Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:08 (2024282): wrapper (7.7.26015): starting
14:43:08 (2024282): wrapper: running run_atlas (--nthreads 3)
[2026-04-27 14:43:08] Arguments: --nthreads 3
[2026-04-27 14:43:08] Threads: 3
[2026-04-27 14:43:08] Checking for CVMFS
[2026-04-27 14:43:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 14:43:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 14:43:09] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 14:43:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 14:43:09] 2.9.2.0 1864501 1252 71600 158927 3 50 34146949 36864001 0 130560 0 609753 99.985 46345 3889 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-27 14:43:09] CVMFS is ok
[2026-04-27 14:43:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 14:43:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 14:43:09] Further information can be found at the LHC@home message board.
[2026-04-27 14:43:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 14:43:09] Checking for apptainer binary...
[2026-04-27 14:43:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 14:43:09] Running /usr/bin/apptainer --version
[2026-04-27 14:43:09] apptainer version 1.4.1-1.1
[2026-04-27 14:43:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 14:43:09] thA327
[2026-04-27 14:43:09] apptainer works
[2026-04-27 14:43:09] Set ATHENA_PROC_NUMBER=3
[2026-04-27 14:43:09] Set ATHENA_CORE_NUMBER=3
[2026-04-27 14:43:09] Starting ATLAS job with PandaID=7116178035
[2026-04-27 14:43:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 17:13:37]  *** The last 200 lines of the pilot log: ***
[2026-04-27 17:13:37] 2026-04-27 15:12:55,470 | INFO     | did not find any defunct processes belonging to 2032745
[2026-04-27 17:13:37] 2026-04-27 15:12:55,470 | INFO     | Ready for new job
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | ***************************************
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | ***************************************
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | 
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | architecture information:
[2026-04-27 17:13:37] 2026-04-27 15:12:55,471 | INFO     | executing command: cat /etc/os-release
[2026-04-27 17:13:37] 2026-04-27 15:12:55,481 | INFO     | cat /etc/os-release:
[2026-04-27 17:13:37] NAME="CentOS Linux"
[2026-04-27 17:13:37] VERSION="7 (Core)"
[2026-04-27 17:13:37] ID="centos"
[2026-04-27 17:13:37] ID_LIKE="rhel fedora"
[2026-04-27 17:13:37] VERSION_ID="7"
[2026-04-27 17:13:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 17:13:37] ANSI_COLOR="0;31"
[2026-04-27 17:13:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 17:13:37] HOME_URL="https://www.centos.org/"
[2026-04-27 17:13:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 17:13:37] 
[2026-04-27 17:13:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 17:13:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 17:13:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 17:13:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 17:13:37] 
[2026-04-27 17:13:37] 2026-04-27 15:12:55,481 | INFO     | ***************************************
[2026-04-27 17:13:37] 2026-04-27 15:12:55,985 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-27 17:13:37] 2026-04-27 15:12:55,998 | INFO     | sufficient remaining disk space (362808344576 B)
[2026-04-27 17:13:37] 2026-04-27 15:12:55,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 17:13:37] 2026-04-27 15:12:55,999 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 17:13:37] 2026-04-27 15:12:55,999 | INFO     | update_server=False
[2026-04-27 17:13:37] 2026-04-27 15:12:55,999 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 17:13:37] 2026-04-27 15:12:55,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 17:13:37] 2026-04-27 15:12:56,306 | INFO     | all data control threads have been joined
[2026-04-27 17:13:37] 2026-04-27 15:12:56,472 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 17:13:37] 2026-04-27 15:12:56,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 17:13:37] 2026-04-27 15:12:56,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 17:13:37] 2026-04-27 15:12:56,472 | INFO     | will abort loop
[2026-04-27 17:13:37] 2026-04-27 15:12:56,494 | INFO     | all payload control threads have been joined
[2026-04-27 17:13:37] 2026-04-27 15:12:57,005 | INFO     | [job] retrieve thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,005 | INFO     | [job] queue monitor thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,047 | INFO     | [payload] failed_post thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 17:13:37] 2026-04-27 15:12:57,113 | INFO     | all job control threads have been joined
[2026-04-27 17:13:37] 2026-04-27 15:12:57,311 | INFO     | [data] control thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,474 | INFO     | [job] job monitor thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,499 | INFO     | [payload] control thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:57,550 | INFO     | [payload] validate_post thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,102 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,118 | INFO     | [job] control thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,163 | INFO     | [job] validate thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,250 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 17:13:37] 2026-04-27 15:12:58,349 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:58,503 | INFO     | [data] copytool_in thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:12:59,080 | INFO     | [data] copytool_out thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:13:02,341 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:13:06,429 | INFO     | job.realtimelogging is not enabled
[2026-04-27 17:13:37] 2026-04-27 15:13:07,435 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 17:13:37] 2026-04-27 15:13:16,565 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-04-27 17:13:37] 2026-04-27 15:13:25,914 | INFO     | PID=2028321 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 17:13:37] 2026-04-27 15:13:25,914 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 17:13:37] 2026-04-27 15:13:25,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 17:13:37] 2026-04-27 15:13:25,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 17:13:37] 2026-04-27 15:13:29,826 | INFO     | [monitor] cgroup control has ended
[2026-04-27 17:13:37] 2026-04-27 15:13:31,861 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956639520576)>', '<ExcThread(monitor, started 139955804305152)>']
[2026-04-27 17:13:37] 2026-04-27 15:13:31,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 17:13:37] 2026-04-27 15:13:31,943 | INFO     | [monitor] control thread has ended
[2026-04-27 17:13:37] 2026-04-27 15:13:36,887 | INFO     | all workflow threads have been joined
[2026-04-27 17:13:37] 2026-04-27 15:13:36,887 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 17:13:37] 2026-04-27 15:13:36,887 | INFO     | traces error code: 0
[2026-04-27 17:13:37] 2026-04-27 15:13:36,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 17:13:37] 2026-04-27 15:13:36,938 [wrapper] ==== pilot stdout END ====
[2026-04-27 17:13:37] 2026-04-27 15:13:36,940 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 17:13:37] 2026-04-27 15:13:36,943 [wrapper] pilotpid: 2028321
[2026-04-27 17:13:37] 2026-04-27 15:13:36,946 [wrapper] Pilot exit status: 0
[2026-04-27 17:13:37] 2026-04-27 15:13:36,954 [wrapper] pandaids: 7116178035
[2026-04-27 17:13:37] 2026-04-27 15:13:36,970 [wrapper] cleanup supervisor_pilot 2039028 2028322
[2026-04-27 17:13:37] 2026-04-27 15:13:36,973 [wrapper] Test setup, not cleaning
[2026-04-27 17:13:37] 2026-04-27 15:13:36,975 [wrapper] apfmon messages muted
[2026-04-27 17:13:37] 2026-04-27 15:13:36,978 [wrapper] ==== wrapper stdout END ====
[2026-04-27 17:13:37] 2026-04-27 15:13:36,980 [wrapper] ==== wrapper stderr END ====
[2026-04-27 17:13:37]  *** Error codes and diagnostics ***
[2026-04-27 17:13:37]     "exeErrorCode": 0,
[2026-04-27 17:13:37]     "pilotErrorCode": 0,
[2026-04-27 17:13:37]  *** Listing of results directory ***
[2026-04-27 17:13:37] total 2441028
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc     683926 Apr 26 23:08 pilot3.tar.gz
[2026-04-27 17:13:37] -rwx------ 1 boinc boinc      36322 Apr 26 23:09 runpilot2-wrapper.sh
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       5631 Apr 26 23:12 queuedata.json
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc        100 Apr 27 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 17:13:37] -rwxr-xr-x 1 boinc boinc       7986 Apr 27 14:43 run_atlas
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc        105 Apr 27 14:43 job.xml
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc 2222531964 Apr 27 14:43 EVNT.49820242._000013.pool.root.1
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc     697410 Apr 27 14:43 input.tar.gz
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc      15667 Apr 27 14:43 start_atlas.sh
[2026-04-27 17:13:37] drwxrwx--x 2 boinc boinc       4096 Apr 27 14:43 shared
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc          0 Apr 27 14:43 boinc_setup_complete
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       6361 Apr 27 14:43 init_data.xml
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc          0 Apr 27 14:43 boinc_lockfile
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       2548 Apr 27 14:43 pandaJob.out
[2026-04-27 17:13:37] -rw------- 1 boinc boinc     996913 Apr 27 14:43 agis_schedconf.cvmfs.json
[2026-04-27 17:13:37] -rw------- 1 boinc boinc    1508585 Apr 27 14:43 agis_ddmendpoints.agis.ALL.json
[2026-04-27 17:13:37] -rw------- 1 boinc boinc        422 Apr 27 14:43 workernode_map.json
[2026-04-27 17:13:37] drwx------ 5 boinc boinc       4096 Apr 27 14:43 pilot3
[2026-04-27 17:13:37] -rw------- 1 boinc boinc  270470255 Apr 27 17:12 HITS.49820244._017076.pool.root.1
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc        488 Apr 27 17:12 boinc_task_state.xml
[2026-04-27 17:13:37] -rw------- 1 boinc boinc       1022 Apr 27 17:12 memory_monitor_summary.json
[2026-04-27 17:13:37] -rw------- 1 boinc boinc     400761 Apr 27 17:12 log.49820244._017076.job.log.tgz.1
[2026-04-27 17:13:37] -rw------- 1 boinc boinc       6320 Apr 27 17:12 heartbeat_new.json
[2026-04-27 17:13:37] -rw------- 1 boinc boinc       6211 Apr 27 17:12 heartbeat.json
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       8192 Apr 27 17:13 boinc_mmap_file
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc         27 Apr 27 17:13 wrapper_checkpoint.txt
[2026-04-27 17:13:37] -rw------- 1 boinc boinc         95 Apr 27 17:13 pilot_heartbeat.json
[2026-04-27 17:13:37] -rw------- 1 boinc boinc       5009 Apr 27 17:13 pilotlog.txt
[2026-04-27 17:13:37] -rw------- 1 boinc boinc     844150 Apr 27 17:13 log.49820244._017076.job.log.1
[2026-04-27 17:13:37] -rw------- 1 boinc boinc        357 Apr 27 17:13 output.list
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc        410 Apr 27 17:13 runtime_log
[2026-04-27 17:13:37] -rw------- 1 boinc boinc    1259520 Apr 27 17:13 result.tar.gz
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       8519 Apr 27 17:13 runtime_log.err
[2026-04-27 17:13:37] -rw------- 1 boinc boinc        658 Apr 27 17:13 7ef8b15a15e7.diag
[2026-04-27 17:13:37] -rw-r--r-- 1 boinc boinc       9847 Apr 27 17:13 stderr.txt
[2026-04-27 17:13:37] HITS file was successfully produced:
[2026-04-27 17:13:37] -rw------- 1 boinc boinc 270470255 Apr 27 17:12 shared/HITS.pool.root.1
[2026-04-27 17:13:37]  *** Contents of shared directory: ***
[2026-04-27 17:13:37] total 2436516
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc 2222531964 Apr 27 14:43 ATLAS.root_0
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc     697410 Apr 27 14:43 input.tar.gz
[2026-04-27 17:13:37] -rw-r--r-- 2 boinc boinc      15667 Apr 27 14:43 start_atlas.sh
[2026-04-27 17:13:37] -rw------- 1 boinc boinc  270470255 Apr 27 17:12 HITS.pool.root.1
[2026-04-27 17:13:37] -rw------- 1 boinc boinc    1259520 Apr 27 17:13 result.tar.gz
17:13:38 (2024282): run_atlas exited; CPU time 25410.018877
17:13:38 (2024282): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN