: 2317042}
[2026-04-28 04:03:32] 2026-04-28 02:02:35,845 | INFO     | --------------------------------------------------
[2026-04-28 04:03:32] 2026-04-28 02:02:35,845 | INFO     | 
[2026-04-28 04:03:32] 2026-04-28 02:02:35,845 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/1
[2026-04-28 04:03:32] 2026-04-28 02:02:35,862 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | job 7116161000 has completed (purged errors)
[2026-04-28 04:03:32] 2026-04-28 02:02:35,866 | INFO     | overall cleanup function is called
[2026-04-28 04:03:32] 2026-04-28 02:02:36,873 | INFO     | --- collectZombieJob: --- 10, [3608132]
[2026-04-28 04:03:32] 2026-04-28 02:02:36,873 | INFO     | zombie collector waiting for pid 3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:36,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 04:03:32] 2026-04-28 02:02:36,874 | INFO     | collected zombie processes
[2026-04-28 04:03:32] 2026-04-28 02:02:36,874 | INFO     | will attempt to kill all subprocesses of pid=3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:37,164 | INFO     | process IDs to be killed: [3608132] (in reverse order)
[2026-04-28 04:03:32] 2026-04-28 02:02:37,320 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 04:03:32] 2026-04-28 02:02:37,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 04:03:32] 2026-04-28 02:02:37,344 | INFO     | did not find any defunct processes belonging to 3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:37,365 | INFO     | did not find any defunct processes belonging to 3608132
[2026-04-28 04:03:32] 2026-04-28 02:02:37,365 | INFO     | Ready for new job
[2026-04-28 04:03:32] 2026-04-28 02:02:37,366 | INFO     | ***************************************
[2026-04-28 04:03:32] 2026-04-28 02:02:37,367 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 04:03:32] 2026-04-28 02:02:37,367 | INFO     | ***************************************
[2026-04-28 04:03:32] 2026-04-28 02:02:37,367 | INFO     | 
[2026-04-28 04:03:32] 2026-04-28 02:02:37,372 | INFO     | architecture information:
[2026-04-28 04:03:32] 2026-04-28 02:02:37,372 | INFO     | executing command: cat /etc/os-release
[2026-04-28 04:03:32] 2026-04-28 02:02:37,386 | INFO     | cat /etc/os-release:
[2026-04-28 04:03:32] NAME="CentOS Linux"
[2026-04-28 04:03:32] VERSION="7 (Core)"
[2026-04-28 04:03:32] ID="centos"
[2026-04-28 04:03:32] ID_LIKE="rhel fedora"
[2026-04-28 04:03:32] VERSION_ID="7"
[2026-04-28 04:03:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 04:03:32] ANSI_COLOR="0;31"
[2026-04-28 04:03:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 04:03:32] HOME_URL="https://www.centos.org/"
[2026-04-28 04:03:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 04:03:32] 
[2026-04-28 04:03:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 04:03:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 04:03:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 04:03:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 04:03:32] 
[2026-04-28 04:03:32] 2026-04-28 02:02:37,386 | INFO     | ***************************************
[2026-04-28 04:03:32] 2026-04-28 02:02:37,889 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | INFO     | sufficient remaining disk space (20367540224 B)
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | INFO     | update_server=False
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 04:03:32] 2026-04-28 02:02:37,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 04:03:32] 2026-04-28 02:02:38,256 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 04:03:32] 2026-04-28 02:02:38,257 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 04:03:32] 2026-04-28 02:02:38,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 04:03:32] 2026-04-28 02:02:38,257 | INFO     | will abort loop
[2026-04-28 04:03:32] 2026-04-28 02:02:38,848 | INFO     | all data control threads have been joined
[2026-04-28 04:03:32] 2026-04-28 02:02:38,909 | INFO     | [job] retrieve thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:38,956 | INFO     | all job control threads have been joined
[2026-04-28 04:03:32] 2026-04-28 02:02:38,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 04:03:32] 2026-04-28 02:02:39,083 | INFO     | [job] validate thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,176 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,262 | INFO     | [job] job monitor thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,265 | INFO     | all payload control threads have been joined
[2026-04-28 04:03:32] 2026-04-28 02:02:39,338 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,376 | INFO     | [payload] failed_post thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,516 | INFO     | [data] copytool_in thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,800 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,854 | INFO     | [data] control thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,910 | INFO     | [data] copytool_out thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:39,962 | INFO     | [job] control thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:40,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:40,270 | INFO     | [payload] control thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:40,347 | INFO     | [payload] validate_post thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:40,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 04:03:32] 2026-04-28 02:02:41,866 | INFO     | [job] queue monitor thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:02:42,966 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 04:03:32] 2026-04-28 02:03:04,311 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-04-28 04:03:32] 2026-04-28 02:03:07,508 | INFO     | PID=3601958 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 04:03:32] 2026-04-28 02:03:07,508 | INFO     | .. there are 15 such processes running
[2026-04-28 04:03:32] 2026-04-28 02:03:07,509 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 04:03:32] 2026-04-28 02:03:07,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 04:03:32] 2026-04-28 02:03:07,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 04:03:32] 2026-04-28 02:03:12,599 | INFO     | [monitor] cgroup control has ended
[2026-04-28 04:03:32] 2026-04-28 02:03:14,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23249346795328)>', '<ExcThread(monitor, started 23249037518592)>']
[2026-04-28 04:03:32] 2026-04-28 02:03:14,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 04:03:32] 2026-04-28 02:03:14,545 | INFO     | [monitor] control thread has ended
[2026-04-28 04:03:32] 2026-04-28 02:03:19,548 | INFO     | all workflow threads have been joined
[2026-04-28 04:03:32] 2026-04-28 02:03:19,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 04:03:32] 2026-04-28 02:03:19,549 | INFO     | traces error code: 0
[2026-04-28 04:03:32] 2026-04-28 02:03:19,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 04:03:32] 2026-04-28 02:03:19,720 [wrapper] ==== pilot stdout END ====
[2026-04-28 04:03:32] 2026-04-28 02:03:19,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 04:03:32] 2026-04-28 02:03:19,724 [wrapper] pilotpid: 3601958
[2026-04-28 04:03:32] 2026-04-28 02:03:19,726 [wrapper] Pilot exit status: 0
[2026-04-28 04:03:32] 2026-04-28 02:03:19,733 [wrapper] pandaids: 7116161000
[2026-04-28 04:03:32] 2026-04-28 02:03:19,836 [wrapper] cleanup supervisor_pilot 3893708 3601959
[2026-04-28 04:03:32] 2026-04-28 02:03:19,839 [wrapper] Test setup, not cleaning
[2026-04-28 04:03:32] 2026-04-28 02:03:19,841 [wrapper] apfmon messages muted
[2026-04-28 04:03:32] 2026-04-28 02:03:19,843 [wrapper] ==== wrapper stdout END ====
[2026-04-28 04:03:32] 2026-04-28 02:03:19,844 [wrapper] ==== wrapper stderr END ====
[2026-04-28 04:03:32]  *** Error codes and diagnostics ***
[2026-04-28 04:03:32]     "exeErrorCode": 0,
[2026-04-28 04:03:32]     "pilotErrorCode": 0,
[2026-04-28 04:03:32]  *** Listing of results directory ***
[2026-04-28 04:03:32] total 472888
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc      5631 Apr 26 20:16 queuedata.json
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc    683926 Apr 26 20:16 pilot3.tar.gz
[2026-04-28 04:03:32] -rwx------. 1 boinc boinc     36322 Apr 26 20:16 runpilot2-wrapper.sh
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc       100 Apr 28 03:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 04:03:32] -rwxr-xr-x. 1 boinc boinc      7986 Apr 28 03:17 run_atlas
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc       105 Apr 28 03:17 job.xml
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc      6630 Apr 28 03:17 init_data.xml
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc 261445668 Apr 28 03:17 EVNT.49863712._000145.pool.root.1
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc     15667 Apr 28 03:17 start_atlas.sh
[2026-04-28 04:03:32] drwxrwx--x. 2 boinc boinc      4096 Apr 28 03:17 shared
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc    697412 Apr 28 03:17 input.tar.gz
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc         0 Apr 28 03:17 boinc_lockfile
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc      2574 Apr 28 03:17 pandaJob.out
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc    997422 Apr 28 03:18 agis_schedconf.cvmfs.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc   1512704 Apr 28 03:18 agis_ddmendpoints.agis.ALL.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc       445 Apr 28 03:18 workernode_map.json
[2026-04-28 04:03:32] drwx------. 5 boinc boinc      4096 Apr 28 03:18 pilot3
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc 217374939 Apr 28 04:02 HITS.49863714._002214.pool.root.1
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc       486 Apr 28 04:02 boinc_task_state.xml
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc      1030 Apr 28 04:02 memory_monitor_summary.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc    344077 Apr 28 04:02 log.49863714._002214.job.log.tgz.1
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc      6369 Apr 28 04:02 heartbeat_new.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc      6260 Apr 28 04:02 heartbeat.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc        95 Apr 28 04:03 pilot_heartbeat.json
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc      5019 Apr 28 04:03 pilotlog.txt
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc    294641 Apr 28 04:03 log.49863714._002214.job.log.1
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc       357 Apr 28 04:03 output.list
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc       410 Apr 28 04:03 runtime_log
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc    655360 Apr 28 04:03 result.tar.gz
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc      8846 Apr 28 04:03 runtime_log.err
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc       660 Apr 28 04:03 569453521b36.diag
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc        27 Apr 28 04:03 wrapper_checkpoint.txt
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc      8192 Apr 28 04:03 boinc_mmap_file
[2026-04-28 04:03:32] -rw-r--r--. 1 boinc boinc     21394 Apr 28 04:03 stderr.txt
[2026-04-28 04:03:32] HITS file was successfully produced:
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc 217374939 Apr 28 04:02 shared/HITS.pool.root.1
[2026-04-28 04:03:32]  *** Contents of shared directory: ***
[2026-04-28 04:03:32] total 468952
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc 261445668 Apr 28 03:17 ATLAS.root_0
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc     15667 Apr 28 03:17 start_atlas.sh
[2026-04-28 04:03:32] -rw-r--r--. 2 boinc boinc    697412 Apr 28 03:17 input.tar.gz
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc 217374939 Apr 28 04:02 HITS.pool.root.1
[2026-04-28 04:03:32] -rw-------. 1 boinc boinc    655360 Apr 28 04:03 result.tar.gz
04:03:33 (3597370): run_atlas exited; CPU time 28779.071646
04:03:33 (3597370): called boinc_finish(0)

</stderr_txt>
]]>


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