Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:59 (1237016): wrapper (7.7.26015): starting
09:11:59 (1237016): wrapper: running run_atlas (--nthreads 4)
[2026-04-29 09:11:59] Arguments: --nthreads 4
[2026-04-29 09:11:59] Threads: 4
[2026-04-29 09:11:59] Checking for CVMFS
[2026-04-29 09:11:59] No cvmfs_config command found, will try listing directly
[2026-04-29 09:11:59] CVMFS is ok
[2026-04-29 09:11:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 09:11:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 09:11:59] Further information can be found at the LHC@home message board.
[2026-04-29 09:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 09:11:59] Checking for apptainer binary...
[2026-04-29 09:11:59] which: no apptainer in ((null))
[2026-04-29 09:11:59] apptainer is not installed, using version from CVMFS
[2026-04-29 09:11:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 09:11:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-04-29 09:11:59] apptainer works
[2026-04-29 09:11:59] Set ATHENA_PROC_NUMBER=4
[2026-04-29 09:11:59] Set ATHENA_CORE_NUMBER=4
[2026-04-29 09:12:00] Starting ATLAS job with PandaID=7116175951
[2026-04-29 09:12:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 12:35:41]  *** The last 200 lines of the pilot log: ***
[2026-04-29 12:35:41] 2026-04-29 10:30:32,236 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,236 | INFO     | mean y: 2324986.7230769233
[2026-04-29 12:35:41] 2026-04-29 10:30:32,236 | INFO     | intersect: 2324986.7230769233
[2026-04-29 12:35:41] 2026-04-29 10:30:32,237 | INFO     | chi2: 2.082201003777634
[2026-04-29 12:35:41] 2026-04-29 10:30:32,237 | INFO     | sum of square deviations: 2126802667.5
[2026-04-29 12:35:41] 2026-04-29 10:30:32,238 | INFO     | sum of deviations: 29052225176.5
[2026-04-29 12:35:41] 2026-04-29 10:30:32,238 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,239 | INFO     | mean y: 2334336.710526316
[2026-04-29 12:35:41] 2026-04-29 10:30:32,239 | INFO     | intersect: 2334336.710526316
[2026-04-29 12:35:41] 2026-04-29 10:30:32,239 | INFO     | chi2: 1.3908880461829862
[2026-04-29 12:35:41] 2026-04-29 10:30:32,239 | INFO     | current chi2=1.3908880461829862 (change=33.201067348466026 %)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,239 | INFO     | sum of square deviations: 1963274020.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | sum of deviations: 28177696267.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | mean y: 2333521.0324324323
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | intersect: 2333521.0324324323
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | chi2: 1.3915387903204983
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | current chi2=1.3915387903204983 (change=-0.04678623411121626 %)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,241 | INFO     | right removable region: 184
[2026-04-29 12:35:41] 2026-04-29 10:30:32,242 | INFO     | sum of square deviations: 2126802667.5
[2026-04-29 12:35:41] 2026-04-29 10:30:32,243 | INFO     | sum of deviations: -8690512711.5
[2026-04-29 12:35:41] 2026-04-29 10:30:32,243 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,243 | INFO     | mean y: 2348534.7421052633
[2026-04-29 12:35:41] 2026-04-29 10:30:32,243 | INFO     | intersect: 2348534.7421052633
[2026-04-29 12:35:41] 2026-04-29 10:30:32,244 | INFO     | chi2: 0.7159164048723488
[2026-04-29 12:35:41] 2026-04-29 10:30:32,244 | INFO     | current chi2=0.7159164048723488 (change=65.61732495693273 %)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,244 | INFO     | sum of square deviations: 1963274020.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,245 | INFO     | sum of deviations: -10159260006.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,245 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,245 | INFO     | mean y: 2349879.291891892
[2026-04-29 12:35:41] 2026-04-29 10:30:32,245 | INFO     | intersect: 2349879.291891892
[2026-04-29 12:35:41] 2026-04-29 10:30:32,246 | INFO     | chi2: 0.7086204637857794
[2026-04-29 12:35:41] 2026-04-29 10:30:32,246 | INFO     | current chi2=0.7086204637857794 (change=1.0191051688318682 %)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,246 | INFO     | left removable region: 10
[2026-04-29 12:35:41] 2026-04-29 10:30:32,246 | INFO     | sum of square deviations: 1633472487.5
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | sum of deviations: 674311598.4999999
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | mean x (centered): 0.0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | mean y: 2360300.304597701
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | intersect: 2360300.304597701
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | chi2: 0.00046974590768697987
[2026-04-29 12:35:41] 2026-04-29 10:30:32,248 | INFO     | current memory leak: 0.41 B/s (using 174 data points, chi2=0.00)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | could have reported an average CPU frequency of 2702 MHz (10 samples)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | ..............................
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . Timing measurements:
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . get job = 0 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . initial setup = 9 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . payload setup = 17 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . stage-in = 0 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . payload execution = 11848 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . stage-out = 1 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,249 | INFO     | . log creation = 0 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,250 | INFO     | ..............................
[2026-04-29 12:35:41] 2026-04-29 10:30:32,344 | INFO     | 
[2026-04-29 12:35:41] 2026-04-29 10:30:32,344 | INFO     | job summary report
[2026-04-29 12:35:41] 2026-04-29 10:30:32,344 | INFO     | --------------------------------------------------
[2026-04-29 12:35:41] 2026-04-29 10:30:32,344 | INFO     | PanDA job id: 7116175951
[2026-04-29 12:35:41] 2026-04-29 10:30:32,344 | INFO     | task id: 49912847
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | errors: (none)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | pilot state: finished 
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | transexitcode: 0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | exeerrorcode: 0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | exeerrordiag: 
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | exitcode: 0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | exitmsg: OK
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | cpuconsumptiontime: 44527 s
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | nevents: 400
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | neventsw: 0
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | pid: 1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:32,345 | INFO     | pgrp: 1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | corecount: 4
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | event service: False
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | sizes: {0: 2280768, 1: 2282597, 12: 2282597, 11869: 2312761, 11870: 2312760, 11872: 2322020, 11874: 2322158}
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | --------------------------------------------------
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | 
[2026-04-29 12:35:41] 2026-04-29 10:30:32,346 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/1
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,376 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 12:35:41] 2026-04-29 10:30:32,376 | INFO     | job 7116175951 has completed (purged errors)
[2026-04-29 12:35:41] 2026-04-29 10:30:32,378 | INFO     | overall cleanup function is called
[2026-04-29 12:35:41] 2026-04-29 10:30:33,388 | INFO     | --- collectZombieJob: --- 10, [1255539]
[2026-04-29 12:35:41] 2026-04-29 10:30:33,388 | INFO     | zombie collector waiting for pid 1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:33,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 12:35:41] 2026-04-29 10:30:33,388 | INFO     | collected zombie processes
[2026-04-29 12:35:41] 2026-04-29 10:30:33,388 | INFO     | will attempt to kill all subprocesses of pid=1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:34,507 | WARNING  | process 1255539 can no longer be monitored (due to stat problems) - aborting
[2026-04-29 12:35:41] 2026-04-29 10:30:35,337 | INFO     | process IDs to be killed: [1255539] (in reverse order)
[2026-04-29 12:35:41] 2026-04-29 10:30:35,604 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 12:35:41] 2026-04-29 10:30:35,605 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 12:35:41] 2026-04-29 10:30:35,605 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-29 12:35:41] 2026-04-29 10:30:35,605 | WARNING  | maxPSS not found in memory monitor output
[2026-04-29 12:35:41] 2026-04-29 10:30:35,606 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7116175951/payload.stdout) since it has not been created yet
[2026-04-29 12:35:41] 2026-04-29 10:30:35,607 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-04-29 12:35:41] 2026-04-29 10:30:35,631 | INFO     | sufficient remaining disk space (30625759232 B)
[2026-04-29 12:35:41] 2026-04-29 10:30:35,631 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-29 12:35:41] 2026-04-29 10:30:35,632 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7116175951/HITS.49912847._000345.pool.root.1 since it does not exist
[2026-04-29 12:35:41] 2026-04-29 10:30:35,700 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 12:35:41] 2026-04-29 10:30:35,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 12:35:41] 2026-04-29 10:30:35,772 | INFO     | did not find any defunct processes belonging to 1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:35,851 | INFO     | did not find any defunct processes belonging to 1255539
[2026-04-29 12:35:41] 2026-04-29 10:30:35,852 | INFO     | Ready for new job
[2026-04-29 12:35:41] 2026-04-29 10:30:35,854 | INFO     | ***************************************
[2026-04-29 12:35:41] 2026-04-29 10:30:35,854 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 12:35:41] 2026-04-29 10:30:35,854 | INFO     | ***************************************
[2026-04-29 12:35:41] 2026-04-29 10:30:35,854 | INFO     | 
[2026-04-29 12:35:41] 2026-04-29 10:30:35,864 | INFO     | architecture information:
[2026-04-29 12:35:41] 2026-04-29 10:30:35,865 | INFO     | executing command: cat /etc/os-release
[2026-04-29 12:35:41] 2026-04-29 10:30:35,887 | INFO     | cat /etc/os-release:
[2026-04-29 12:35:41] NAME="CentOS Linux"
[2026-04-29 12:35:41] VERSION="7 (Core)"
[2026-04-29 12:35:41] ID="centos"
[2026-04-29 12:35:41] ID_LIKE="rhel fedora"
[2026-04-29 12:35:41] VERSION_ID="7"
[2026-04-29 12:35:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 12:35:41] ANSI_COLOR="0;31"
[2026-04-29 12:35:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 12:35:41] HOME_URL="https://www.centos.org/"
[2026-04-29 12:35:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 12:35:41] 
[2026-04-29 12:35:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 12:35:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 12:35:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 12:35:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 12:35:41] 
[2026-04-29 12:35:41] 2026-04-29 10:30:35,887 | INFO     | ***************************************
[2026-04-29 12:35:41] 2026-04-29 10:30:36,390 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-04-29 12:35:41] 2026-04-29 10:30:36,408 | INFO     | number of running child processes to parent process 1255539: 1
[2026-04-29 12:35:41] 2026-04-29 10:30:36,409 | INFO     | maximum number of monitored processes: 6
[2026-04-29 12:35:41] 2026-04-29 10:30:36,409 | INFO     | aborting job monitoring since job object (job id=7116175951) has expired
[2026-04-29 12:35:41] 2026-04-29 10:30:36,416 | INFO     | sufficient remaining disk space (30626807808 B)
[2026-04-29 12:35:41] 2026-04-29 10:30:36,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 12:35:41] 2026-04-29 10:30:36,416 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 12:35:41] 2026-04-29 10:30:36,416 | INFO     | update_server=False
[2026-04-29 12:35:41] 2026-04-29 10:30:36,416 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 12:35:41] 2026-04-29 10:30:36,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 12:35:41] 2026-04-29 10:30:36,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 12:35:41] 2026-04-29 10:30:36,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 12:35:41] 2026-04-29 10:30:36,418 | INFO     | will abort loop
[2026-04-29 12:35:41] 2026-04-29 10:30:36,460 | INFO     | all data control threads have been joined
[2026-04-29 12:35:41] 2026-04-29 10:30:37,258 | INFO     | all payload control threads have been joined
[2026-04-29 12:35:41] 2026-04-29 10:30:37,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 12:35:41] 2026-04-29 10:30:37,421 | INFO     | [job] retrieve thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:37,423 | INFO     | [job] job monitor thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:37,466 | INFO     | [data] control thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:37,762 | INFO     | all job control threads have been joined
[2026-04-29 12:35:41] 2026-04-29 10:30:37,800 | INFO     | [job] validate thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:37,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,203 | INFO     | [payload] failed_post thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,264 | INFO     | [payload] control thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,357 | INFO     | [job] queue monitor thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,423 | INFO     | [data] copytool_out thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,483 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,616 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,629 | INFO     | [payload] validate_post thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,764 | INFO     | [data] copytool_in thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,766 | INFO     | [job] control thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:38,820 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:40,423 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 12:35:41] 2026-04-29 10:30:45,589 | INFO     | [monitor] cgroup control has ended
[2026-04-29 12:35:41] 2026-04-29 10:30:45,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22478180808512)>', '<ExcThread(monitor, started 22477947553536)>']
[2026-04-29 12:35:41] 2026-04-29 10:30:50,861 | INFO     | all workflow threads have been joined
[2026-04-29 12:35:41] 2026-04-29 10:30:50,862 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 12:35:41] 2026-04-29 10:30:50,862 | INFO     | traces error code: 0
[2026-04-29 12:35:41] 2026-04-29 10:30:50,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | INFO     | PID=1244807 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | INFO     | .. there are 22 such processes running
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 12:35:41] 2026-04-29 10:31:05,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 12:35:41] 2026-04-29 10:31:05,796 | CRITICAL | thread 'MainThread' is not alive
[2026-04-29 12:35:41] 2026-04-29 10:31:05,796 | INFO     | [monitor] control thread has ended
[2026-04-29 12:35:41] 2026-04-29 10:31:05,936 [wrapper] ==== pilot stdout END ====
[2026-04-29 12:35:41] 2026-04-29 10:31:05,941 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 12:35:41] 2026-04-29 10:31:05,945 [wrapper] pilotpid: 1244807
[2026-04-29 12:35:41] 2026-04-29 10:31:05,949 [wrapper] Pilot exit status: 0
[2026-04-29 12:35:41] 2026-04-29 10:31:05,964 [wrapper] pandaids: 7116175951
[2026-04-29 12:35:41] 2026-04-29 10:31:06,174 [wrapper] cleanup supervisor_pilot 1700389 1244808
[2026-04-29 12:35:41] 2026-04-29 10:31:06,181 [wrapper] Test setup, not cleaning
[2026-04-29 12:35:41] 2026-04-29 10:31:06,185 [wrapper] apfmon messages muted
[2026-04-29 12:35:41] 2026-04-29 10:31:06,189 [wrapper] ==== wrapper stdout END ====
[2026-04-29 12:35:41] 2026-04-29 10:31:06,193 [wrapper] ==== wrapper stderr END ====
[2026-04-29 12:35:41]  *** Error codes and diagnostics ***
[2026-04-29 12:35:41]     "exeErrorCode": 0,
[2026-04-29 12:35:41]     "pilotErrorCode": 0,
[2026-04-29 12:35:41]  *** Listing of results directory ***
[2026-04-29 12:35:41] total 1356000
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc       5631 Apr 26 21:29 queuedata.json
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc     683926 Apr 26 21:29 pilot3.tar.gz
[2026-04-29 12:35:41] -rwx------. 1 boinc boinc      36322 Apr 26 21:29 runpilot2-wrapper.sh
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc        100 Apr 29 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 12:35:41] -rwxr-xr-x. 1 boinc boinc       7986 Apr 29 09:11 run_atlas
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc        105 Apr 29 09:11 job.xml
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc       6539 Apr 29 09:11 init_data.xml
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc 1162323119 Apr 29 09:11 EVNT.49912842._000004.pool.root.1
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc      15667 Apr 29 09:11 start_atlas.sh
[2026-04-29 12:35:41] drwxrwx--x. 2 boinc boinc       4096 Apr 29 09:11 shared
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc     697428 Apr 29 09:11 input.tar.gz
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc          0 Apr 29 09:11 boinc_lockfile
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc       2615 Apr 29 09:11 pandaJob.out
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc    1001452 Apr 29 09:12 agis_schedconf.cvmfs.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc        442 Apr 29 09:12 workernode_map.json
[2026-04-29 12:35:41] drwx------. 5 boinc boinc       4096 Apr 29 09:12 pilot3
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc  219170186 Apr 29 12:29 HITS.49912847._000345.pool.root.1
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc        488 Apr 29 12:30 boinc_task_state.xml
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc         95 Apr 29 12:30 pilot_heartbeat.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc       1029 Apr 29 12:30 memory_monitor_summary.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc    1512704 Apr 29 12:30 agis_ddmendpoints.agis.ALL.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc     352118 Apr 29 12:30 log.49912847._000345.job.log.tgz.1
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc       6369 Apr 29 12:30 heartbeat_new.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc       6260 Apr 29 12:30 heartbeat.json
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc        894 Apr 29 12:31 pilotlog.txt
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc    1105818 Apr 29 12:31 log.49912847._000345.job.log.1
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc        357 Apr 29 12:31 output.list
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc        410 Apr 29 12:31 runtime_log
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc    1474560 Apr 29 12:31 result.tar.gz
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc       8828 Apr 29 12:31 runtime_log.err
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc        666 Apr 29 12:31 67aa04398bf7.diag
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc         27 Apr 29 12:35 wrapper_checkpoint.txt
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc       8192 Apr 29 12:35 boinc_mmap_file
[2026-04-29 12:35:41] -rw-r--r--. 1 boinc boinc      21151 Apr 29 12:35 stderr.txt
[2026-04-29 12:35:41] HITS file was successfully produced:
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc 219170186 Apr 29 12:29 shared/HITS.pool.root.1
[2026-04-29 12:35:41]  *** Contents of shared directory: ***
[2026-04-29 12:35:41] total 1351268
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc 1162323119 Apr 29 09:11 ATLAS.root_0
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc      15667 Apr 29 09:11 start_atlas.sh
[2026-04-29 12:35:41] -rw-r--r--. 2 boinc boinc     697428 Apr 29 09:11 input.tar.gz
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc  219170186 Apr 29 12:29 HITS.pool.root.1
[2026-04-29 12:35:41] -rw-------. 1 boinc boinc    1474560 Apr 29 12:31 result.tar.gz
12:35:42 (1237016): run_atlas exited; CPU time 45176.006624
12:35:42 (1237016): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN