Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:00 (22557): wrapper (7.7.26015): starting
16:10:00 (22557): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 16:10:00] Arguments: --nthreads 8
[2026-04-27 16:10:00] Threads: 8
[2026-04-27 16:10:00] Checking for CVMFS
[2026-04-27 16:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 16:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 16:10:05] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 16:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 16:10:07] 2.11.2.0 10636 17106 102232 158929 3 53 14125209 25165825 96 130560 0 6135437 99.890 5119942 11851 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-27 16:10:07] CVMFS is ok
[2026-04-27 16:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 16:10:07] Checking for apptainer binary...
[2026-04-27 16:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 16:10:07] Running /usr/bin/apptainer --version
[2026-04-27 16:10:07] apptainer version 1.3.2-1.el7
[2026-04-27 16:10:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 16:10:37] cg-vwn366.simple-grid.lan
[2026-04-27 16:10:37] apptainer works
[2026-04-27 16:10:37] Set ATHENA_PROC_NUMBER=8
[2026-04-27 16:10:37] Set ATHENA_CORE_NUMBER=8
[2026-04-27 16:10:37] Starting ATLAS job with PandaID=7116197135
[2026-04-27 16:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 23:41:19]  *** The last 200 lines of the pilot log: ***
[2026-04-27 23:41:19] 2026-04-27 21:40:18,960 | INFO     | this job has now completed (state=finished)
[2026-04-27 23:41:19] 2026-04-27 21:40:18,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 23:41:19] 2026-04-27 21:40:18,960 | INFO     | log transfer has been attempted: DONE
[2026-04-27 23:41:19] 2026-04-27 21:40:18,960 | INFO     | job 7116197135 has finished - writing final server update
[2026-04-27 23:41:19] 2026-04-27 21:40:18,960 | INFO     | total number of processed events: 400 (read)
[2026-04-27 23:41:19] 2026-04-27 21:40:18,963 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7116197135/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 23:41:19] 2026-04-27 21:40:18,963 | INFO     | extracted standard info from prmon json
[2026-04-27 23:41:19] 2026-04-27 21:40:18,963 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 23:41:19] 2026-04-27 21:40:18,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 23:41:19] 2026-04-27 21:40:18,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 23:41:19] 2026-04-27 21:40:18,976 | INFO     | fitting pss+swap vs Time
[2026-04-27 23:41:19] 2026-04-27 21:40:18,977 | INFO     | sum of square deviations: 24653662247.5
[2026-04-27 23:41:19] 2026-04-27 21:40:18,983 | INFO     | sum of deviations: 177135090401.00003
[2026-04-27 23:41:19] 2026-04-27 21:40:18,983 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:18,983 | INFO     | mean y: 2513422.465116279
[2026-04-27 23:41:19] 2026-04-27 21:40:18,983 | INFO     | intersect: 2513422.465116279
[2026-04-27 23:41:19] 2026-04-27 21:40:18,984 | INFO     | chi2: 11.169036269818504
[2026-04-27 23:41:19] 2026-04-27 21:40:18,985 | INFO     | sum of square deviations: 23803609100.0
[2026-04-27 23:41:19] 2026-04-27 21:40:18,991 | INFO     | sum of deviations: 234865091765.99994
[2026-04-27 23:41:19] 2026-04-27 21:40:18,991 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:18,991 | INFO     | mean y: 2523703.2588235294
[2026-04-27 23:41:19] 2026-04-27 21:40:18,991 | INFO     | intersect: 2523703.2588235294
[2026-04-27 23:41:19] 2026-04-27 21:40:18,992 | INFO     | chi2: 9.624605369893642
[2026-04-27 23:41:19] 2026-04-27 21:40:18,992 | INFO     | current chi2=9.624605369893642 (change=13.82779017468406 %)
[2026-04-27 23:41:19] 2026-04-27 21:40:18,992 | INFO     | right removable region: 424
[2026-04-27 23:41:19] 2026-04-27 21:40:18,993 | INFO     | sum of square deviations: 23803609100.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,003 | INFO     | sum of deviations: 13713738119.00024
[2026-04-27 23:41:19] 2026-04-27 21:40:19,003 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,003 | INFO     | mean y: 2542740.0752941174
[2026-04-27 23:41:19] 2026-04-27 21:40:19,003 | INFO     | intersect: 2542740.0752941174
[2026-04-27 23:41:19] 2026-04-27 21:40:19,004 | INFO     | chi2: 5.737270557237022
[2026-04-27 23:41:19] 2026-04-27 21:40:19,004 | INFO     | current chi2=5.737270557237022 (change=48.63235807783573 %)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,005 | INFO     | sum of square deviations: 22973323765.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,011 | INFO     | sum of deviations: -114666514913.00002
[2026-04-27 23:41:19] 2026-04-27 21:40:19,011 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,011 | INFO     | mean y: 2566306.285714286
[2026-04-27 23:41:19] 2026-04-27 21:40:19,011 | INFO     | intersect: 2566306.285714286
[2026-04-27 23:41:19] 2026-04-27 21:40:19,012 | INFO     | chi2: 2.5364929713258704
[2026-04-27 23:41:19] 2026-04-27 21:40:19,012 | INFO     | current chi2=2.5364929713258704 (change=55.789204186539095 %)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,013 | INFO     | sum of square deviations: 22162573680.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,018 | INFO     | sum of deviations: -155386040967.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,019 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,019 | INFO     | mean y: 2573930.028915663
[2026-04-27 23:41:19] 2026-04-27 21:40:19,019 | INFO     | intersect: 2573930.028915663
[2026-04-27 23:41:19] 2026-04-27 21:40:19,019 | INFO     | chi2: 2.0104919683887297
[2026-04-27 23:41:19] 2026-04-27 21:40:19,020 | INFO     | current chi2=2.0104919683887297 (change=20.73733335291643 %)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,020 | INFO     | left removable region: 15
[2026-04-27 23:41:19] 2026-04-27 21:40:19,020 | INFO     | sum of square deviations: 21215132660.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,037 | INFO     | sum of deviations: -95772044476.00002
[2026-04-27 23:41:19] 2026-04-27 21:40:19,037 | INFO     | mean x (centered): 0.0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,038 | INFO     | mean y: 2585335.325183374
[2026-04-27 23:41:19] 2026-04-27 21:40:19,038 | INFO     | intersect: 2585335.325183374
[2026-04-27 23:41:19] 2026-04-27 21:40:19,038 | INFO     | chi2: 0.32492091221464886
[2026-04-27 23:41:19] 2026-04-27 21:40:19,039 | INFO     | current memory leak: -4.51 B/s (using 409 data points, chi2=0.32)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,039 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | ..............................
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . Timing measurements:
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . get job = 0 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . initial setup = 118 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . payload setup = 169 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . stage-in = 0 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . payload execution = 26324 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,040 | INFO     | . stage-out = 4 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,041 | INFO     | . log creation = 1 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,041 | INFO     | ..............................
[2026-04-27 23:41:19] 2026-04-27 21:40:19,197 | INFO     | 
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | job summary report
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | --------------------------------------------------
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | PanDA job id: 7116197135
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | task id: 49820244
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | errors: (none)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | pilot state: finished 
[2026-04-27 23:41:19] 2026-04-27 21:40:19,198 | INFO     | transexitcode: 0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | exeerrorcode: 0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | exeerrordiag: 
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | exitcode: 0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | exitmsg: OK
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | cpuconsumptiontime: 101064 s
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | nevents: 400
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | neventsw: 0
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | pid: 30993
[2026-04-27 23:41:19] 2026-04-27 21:40:19,199 | INFO     | pgrp: 30993
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | corecount: 8
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | event service: False
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | sizes: {0: 2273671, 1: 2274356, 2: 2252643, 3: 2276213, 13: 2276213, 26498: 2312754, 26503: 2328154, 26504: 2328292}
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | --------------------------------------------------
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | 
[2026-04-27 23:41:19] 2026-04-27 21:40:19,200 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-27 23:41:19] 2026-04-27 21:40:19,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,943 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,943 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 23:41:19] 2026-04-27 21:40:19,946 | INFO     | job 7116197135 has completed (purged errors)
[2026-04-27 23:41:19] 2026-04-27 21:40:19,946 | INFO     | overall cleanup function is called
[2026-04-27 23:41:19] 2026-04-27 21:40:20,954 | INFO     | --- collectZombieJob: --- 10, [30993]
[2026-04-27 23:41:19] 2026-04-27 21:40:20,955 | INFO     | zombie collector waiting for pid 30993
[2026-04-27 23:41:19] 2026-04-27 21:40:20,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 23:41:19] 2026-04-27 21:40:20,955 | INFO     | collected zombie processes
[2026-04-27 23:41:19] 2026-04-27 21:40:20,955 | INFO     | will attempt to kill all subprocesses of pid=30993
[2026-04-27 23:41:19] 2026-04-27 21:40:21,017 | INFO     | process IDs to be killed: [30993] (in reverse order)
[2026-04-27 23:41:19] 2026-04-27 21:40:22,078 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 23:41:19] 2026-04-27 21:40:22,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 23:41:19] 2026-04-27 21:40:22,080 | INFO     | did not find any defunct processes belonging to 30993
[2026-04-27 23:41:19] 2026-04-27 21:40:22,082 | INFO     | did not find any defunct processes belonging to 30993
[2026-04-27 23:41:19] 2026-04-27 21:40:22,082 | INFO     | Ready for new job
[2026-04-27 23:41:19] 2026-04-27 21:40:22,084 | INFO     | ***************************************
[2026-04-27 23:41:19] 2026-04-27 21:40:22,085 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 23:41:19] 2026-04-27 21:40:22,085 | INFO     | ***************************************
[2026-04-27 23:41:19] 2026-04-27 21:40:22,085 | INFO     | 
[2026-04-27 23:41:19] 2026-04-27 21:40:22,085 | INFO     | pilot is running in a VM
[2026-04-27 23:41:19] 2026-04-27 21:40:22,086 | INFO     | architecture information:
[2026-04-27 23:41:19] 2026-04-27 21:40:22,097 | INFO     | executing command: cat /etc/os-release
[2026-04-27 23:41:19] 2026-04-27 21:40:22,377 | INFO     | cat /etc/os-release:
[2026-04-27 23:41:19] NAME="CentOS Linux"
[2026-04-27 23:41:19] VERSION="7 (Core)"
[2026-04-27 23:41:19] ID="centos"
[2026-04-27 23:41:19] ID_LIKE="rhel fedora"
[2026-04-27 23:41:19] VERSION_ID="7"
[2026-04-27 23:41:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 23:41:19] ANSI_COLOR="0;31"
[2026-04-27 23:41:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 23:41:19] HOME_URL="https://www.centos.org/"
[2026-04-27 23:41:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 23:41:19] 
[2026-04-27 23:41:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 23:41:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 23:41:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 23:41:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 23:41:19] 
[2026-04-27 23:41:19] 2026-04-27 21:40:22,377 | INFO     | ***************************************
[2026-04-27 23:41:19] 2026-04-27 21:40:22,881 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-27 23:41:19] 2026-04-27 21:40:23,077 | INFO     | sufficient remaining disk space (489768878080 B)
[2026-04-27 23:41:19] 2026-04-27 21:40:23,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 23:41:19] 2026-04-27 21:40:23,078 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 23:41:19] 2026-04-27 21:40:23,078 | INFO     | update_server=False
[2026-04-27 23:41:19] 2026-04-27 21:40:23,078 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 23:41:19] 2026-04-27 21:40:23,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:41:19] 2026-04-27 21:40:23,079 | INFO     | aborting loop
[2026-04-27 23:41:19] 2026-04-27 21:40:23,539 | INFO     | all job control threads have been joined
[2026-04-27 23:41:19] 2026-04-27 21:40:23,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 23:41:19] 2026-04-27 21:40:24,085 | INFO     | [job] retrieve thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,087 | INFO     | [job] job monitor thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,130 | INFO     | all data control threads have been joined
[2026-04-27 23:41:19] 2026-04-27 21:40:24,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 23:41:19] 2026-04-27 21:40:24,505 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,546 | INFO     | [job] control thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,553 | INFO     | all payload control threads have been joined
[2026-04-27 23:41:19] 2026-04-27 21:40:24,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 23:41:19] 2026-04-27 21:40:24,631 | INFO     | [payload] validate_post thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,692 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,966 | INFO     | [payload] failed_post thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:24,999 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,037 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,137 | INFO     | [data] control thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,221 | INFO     | [job] queue monitor thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,558 | INFO     | [job] validate thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,560 | INFO     | [payload] control thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,581 | INFO     | [data] copytool_in thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:25,617 | INFO     | [data] copytool_out thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:28,566 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 23:41:19] 2026-04-27 21:40:51,856 | INFO     | PID=26544 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 23:41:19] 2026-04-27 21:40:51,856 | INFO     | .. there are 2 such processes running
[2026-04-27 23:41:19] 2026-04-27 21:40:51,865 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 23:41:19] 2026-04-27 21:40:51,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 23:41:19] 2026-04-27 21:40:51,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 23:41:19] 2026-04-27 21:41:07,680 | INFO     | [monitor] cgroup control has ended
[2026-04-27 23:41:19] 2026-04-27 21:41:09,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643675494208)>', '<ExcThread(monitor, started 140643225544448)>']
[2026-04-27 23:41:19] 2026-04-27 21:41:09,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 23:41:19] 2026-04-27 21:41:09,973 | INFO     | [monitor] control thread has ended
[2026-04-27 23:41:19] 2026-04-27 21:41:14,176 | INFO     | all workflow threads have been joined
[2026-04-27 23:41:19] 2026-04-27 21:41:14,176 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 23:41:19] 2026-04-27 21:41:14,176 | INFO     | traces error code: 0
[2026-04-27 23:41:19] 2026-04-27 21:41:14,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 23:41:19] 2026-04-27 21:41:14,578 [wrapper] ==== pilot stdout END ====
[2026-04-27 23:41:19] 2026-04-27 21:41:14,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 23:41:19] 2026-04-27 21:41:14,812 [wrapper] pilotpid: 26544
[2026-04-27 23:41:19] 2026-04-27 21:41:14,929 [wrapper] Pilot exit status: 0
[2026-04-27 23:41:19] 2026-04-27 21:41:15,490 [wrapper] pandaids: 7116197135
[2026-04-27 23:41:19] 2026-04-27 21:41:16,344 [wrapper] cleanup supervisor_pilot  7500 26545
[2026-04-27 23:41:19] 2026-04-27 21:41:16,440 [wrapper] Test setup, not cleaning
[2026-04-27 23:41:19] 2026-04-27 21:41:16,531 [wrapper] apfmon messages muted
[2026-04-27 23:41:19] 2026-04-27 21:41:16,645 [wrapper] ==== wrapper stdout END ====
[2026-04-27 23:41:19] 2026-04-27 21:41:16,766 [wrapper] ==== wrapper stderr END ====
[2026-04-27 23:41:19]  *** Error codes and diagnostics ***
[2026-04-27 23:41:19]     "exeErrorCode": 0,
[2026-04-27 23:41:19]     "pilotErrorCode": 0,
[2026-04-27 23:41:19]  *** Listing of results directory ***
[2026-04-27 23:41:19] total 2486568
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc     683926 Apr 27 00:33 pilot3.tar.gz
[2026-04-27 23:41:19] -rwx------. 1 boinc boinc      36322 Apr 27 00:36 runpilot2-wrapper.sh
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc       5631 Apr 27 00:39 queuedata.json
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc        100 Apr 27 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 23:41:19] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 16:09 run_atlas
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc        105 Apr 27 16:09 job.xml
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc       6305 Apr 27 16:10 init_data.xml
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc 2260411466 Apr 27 16:10 EVNT.49820242._000015.pool.root.1
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc      15667 Apr 27 16:10 start_atlas.sh
[2026-04-27 23:41:19] drwxrwx--x. 2 boinc boinc         68 Apr 27 16:10 shared
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc     697409 Apr 27 16:10 input.tar.gz
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc          0 Apr 27 16:10 boinc_lockfile
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc       2548 Apr 27 16:10 pandaJob.out
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc        415 Apr 27 16:18 workernode_map.json
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc     996921 Apr 27 16:18 agis_schedconf.cvmfs.json
[2026-04-27 23:41:19] drwx------. 5 boinc boinc       4096 Apr 27 16:18 pilot3
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc  275807774 Apr 27 23:38 HITS.49820244._017550.pool.root.1
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc        491 Apr 27 23:38 boinc_task_state.xml
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc       1013 Apr 27 23:40 memory_monitor_summary.json
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc    1512704 Apr 27 23:40 agis_ddmendpoints.agis.ALL.json
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc     530753 Apr 27 23:40 log.49820244._017550.job.log.tgz.1
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc       6341 Apr 27 23:40 heartbeat_new.json
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc       6232 Apr 27 23:40 heartbeat.json
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc         95 Apr 27 23:40 pilot_heartbeat.json
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc       8192 Apr 27 23:41 boinc_mmap_file
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc         29 Apr 27 23:41 wrapper_checkpoint.txt
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc       4883 Apr 27 23:41 pilotlog.txt
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc    2424126 Apr 27 23:41 log.49820244._017550.job.log.1
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc        357 Apr 27 23:41 output.list
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc        410 Apr 27 23:41 runtime_log
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc    2969600 Apr 27 23:41 result.tar.gz
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc       8439 Apr 27 23:41 runtime_log.err
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc        657 Apr 27 23:41 938677668a83.diag
[2026-04-27 23:41:19] -rw-r--r--. 1 boinc boinc      20648 Apr 27 23:41 stderr.txt
[2026-04-27 23:41:19] HITS file was successfully produced:
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc 275807774 Apr 27 23:38 shared/HITS.pool.root.1
[2026-04-27 23:41:19]  *** Contents of shared directory: ***
[2026-04-27 23:41:19] total 2480380
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc 2260411466 Apr 27 16:10 ATLAS.root_0
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc      15667 Apr 27 16:10 start_atlas.sh
[2026-04-27 23:41:19] -rw-r--r--. 2 boinc boinc     697409 Apr 27 16:10 input.tar.gz
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc  275807774 Apr 27 23:38 HITS.pool.root.1
[2026-04-27 23:41:19] -rw-------. 1 boinc boinc    2969600 Apr 27 23:41 result.tar.gz
23:41:20 (22557): run_atlas exited; CPU time 101335.760992
23:41:20 (22557): called boinc_finish(0)

</stderr_txt>
]]>

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