Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:28:10 (656412): wrapper (7.7.26015): starting
06:28:10 (656412): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 06:28:10] Arguments: --nthreads 4
[2026-04-27 06:28:10] Threads: 4
[2026-04-27 06:28:10] Checking for CVMFS
[2026-04-27 06:28:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 06:28:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 06:28:11] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 06:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 06:28:11] 2.9.2.0 520919 758 73336 158915 3 49 34841080 36864000 0 130560 0 494621 99.989 28899 16919 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-04-27 06:28:11] CVMFS is ok
[2026-04-27 06:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 06:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 06:28:11] Further information can be found at the LHC@home message board.
[2026-04-27 06:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 06:28:11] Checking for apptainer binary...
[2026-04-27 06:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 06:28:11] Running /usr/bin/apptainer --version
[2026-04-27 06:28:11] apptainer version 1.4.1-1.1
[2026-04-27 06:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 06:28:11] thA309
[2026-04-27 06:28:11] apptainer works
[2026-04-27 06:28:11] Set ATHENA_PROC_NUMBER=4
[2026-04-27 06:28:11] Set ATHENA_CORE_NUMBER=4
[2026-04-27 06:28:11] Starting ATLAS job with PandaID=7116174987
[2026-04-27 06:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 07:57:47]  *** The last 200 lines of the pilot log: ***
[2026-04-27 07:57:47] 2026-04-27 05:57:16,068 | INFO     | did not find any defunct processes belonging to 665050
[2026-04-27 07:57:47] 2026-04-27 05:57:16,068 | INFO     | Ready for new job
[2026-04-27 07:57:47] 2026-04-27 05:57:16,069 | INFO     | ***************************************
[2026-04-27 07:57:47] 2026-04-27 05:57:16,069 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 07:57:47] 2026-04-27 05:57:16,069 | INFO     | ***************************************
[2026-04-27 07:57:47] 2026-04-27 05:57:16,069 | INFO     | 
[2026-04-27 07:57:47] 2026-04-27 05:57:16,070 | INFO     | architecture information:
[2026-04-27 07:57:47] 2026-04-27 05:57:16,070 | INFO     | executing command: cat /etc/os-release
[2026-04-27 07:57:47] 2026-04-27 05:57:16,085 | INFO     | cat /etc/os-release:
[2026-04-27 07:57:47] NAME="CentOS Linux"
[2026-04-27 07:57:47] VERSION="7 (Core)"
[2026-04-27 07:57:47] ID="centos"
[2026-04-27 07:57:47] ID_LIKE="rhel fedora"
[2026-04-27 07:57:47] VERSION_ID="7"
[2026-04-27 07:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 07:57:47] ANSI_COLOR="0;31"
[2026-04-27 07:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 07:57:47] HOME_URL="https://www.centos.org/"
[2026-04-27 07:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 07:57:47] 
[2026-04-27 07:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 07:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 07:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 07:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 07:57:47] 
[2026-04-27 07:57:47] 2026-04-27 05:57:16,085 | INFO     | ***************************************
[2026-04-27 07:57:47] 2026-04-27 05:57:16,589 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-04-27 07:57:47] 2026-04-27 05:57:16,607 | INFO     | sufficient remaining disk space (210954616832 B)
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | INFO     | update_server=False
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 07:57:47] 2026-04-27 05:57:16,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:57:47] 2026-04-27 05:57:16,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 07:57:47] 2026-04-27 05:57:17,082 | INFO     | all data control threads have been joined
[2026-04-27 07:57:47] 2026-04-27 05:57:17,362 | INFO     | all payload control threads have been joined
[2026-04-27 07:57:47] 2026-04-27 05:57:17,613 | INFO     | [job] retrieve thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:17,614 | INFO     | [job] queue monitor thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:17,652 | INFO     | [payload] validate_post thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:17,731 | WARNING  | process 665050 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 07:57:47] 2026-04-27 05:57:17,768 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 07:57:47] 2026-04-27 05:57:17,804 | INFO     | number of running child processes to parent process 665050: 1
[2026-04-27 07:57:47] 2026-04-27 05:57:17,804 | INFO     | maximum number of monitored processes: 6
[2026-04-27 07:57:47] 2026-04-27 05:57:17,804 | INFO     | aborting job monitoring since job object (job id=7116174987) has expired
[2026-04-27 07:57:47] 2026-04-27 05:57:17,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:57:47] 2026-04-27 05:57:17,805 | INFO     | will abort loop
[2026-04-27 07:57:47] 2026-04-27 05:57:17,991 | INFO     | all job control threads have been joined
[2026-04-27 07:57:47] 2026-04-27 05:57:18,088 | INFO     | [data] control thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,368 | INFO     | [payload] control thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,403 | INFO     | [job] validate thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,437 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,508 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,668 | INFO     | [payload] failed_post thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,685 | INFO     | [data] copytool_in thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,810 | INFO     | [job] job monitor thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,877 | INFO     | [data] copytool_out thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,918 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:18,997 | INFO     | [job] control thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:20,615 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:27,402 | INFO     | job.realtimelogging is not enabled
[2026-04-27 07:57:47] 2026-04-27 05:57:28,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 07:57:47] 2026-04-27 05:57:32,231 | INFO     | [monitor] cgroup control has ended
[2026-04-27 07:57:47] 2026-04-27 05:57:33,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140347332941632)>', '<ExcThread(monitor, started 140346730190592)>']
[2026-04-27 07:57:47] 2026-04-27 05:57:38,069 | INFO     | all workflow threads have been joined
[2026-04-27 07:57:47] 2026-04-27 05:57:38,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 07:57:47] 2026-04-27 05:57:38,069 | INFO     | traces error code: 0
[2026-04-27 07:57:47] 2026-04-27 05:57:38,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | INFO     | PID=660527 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 07:57:47] 2026-04-27 05:57:47,512 | INFO     | [monitor] control thread has ended
[2026-04-27 07:57:47] 2026-04-27 05:57:47,591 [wrapper] ==== pilot stdout END ====
[2026-04-27 07:57:47] 2026-04-27 05:57:47,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 07:57:47] 2026-04-27 05:57:47,599 [wrapper] pilotpid: 660527
[2026-04-27 07:57:47] 2026-04-27 05:57:47,603 [wrapper] Pilot exit status: 0
[2026-04-27 07:57:47] 2026-04-27 05:57:47,616 [wrapper] pandaids: 7116174987
[2026-04-27 07:57:47] 2026-04-27 05:57:47,639 [wrapper] cleanup supervisor_pilot  670890 660528
[2026-04-27 07:57:47] 2026-04-27 05:57:47,643 [wrapper] Test setup, not cleaning
[2026-04-27 07:57:47] 2026-04-27 05:57:47,648 [wrapper] apfmon messages muted
[2026-04-27 07:57:47] 2026-04-27 05:57:47,652 [wrapper] ==== wrapper stdout END ====
[2026-04-27 07:57:47] 2026-04-27 05:57:47,656 [wrapper] ==== wrapper stderr END ====
[2026-04-27 07:57:47]  *** Error codes and diagnostics ***
[2026-04-27 07:57:47]     "exeErrorCode": 0,
[2026-04-27 07:57:47]     "pilotErrorCode": 0,
[2026-04-27 07:57:47]  *** Listing of results directory ***
[2026-04-27 07:57:47] total 1356844
[2026-04-27 07:57:47] -rwx------ 1 boinc boinc      36322 Apr 26 21:32 runpilot2-wrapper.sh
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc       5631 Apr 26 21:34 queuedata.json
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc     683926 Apr 26 21:34 pilot3.tar.gz
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc        100 Apr 27 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 07:57:47] -rwxr-xr-x 1 boinc boinc       7986 Apr 27 06:28 run_atlas
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc        105 Apr 27 06:28 job.xml
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc 1167790013 Apr 27 06:28 EVNT.49912842._000002.pool.root.1
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc     697424 Apr 27 06:28 input.tar.gz
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc      15667 Apr 27 06:28 start_atlas.sh
[2026-04-27 07:57:47] drwxrwx--x 2 boinc boinc       4096 Apr 27 06:28 shared
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc          0 Apr 27 06:28 boinc_setup_complete
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc       6292 Apr 27 06:28 init_data.xml
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc          0 Apr 27 06:28 boinc_lockfile
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc       2614 Apr 27 06:28 pandaJob.out
[2026-04-27 07:57:47] -rw------- 1 boinc boinc     997530 Apr 27 06:28 agis_schedconf.cvmfs.json
[2026-04-27 07:57:47] -rw------- 1 boinc boinc    1509089 Apr 27 06:28 agis_ddmendpoints.agis.ALL.json
[2026-04-27 07:57:47] -rw------- 1 boinc boinc        420 Apr 27 06:28 workernode_map.json
[2026-04-27 07:57:47] drwx------ 5 boinc boinc       4096 Apr 27 06:28 pilot3
[2026-04-27 07:57:47] -rw------- 1 boinc boinc         95 Apr 27 07:56 pilot_heartbeat.json
[2026-04-27 07:57:47] -rw------- 1 boinc boinc  215908817 Apr 27 07:56 HITS.49912847._000137.pool.root.1
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc        488 Apr 27 07:56 boinc_task_state.xml
[2026-04-27 07:57:47] -rw------- 1 boinc boinc       1026 Apr 27 07:57 memory_monitor_summary.json
[2026-04-27 07:57:47] -rw------- 1 boinc boinc     278670 Apr 27 07:57 log.49912847._000137.job.log.tgz.1
[2026-04-27 07:57:47] -rw------- 1 boinc boinc       6328 Apr 27 07:57 heartbeat_new.json
[2026-04-27 07:57:47] -rw------- 1 boinc boinc       6219 Apr 27 07:57 heartbeat.json
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc       8192 Apr 27 07:57 boinc_mmap_file
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc         27 Apr 27 07:57 wrapper_checkpoint.txt
[2026-04-27 07:57:47] -rw------- 1 boinc boinc        746 Apr 27 07:57 pilotlog.txt
[2026-04-27 07:57:47] -rw------- 1 boinc boinc     516420 Apr 27 07:57 log.49912847._000137.job.log.1
[2026-04-27 07:57:47] -rw------- 1 boinc boinc        357 Apr 27 07:57 output.list
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc        410 Apr 27 07:57 runtime_log
[2026-04-27 07:57:47] -rw------- 1 boinc boinc     808960 Apr 27 07:57 result.tar.gz
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc       8519 Apr 27 07:57 runtime_log.err
[2026-04-27 07:57:47] -rw------- 1 boinc boinc        657 Apr 27 07:57 684d79b6263d.diag
[2026-04-27 07:57:47] -rw-r--r-- 1 boinc boinc      10142 Apr 27 07:57 stderr.txt
[2026-04-27 07:57:47] HITS file was successfully produced:
[2026-04-27 07:57:47] -rw------- 1 boinc boinc 215908817 Apr 27 07:56 shared/HITS.pool.root.1
[2026-04-27 07:57:47]  *** Contents of shared directory: ***
[2026-04-27 07:57:47] total 1352772
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc 1167790013 Apr 27 06:28 ATLAS.root_0
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc     697424 Apr 27 06:28 input.tar.gz
[2026-04-27 07:57:47] -rw-r--r-- 2 boinc boinc      15667 Apr 27 06:28 start_atlas.sh
[2026-04-27 07:57:47] -rw------- 1 boinc boinc  215908817 Apr 27 07:56 HITS.pool.root.1
[2026-04-27 07:57:47] -rw------- 1 boinc boinc     808960 Apr 27 07:57 result.tar.gz
07:57:49 (656412): run_atlas exited; CPU time 19219.817309
07:57:49 (656412): called boinc_finish(0)

</stderr_txt>
]]>

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