Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:44:53 (4134277): wrapper (7.7.26015): starting
23:44:53 (4134277): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 23:44:53] Arguments: --nthreads 12
[2026-04-27 23:44:53] Threads: 12
[2026-04-27 23:44:53] Checking for CVMFS
[2026-04-27 23:44:53] No cvmfs_config command found, will try listing directly
[2026-04-27 23:44:53] CVMFS is ok
[2026-04-27 23:44:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 23:44:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 23:44:53] Further information can be found at the LHC@home message board.
[2026-04-27 23:44:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 23:44:53] Checking for apptainer binary...
[2026-04-27 23:44:53] which: no apptainer in ((null))
[2026-04-27 23:44:53] apptainer is not installed, using version from CVMFS
[2026-04-27 23:44:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 23:44:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-04-27 23:44:53] apptainer works
[2026-04-27 23:44:53] Set ATHENA_PROC_NUMBER=12
[2026-04-27 23:44:53] Set ATHENA_CORE_NUMBER=12
[2026-04-27 23:44:53] Starting ATLAS job with PandaID=7104803999
[2026-04-27 23:44:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 00:33:29]  *** The last 200 lines of the pilot log: ***
[2026-04-28 00:33:29]  guid=0f258704-d835-4585-ae16-4b985f4f1bc7
[2026-04-28 00:33:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-28 00:33:29]  is_altstaged=None
[2026-04-28 00:33:29]  is_tar=False
[2026-04-28 00:33:29]  lfn=log.49820244._012159.job.log.tgz.1
[2026-04-28 00:33:29]  mtime=0
[2026-04-28 00:33:29]  protocol_id=None
[2026-04-28 00:33:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-28 00:33:29]  replicas=None
[2026-04-28 00:33:29]  scope=mc23_13p6TeV
[2026-04-28 00:33:29]  status=None
[2026-04-28 00:33:29]  status_code=0
[2026-04-28 00:33:29]  storage_token=
[2026-04-28 00:33:29]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7104803999/log.49820244._012159.job.log.tgz.1
[2026-04-28 00:33:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/cb/log.49820244._012159.job.log.tgz.1
[2026-04-28 00:33:29]  workdir=None
[2026-04-28 00:33:29] ]
[2026-04-28 00:33:29] 2026-04-27 22:32:56,008 | INFO     | transferring file log.49820244._012159.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7104803999/log.49820244._012159.job.log.tgz.1 to /var/lib/
[2026-04-28 00:33:29] 2026-04-27 22:32:56,008 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7104803999/log.49820244._012159.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-04-28 00:33:29] 2026-04-27 22:32:56,028 | INFO     | adding to output.list: log.49820244._012159.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/cb/log.49820244._012159.job.log.tg
[2026-04-28 00:33:29] 2026-04-27 22:32:56,029 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-28 00:33:29] 2026-04-27 22:32:56,029 | INFO     | summary of transferred files:
[2026-04-28 00:33:29] 2026-04-27 22:32:56,029 | INFO     |  -- lfn=log.49820244._012159.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 00:33:29] 2026-04-27 22:32:56,029 | INFO     | stage-out finished correctly
[2026-04-28 00:33:29] 2026-04-27 22:32:56,229 | INFO     | PID=4143213 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,230 | INFO     | .. there are 16 such processes running
[2026-04-28 00:33:29] 2026-04-27 22:32:56,743 | INFO     | monitor loop #217: job 0:7104803999 is in state 'finished'
[2026-04-28 00:33:29] 2026-04-27 22:32:56,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,873 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 00:33:29] 2026-04-27 22:32:56,926 | INFO     | job 7104803999 has state=finished
[2026-04-28 00:33:29] 2026-04-27 22:32:56,926 | INFO     | preparing for final server update for job 7104803999 in state='finished'
[2026-04-28 00:33:29] 2026-04-27 22:32:56,927 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7104803999/jobReport.json
[2026-04-28 00:33:29] 2026-04-27 22:32:56,928 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-04-28 00:33:29] 2026-04-27 22:32:56,928 | INFO     | this job has now completed (state=finished)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,929 | INFO     | log transfer has been attempted: DONE
[2026-04-28 00:33:29] 2026-04-27 22:32:56,929 | INFO     | job 7104803999 has finished - writing final server update
[2026-04-28 00:33:29] 2026-04-27 22:32:56,929 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3749328/.job.ad'
[2026-04-28 00:33:29] 2026-04-27 22:32:56,929 | INFO     | total number of processed events: 400 (read)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,946 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7104803999/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,947 | INFO     | extracted standard info from prmon json
[2026-04-28 00:33:29] 2026-04-27 22:32:56,947 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 00:33:29] 2026-04-27 22:32:56,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 00:33:29] 2026-04-27 22:32:56,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | fitting pss+swap vs Time
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | sum of square deviations: 19832930.0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | sum of deviations: -45008209.5
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | mean x (centered): 0.0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | mean y: 2762306.525
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | intersect: 2762306.525
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | chi2: 0.0005259069238413699
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | current memory leak: -2.27 B/s (using 40 data points, chi2=0.00)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | could have reported an average CPU frequency of 3637 MHz (5 samples)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | ..............................
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | . Timing measurements:
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | . get job = 0 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | . initial setup = 4 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | . payload setup = 6 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,948 | INFO     | . stage-in = 0 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,949 | INFO     | . payload execution = 2847 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,949 | INFO     | . stage-out = 0 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,949 | INFO     | . log creation = 0 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,949 | INFO     | ..............................
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | job summary report
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | --------------------------------------------------
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | PanDA job id: 7104803999
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | task id: 49820244
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | errors: (none)
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | pilot state: finished 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | transexitcode: 0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | exeerrorcode: 0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | exeerrordiag: 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | exitcode: 0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | exitmsg: OK
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | cpuconsumptiontime: 31150 s
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | nevents: 400
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | neventsw: 0
[2026-04-28 00:33:29] 2026-04-27 22:32:56,996 | INFO     | pid: 4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | pgrp: 4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | corecount: 12
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | event service: False
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | sizes: {0: 2280807, 1: 2282437, 11: 2282465, 2858: 2307841, 2860: 2316863, 2861: 2317273}
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | --------------------------------------------------
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | 
[2026-04-28 00:33:29] 2026-04-27 22:32:56,997 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | job 7104803999 has completed (purged errors)
[2026-04-28 00:33:29] 2026-04-27 22:32:57,019 | INFO     | overall cleanup function is called
[2026-04-28 00:33:29] 2026-04-27 22:32:58,027 | INFO     | --- collectZombieJob: --- 10, [4154872]
[2026-04-28 00:33:29] 2026-04-27 22:32:58,027 | INFO     | zombie collector waiting for pid 4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:58,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 00:33:29] 2026-04-27 22:32:58,027 | INFO     | collected zombie processes
[2026-04-28 00:33:29] 2026-04-27 22:32:58,027 | INFO     | will attempt to kill all subprocesses of pid=4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:58,334 | INFO     | process IDs to be killed: [4154872] (in reverse order)
[2026-04-28 00:33:29] 2026-04-27 22:32:58,483 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 00:33:29] 2026-04-27 22:32:58,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 00:33:29] 2026-04-27 22:32:58,509 | INFO     | did not find any defunct processes belonging to 4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:58,531 | INFO     | did not find any defunct processes belonging to 4154872
[2026-04-28 00:33:29] 2026-04-27 22:32:58,532 | INFO     | Ready for new job
[2026-04-28 00:33:29] 2026-04-27 22:32:58,533 | INFO     | ***************************************
[2026-04-28 00:33:29] 2026-04-27 22:32:58,533 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 00:33:29] 2026-04-27 22:32:58,533 | INFO     | ***************************************
[2026-04-28 00:33:29] 2026-04-27 22:32:58,533 | INFO     | 
[2026-04-28 00:33:29] 2026-04-27 22:32:58,538 | INFO     | architecture information:
[2026-04-28 00:33:29] 2026-04-27 22:32:58,538 | INFO     | executing command: cat /etc/os-release
[2026-04-28 00:33:29] 2026-04-27 22:32:58,552 | INFO     | cat /etc/os-release:
[2026-04-28 00:33:29] NAME="CentOS Linux"
[2026-04-28 00:33:29] VERSION="7 (Core)"
[2026-04-28 00:33:29] ID="centos"
[2026-04-28 00:33:29] ID_LIKE="rhel fedora"
[2026-04-28 00:33:29] VERSION_ID="7"
[2026-04-28 00:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 00:33:29] ANSI_COLOR="0;31"
[2026-04-28 00:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 00:33:29] HOME_URL="https://www.centos.org/"
[2026-04-28 00:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 00:33:29] 
[2026-04-28 00:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 00:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 00:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 00:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 00:33:29] 
[2026-04-28 00:33:29] 2026-04-27 22:32:58,552 | INFO     | ***************************************
[2026-04-28 00:33:29] 2026-04-27 22:32:59,055 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-04-28 00:33:29] 2026-04-27 22:32:59,071 | INFO     | sufficient remaining disk space (18836619264 B)
[2026-04-28 00:33:29] 2026-04-27 22:32:59,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 00:33:29] 2026-04-27 22:32:59,072 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 00:33:29] 2026-04-27 22:32:59,072 | INFO     | update_server=False
[2026-04-28 00:33:29] 2026-04-27 22:32:59,072 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 00:33:29] 2026-04-27 22:32:59,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 00:33:29] 2026-04-27 22:32:59,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 00:33:29] 2026-04-27 22:32:59,116 | INFO     | all job control threads have been joined
[2026-04-28 00:33:29] 2026-04-27 22:32:59,246 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-28 00:33:29] 2026-04-27 22:32:59,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-28 00:33:29] 2026-04-27 22:32:59,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 00:33:29] 2026-04-27 22:32:59,247 | INFO     | will abort loop
[2026-04-28 00:33:29] 2026-04-27 22:32:59,288 | INFO     | all data control threads have been joined
[2026-04-28 00:33:29] 2026-04-27 22:32:59,404 | INFO     | all payload control threads have been joined
[2026-04-28 00:33:29] 2026-04-27 22:33:00,077 | INFO     | [job] retrieve thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,082 | INFO     | [payload] failed_post thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,120 | INFO     | [job] control thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,251 | INFO     | [job] job monitor thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,293 | INFO     | [data] control thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,409 | INFO     | [payload] control thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,424 | INFO     | [payload] validate_post thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,463 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,517 | INFO     | [job] validate thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,624 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:00,716 | INFO     | [data] copytool_in thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:01,094 | INFO     | [data] copytool_out thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:01,473 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:02,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 00:33:29] 2026-04-27 22:33:03,011 | INFO     | [job] queue monitor thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:03,078 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:09,504 | INFO     | [monitor] cgroup control has ended
[2026-04-28 00:33:29] 2026-04-27 22:33:10,064 | INFO     | job.realtimelogging is not enabled
[2026-04-28 00:33:29] 2026-04-27 22:33:11,070 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 00:33:29] 2026-04-27 22:33:11,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22960901764928)>', '<ExcThread(monitor, started 22960667903744)>']
[2026-04-28 00:33:29] 2026-04-27 22:33:16,105 | INFO     | all workflow threads have been joined
[2026-04-28 00:33:29] 2026-04-27 22:33:16,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 00:33:29] 2026-04-27 22:33:16,105 | INFO     | traces error code: 0
[2026-04-28 00:33:29] 2026-04-27 22:33:16,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 00:33:29] 2026-04-27 22:33:28,783 | INFO     | PID=4143213 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 00:33:29] 2026-04-27 22:33:28,783 | INFO     | .. there are 16 such processes running
[2026-04-28 00:33:29] 2026-04-27 22:33:28,784 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 00:33:29] 2026-04-27 22:33:28,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 00:33:29] 2026-04-27 22:33:28,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 00:33:29] 2026-04-27 22:33:28,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 00:33:29] 2026-04-27 22:33:28,785 | INFO     | [monitor] control thread has ended
[2026-04-28 00:33:29] 2026-04-27 22:33:28,908 [wrapper] ==== pilot stdout END ====
[2026-04-28 00:33:29] 2026-04-27 22:33:28,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 00:33:29] 2026-04-27 22:33:28,912 [wrapper] pilotpid: 4143213
[2026-04-28 00:33:29] 2026-04-27 22:33:28,914 [wrapper] Pilot exit status: 0
[2026-04-28 00:33:29] 2026-04-27 22:33:28,923 [wrapper] pandaids: 7104803999
[2026-04-28 00:33:29] 2026-04-27 22:33:29,026 [wrapper] cleanup supervisor_pilot  267194 4143215
[2026-04-28 00:33:29] 2026-04-27 22:33:29,028 [wrapper] Test setup, not cleaning
[2026-04-28 00:33:29] 2026-04-27 22:33:29,030 [wrapper] apfmon messages muted
[2026-04-28 00:33:29] 2026-04-27 22:33:29,032 [wrapper] ==== wrapper stdout END ====
[2026-04-28 00:33:29] 2026-04-27 22:33:29,034 [wrapper] ==== wrapper stderr END ====
[2026-04-28 00:33:29]  *** Error codes and diagnostics ***
[2026-04-28 00:33:29]     "exeErrorCode": 0,
[2026-04-28 00:33:29]     "pilotErrorCode": 0,
[2026-04-28 00:33:29]  *** Listing of results directory ***
[2026-04-28 00:33:29] total 2471884
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc     683926 Apr 26 19:56 pilot3.tar.gz
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc       5631 Apr 26 20:02 queuedata.json
[2026-04-28 00:33:29] -rwx------. 1 boinc boinc      36322 Apr 26 20:02 runpilot2-wrapper.sh
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc        100 Apr 27 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 00:33:29] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 23:44 run_atlas
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc        105 Apr 27 23:44 job.xml
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc 2259978159 Apr 27 23:44 EVNT.49820242._000020.pool.root.1
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc      15667 Apr 27 23:44 start_atlas.sh
[2026-04-28 00:33:29] drwxrwx--x. 2 boinc boinc       4096 Apr 27 23:44 shared
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc     697410 Apr 27 23:44 input.tar.gz
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc       6630 Apr 27 23:44 init_data.xml
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc          0 Apr 27 23:44 boinc_lockfile
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc       2549 Apr 27 23:44 pandaJob.out
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc     997805 Apr 27 23:45 agis_schedconf.cvmfs.json
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc    1512704 Apr 27 23:45 agis_ddmendpoints.agis.ALL.json
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc        445 Apr 27 23:45 workernode_map.json
[2026-04-28 00:33:29] drwx------. 5 boinc boinc       4096 Apr 27 23:45 pilot3
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc  265797939 Apr 28 00:32 HITS.49820244._012159.pool.root.1
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc        488 Apr 28 00:32 boinc_task_state.xml
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc       1029 Apr 28 00:32 memory_monitor_summary.json
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc     334857 Apr 28 00:32 log.49820244._012159.job.log.tgz.1
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc       6373 Apr 28 00:32 heartbeat_new.json
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc       6264 Apr 28 00:32 heartbeat.json
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc       8192 Apr 28 00:33 boinc_mmap_file
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc         27 Apr 28 00:33 wrapper_checkpoint.txt
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc        823 Apr 28 00:33 pilotlog.txt
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc         95 Apr 28 00:33 pilot_heartbeat.json
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc     312564 Apr 28 00:33 log.49820244._012159.job.log.1
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc        357 Apr 28 00:33 output.list
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc        410 Apr 28 00:33 runtime_log
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc     665600 Apr 28 00:33 result.tar.gz
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc       8846 Apr 28 00:33 runtime_log.err
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc        663 Apr 28 00:33 534dca3a259a.diag
[2026-04-28 00:33:29] -rw-r--r--. 1 boinc boinc      21223 Apr 28 00:33 stderr.txt
[2026-04-28 00:33:29] HITS file was successfully produced:
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc 265797939 Apr 28 00:32 shared/HITS.pool.root.1
[2026-04-28 00:33:29]  *** Contents of shared directory: ***
[2026-04-28 00:33:29] total 2467944
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc 2259978159 Apr 27 23:44 ATLAS.root_0
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc      15667 Apr 27 23:44 start_atlas.sh
[2026-04-28 00:33:29] -rw-r--r--. 2 boinc boinc     697410 Apr 27 23:44 input.tar.gz
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc  265797939 Apr 28 00:32 HITS.pool.root.1
[2026-04-28 00:33:29] -rw-------. 1 boinc boinc     665600 Apr 28 00:33 result.tar.gz
00:33:30 (4134277): run_atlas exited; CPU time 31240.765479
00:33:30 (4134277): called boinc_finish(0)

</stderr_txt>
]]>

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