Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:48 (27963): wrapper (7.7.26015): starting
15:15:48 (27963): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 15:15:48] Arguments: --nthreads 8
[2026-04-27 15:15:48] Threads: 8
[2026-04-27 15:15:48] Checking for CVMFS
[2026-04-27 15:15:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 15:15:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 15:15:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 15:15:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 15:15:55] 2.11.2.0 24173 17085 99156 158927 1 54 24050505 25165825 96 130560 0 7113991 99.854 6010339 12924 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-27 15:15:55] CVMFS is ok
[2026-04-27 15:15:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 15:15:55] Checking for apptainer binary...
[2026-04-27 15:15:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 15:15:55] Running /usr/bin/apptainer --version
[2026-04-27 15:15:55] apptainer version 1.3.2-1.el7
[2026-04-27 15:15:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 15:16:11] cg-vwn464.simple-grid.lan
[2026-04-27 15:16:11] apptainer works
[2026-04-27 15:16:11] Set ATHENA_PROC_NUMBER=8
[2026-04-27 15:16:11] Set ATHENA_CORE_NUMBER=8
[2026-04-27 15:16:12] Starting ATLAS job with PandaID=7116190792
[2026-04-27 15:16:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 22:07:38]  *** The last 200 lines of the pilot log: ***
[2026-04-27 22:07:38] 2026-04-27 20:07:04,876 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 22:07:38] 2026-04-27 20:07:04,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 22:07:38] 2026-04-27 20:07:04,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 22:07:38] 2026-04-27 20:07:04,883 | INFO     | fitting pss+swap vs Time
[2026-04-27 22:07:38] 2026-04-27 20:07:04,884 | INFO     | sum of square deviations: 18535566140.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,889 | INFO     | sum of deviations: 305550672376.00006
[2026-04-27 22:07:38] 2026-04-27 20:07:04,889 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,889 | INFO     | mean y: 2489220.074168798
[2026-04-27 22:07:38] 2026-04-27 20:07:04,889 | INFO     | intersect: 2489220.074168798
[2026-04-27 22:07:38] 2026-04-27 20:07:04,890 | INFO     | chi2: 11.729263036047833
[2026-04-27 22:07:38] 2026-04-27 20:07:04,891 | INFO     | sum of square deviations: 17833534372.5
[2026-04-27 22:07:38] 2026-04-27 20:07:04,895 | INFO     | sum of deviations: 329537112139.99976
[2026-04-27 22:07:38] 2026-04-27 20:07:04,895 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,896 | INFO     | mean y: 2494366.585492228
[2026-04-27 22:07:38] 2026-04-27 20:07:04,896 | INFO     | intersect: 2494366.585492228
[2026-04-27 22:07:38] 2026-04-27 20:07:04,897 | INFO     | chi2: 10.930945237435274
[2026-04-27 22:07:38] 2026-04-27 20:07:04,897 | INFO     | current chi2=10.930945237435274 (change=6.806205949675342 %)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,897 | INFO     | right removable region: 385
[2026-04-27 22:07:38] 2026-04-27 20:07:04,897 | INFO     | sum of square deviations: 17833534372.5
[2026-04-27 22:07:38] 2026-04-27 20:07:04,902 | INFO     | sum of deviations: 157962753160.5
[2026-04-27 22:07:38] 2026-04-27 20:07:04,902 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,902 | INFO     | mean y: 2521280.577720207
[2026-04-27 22:07:38] 2026-04-27 20:07:04,902 | INFO     | intersect: 2521280.577720207
[2026-04-27 22:07:38] 2026-04-27 20:07:04,903 | INFO     | chi2: 6.106742227475723
[2026-04-27 22:07:38] 2026-04-27 20:07:04,903 | INFO     | current chi2=6.106742227475723 (change=47.93584039587379 %)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,904 | INFO     | sum of square deviations: 17149456430.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,908 | INFO     | sum of deviations: 33499529576.000004
[2026-04-27 22:07:38] 2026-04-27 20:07:04,908 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,908 | INFO     | mean y: 2549019.5774278217
[2026-04-27 22:07:38] 2026-04-27 20:07:04,908 | INFO     | intersect: 2549019.5774278217
[2026-04-27 22:07:38] 2026-04-27 20:07:04,909 | INFO     | chi2: 2.377561635967424
[2026-04-27 22:07:38] 2026-04-27 20:07:04,909 | INFO     | current chi2=2.377561635967424 (change=61.0666121574578 %)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,910 | INFO     | sum of square deviations: 16483099750.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,914 | INFO     | sum of deviations: -34904263928.00001
[2026-04-27 22:07:38] 2026-04-27 20:07:04,914 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,914 | INFO     | mean y: 2564617.829787234
[2026-04-27 22:07:38] 2026-04-27 20:07:04,915 | INFO     | intersect: 2564617.829787234
[2026-04-27 22:07:38] 2026-04-27 20:07:04,916 | INFO     | chi2: 1.021330688156715
[2026-04-27 22:07:38] 2026-04-27 20:07:04,916 | INFO     | current chi2=1.021330688156715 (change=57.042935387829054 %)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,916 | INFO     | sum of square deviations: 15834231770.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,921 | INFO     | sum of deviations: -42401281780.00001
[2026-04-27 22:07:38] 2026-04-27 20:07:04,921 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,921 | INFO     | mean y: 2566379.436657682
[2026-04-27 22:07:38] 2026-04-27 20:07:04,921 | INFO     | intersect: 2566379.436657682
[2026-04-27 22:07:38] 2026-04-27 20:07:04,922 | INFO     | chi2: 1.0048282322389332
[2026-04-27 22:07:38] 2026-04-27 20:07:04,922 | INFO     | current chi2=1.0048282322389332 (change=1.6157798947141395 %)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,922 | INFO     | left removable region: 20
[2026-04-27 22:07:38] 2026-04-27 20:07:04,923 | INFO     | sum of square deviations: 15078347830.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,926 | INFO     | sum of deviations: -15304174954.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,927 | INFO     | mean x (centered): 0.0
[2026-04-27 22:07:38] 2026-04-27 20:07:04,927 | INFO     | mean y: 2572850.7095890413
[2026-04-27 22:07:38] 2026-04-27 20:07:04,927 | INFO     | intersect: 2572850.7095890413
[2026-04-27 22:07:38] 2026-04-27 20:07:04,928 | INFO     | chi2: 0.1122500762740913
[2026-04-27 22:07:38] 2026-04-27 20:07:04,928 | INFO     | current memory leak: -1.01 B/s (using 365 data points, chi2=0.11)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,929 | INFO     | could have reported an average CPU frequency of 2250 MHz (17 samples)
[2026-04-27 22:07:38] 2026-04-27 20:07:04,929 | INFO     | ..............................
[2026-04-27 22:07:38] 2026-04-27 20:07:04,929 | INFO     | . Timing measurements:
[2026-04-27 22:07:38] 2026-04-27 20:07:04,929 | INFO     | . get job = 0 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . initial setup = 140 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . payload setup = 264 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . stage-in = 0 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . payload execution = 23976 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . stage-out = 1 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | . log creation = 0 s
[2026-04-27 22:07:38] 2026-04-27 20:07:04,930 | INFO     | ..............................
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | 
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | job summary report
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | --------------------------------------------------
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | PanDA job id: 7116190792
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | task id: 49820375
[2026-04-27 22:07:38] 2026-04-27 20:07:05,037 | INFO     | errors: (none)
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | pilot state: finished 
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | transexitcode: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | exeerrorcode: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | exeerrordiag: 
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | exitcode: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | exitmsg: OK
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | cpuconsumptiontime: 93552 s
[2026-04-27 22:07:38] 2026-04-27 20:07:05,038 | INFO     | nevents: 400
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | neventsw: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | pid: 4014
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | pgrp: 4014
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | corecount: 8
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | event service: False
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | sizes: {0: 2273658, 1: 2246020, 2: 2276173, 24244: 2311271, 24247: 2326617, 24250: 2326673, 24252: 2327059}
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | --------------------------------------------------
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | 
[2026-04-27 22:07:38] 2026-04-27 20:07:05,039 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-04-27 22:07:38] 2026-04-27 20:07:05,073 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 22:07:38] 2026-04-27 20:07:05,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 22:07:38] 2026-04-27 20:07:05,076 | INFO     | job 7116190792 has completed (purged errors)
[2026-04-27 22:07:38] 2026-04-27 20:07:05,076 | INFO     | overall cleanup function is called
[2026-04-27 22:07:38] 2026-04-27 20:07:06,085 | INFO     | --- collectZombieJob: --- 10, [4014]
[2026-04-27 22:07:38] 2026-04-27 20:07:06,085 | INFO     | zombie collector waiting for pid 4014
[2026-04-27 22:07:38] 2026-04-27 20:07:06,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 22:07:38] 2026-04-27 20:07:06,086 | INFO     | collected zombie processes
[2026-04-27 22:07:38] 2026-04-27 20:07:06,086 | INFO     | will attempt to kill all subprocesses of pid=4014
[2026-04-27 22:07:38] 2026-04-27 20:07:06,153 | INFO     | process IDs to be killed: [4014] (in reverse order)
[2026-04-27 22:07:38] 2026-04-27 20:07:06,205 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 22:07:38] 2026-04-27 20:07:06,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 22:07:38] 2026-04-27 20:07:06,207 | INFO     | did not find any defunct processes belonging to 4014
[2026-04-27 22:07:38] 2026-04-27 20:07:06,208 | INFO     | did not find any defunct processes belonging to 4014
[2026-04-27 22:07:38] 2026-04-27 20:07:06,209 | INFO     | Ready for new job
[2026-04-27 22:07:38] 2026-04-27 20:07:06,211 | INFO     | ***************************************
[2026-04-27 22:07:38] 2026-04-27 20:07:06,211 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 22:07:38] 2026-04-27 20:07:06,211 | INFO     | ***************************************
[2026-04-27 22:07:38] 2026-04-27 20:07:06,211 | INFO     | 
[2026-04-27 22:07:38] 2026-04-27 20:07:06,212 | INFO     | pilot is running in a VM
[2026-04-27 22:07:38] 2026-04-27 20:07:06,212 | INFO     | architecture information:
[2026-04-27 22:07:38] 2026-04-27 20:07:06,213 | INFO     | executing command: cat /etc/os-release
[2026-04-27 22:07:38] 2026-04-27 20:07:06,237 | INFO     | cat /etc/os-release:
[2026-04-27 22:07:38] NAME="CentOS Linux"
[2026-04-27 22:07:38] VERSION="7 (Core)"
[2026-04-27 22:07:38] ID="centos"
[2026-04-27 22:07:38] ID_LIKE="rhel fedora"
[2026-04-27 22:07:38] VERSION_ID="7"
[2026-04-27 22:07:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 22:07:38] ANSI_COLOR="0;31"
[2026-04-27 22:07:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 22:07:38] HOME_URL="https://www.centos.org/"
[2026-04-27 22:07:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 22:07:38] 
[2026-04-27 22:07:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 22:07:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 22:07:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 22:07:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 22:07:38] 
[2026-04-27 22:07:38] 2026-04-27 20:07:06,238 | INFO     | ***************************************
[2026-04-27 22:07:38] 2026-04-27 20:07:06,741 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-04-27 22:07:38] 2026-04-27 20:07:06,766 | INFO     | sufficient remaining disk space (489947136000 B)
[2026-04-27 22:07:38] 2026-04-27 20:07:06,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 22:07:38] 2026-04-27 20:07:06,766 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 22:07:38] 2026-04-27 20:07:06,766 | INFO     | update_server=False
[2026-04-27 22:07:38] 2026-04-27 20:07:06,767 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 22:07:38] 2026-04-27 20:07:06,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:07:38] 2026-04-27 20:07:06,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 22:07:38] 2026-04-27 20:07:07,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:07:38] 2026-04-27 20:07:07,031 | INFO     | aborting loop
[2026-04-27 22:07:38] 2026-04-27 20:07:07,248 | INFO     | all payload control threads have been joined
[2026-04-27 22:07:38] 2026-04-27 20:07:07,772 | INFO     | [job] retrieve thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:07,773 | INFO     | [job] queue monitor thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:07,805 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:07,839 | INFO     | all data control threads have been joined
[2026-04-27 22:07:38] 2026-04-27 20:07:07,874 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:07,939 | INFO     | all job control threads have been joined
[2026-04-27 22:07:38] 2026-04-27 20:07:08,037 | INFO     | [job] job monitor thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,253 | INFO     | [payload] control thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,285 | INFO     | [payload] failed_post thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,531 | INFO     | [payload] validate_post thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,774 | INFO     | [data] copytool_out thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,844 | INFO     | [data] control thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,906 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,941 | INFO     | [data] copytool_in thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:08,945 | INFO     | [job] control thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:09,048 | INFO     | [job] validate thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:09,048 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:09,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 22:07:38] 2026-04-27 20:07:13,069 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 22:07:38] 2026-04-27 20:07:32,079 | INFO     | [monitor] cgroup control has ended
[2026-04-27 22:07:38] 2026-04-27 20:07:33,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754465675072)>', '<ExcThread(monitor, started 139753739515648)>']
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | INFO     | PID=31946 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | INFO     | .. there are 2 such processes running
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 22:07:38] 2026-04-27 20:07:36,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 22:07:38] 2026-04-27 20:07:36,866 | INFO     | [monitor] control thread has ended
[2026-04-27 22:07:38] 2026-04-27 20:07:38,181 | INFO     | all workflow threads have been joined
[2026-04-27 22:07:38] 2026-04-27 20:07:38,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 22:07:38] 2026-04-27 20:07:38,182 | INFO     | traces error code: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:38,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 22:07:38] 2026-04-27 20:07:38,321 [wrapper] ==== pilot stdout END ====
[2026-04-27 22:07:38] 2026-04-27 20:07:38,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 22:07:38] 2026-04-27 20:07:38,335 [wrapper] pilotpid: 31946
[2026-04-27 22:07:38] 2026-04-27 20:07:38,340 [wrapper] Pilot exit status: 0
[2026-04-27 22:07:38] 2026-04-27 20:07:38,368 [wrapper] pandaids: 7116190792
[2026-04-27 22:07:38] 2026-04-27 20:07:38,403 [wrapper] cleanup supervisor_pilot 12690 31947
[2026-04-27 22:07:38] 2026-04-27 20:07:38,408 [wrapper] Test setup, not cleaning
[2026-04-27 22:07:38] 2026-04-27 20:07:38,417 [wrapper] apfmon messages muted
[2026-04-27 22:07:38] 2026-04-27 20:07:38,423 [wrapper] ==== wrapper stdout END ====
[2026-04-27 22:07:38] 2026-04-27 20:07:38,427 [wrapper] ==== wrapper stderr END ====
[2026-04-27 22:07:38]  *** Error codes and diagnostics ***
[2026-04-27 22:07:38]     "exeErrorCode": 0,
[2026-04-27 22:07:38]     "pilotErrorCode": 0,
[2026-04-27 22:07:38]  *** Listing of results directory ***
[2026-04-27 22:07:38] total 2471028
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc       5631 Apr 26 23:06 queuedata.json
[2026-04-27 22:07:38] -rwx------. 1 boinc boinc      36322 Apr 26 23:06 runpilot2-wrapper.sh
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc     683926 Apr 26 23:08 pilot3.tar.gz
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc        100 Apr 27 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 22:07:38] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 15:15 run_atlas
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc        105 Apr 27 15:15 job.xml
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc       6307 Apr 27 15:15 init_data.xml
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc 2247608693 Apr 27 15:15 EVNT.49820373._000034.pool.root.1
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc      15667 Apr 27 15:15 start_atlas.sh
[2026-04-27 22:07:38] drwxrwx--x. 2 boinc boinc         68 Apr 27 15:15 shared
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc     697428 Apr 27 15:15 input.tar.gz
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc          0 Apr 27 15:15 boinc_lockfile
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc       2584 Apr 27 15:16 pandaJob.out
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc        413 Apr 27 15:22 workernode_map.json
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc     996913 Apr 27 15:22 agis_schedconf.cvmfs.json
[2026-04-27 22:07:38] drwx------. 5 boinc boinc       4096 Apr 27 15:22 pilot3
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc  272928484 Apr 27 22:06 HITS.49820375._014835.pool.root.1
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc        490 Apr 27 22:06 boinc_task_state.xml
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc       1019 Apr 27 22:06 memory_monitor_summary.json
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc         95 Apr 27 22:06 pilot_heartbeat.json
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc    1512704 Apr 27 22:06 agis_ddmendpoints.agis.ALL.json
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc     611493 Apr 27 22:07 log.49820375._014835.job.log.tgz.1
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc       6342 Apr 27 22:07 heartbeat_new.json
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc       6233 Apr 27 22:07 heartbeat.json
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc       8192 Apr 27 22:07 boinc_mmap_file
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc         28 Apr 27 22:07 wrapper_checkpoint.txt
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc       4884 Apr 27 22:07 pilotlog.txt
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc    2225161 Apr 27 22:07 log.49820375._014835.job.log.1
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc        357 Apr 27 22:07 output.list
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc        410 Apr 27 22:07 runtime_log
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc    2856960 Apr 27 22:07 result.tar.gz
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc       8455 Apr 27 22:07 runtime_log.err
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc        656 Apr 27 22:07 7e5d5f59c8e7.diag
[2026-04-27 22:07:38] -rw-r--r--. 1 boinc boinc      20461 Apr 27 22:07 stderr.txt
[2026-04-27 22:07:38] HITS file was successfully produced:
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc 272928484 Apr 27 22:06 shared/HITS.pool.root.1
[2026-04-27 22:07:38]  *** Contents of shared directory: ***
[2026-04-27 22:07:38] total 2464956
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc 2247608693 Apr 27 15:15 ATLAS.root_0
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc      15667 Apr 27 15:15 start_atlas.sh
[2026-04-27 22:07:38] -rw-r--r--. 2 boinc boinc     697428 Apr 27 15:15 input.tar.gz
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc  272928484 Apr 27 22:06 HITS.pool.root.1
[2026-04-27 22:07:38] -rw-------. 1 boinc boinc    2856960 Apr 27 22:07 result.tar.gz
22:07:39 (27963): run_atlas exited; CPU time 93777.436650
22:07:39 (27963): called boinc_finish(0)

</stderr_txt>
]]>

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