Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:59:45 (3508212): wrapper (7.7.26015): starting
04:59:45 (3508212): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 04:59:45] Arguments: --nthreads 12
[2026-04-27 04:59:45] Threads: 12
[2026-04-27 04:59:45] Checking for CVMFS
[2026-04-27 04:59:45] No cvmfs_config command found, will try listing directly
[2026-04-27 04:59:45] CVMFS is ok
[2026-04-27 04:59:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 04:59:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 04:59:45] Further information can be found at the LHC@home message board.
[2026-04-27 04:59:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 04:59:45] Checking for apptainer binary...
[2026-04-27 04:59:45] which: no apptainer in ((null))
[2026-04-27 04:59:45] apptainer is not installed, using version from CVMFS
[2026-04-27 04:59:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 04:59:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/21/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-04-27 04:59:45] apptainer works
[2026-04-27 04:59:45] Set ATHENA_PROC_NUMBER=12
[2026-04-27 04:59:45] Set ATHENA_CORE_NUMBER=12
[2026-04-27 04:59:45] Starting ATLAS job with PandaID=7116162308
[2026-04-27 04:59:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 05:42:07]  *** The last 200 lines of the pilot log: ***
[2026-04-27 05:42:07]  direct_access_wan=False
[2026-04-27 05:42:07]  domain=
[2026-04-27 05:42:07]  filesize=353475
[2026-04-27 05:42:07]  filetype=log
[2026-04-27 05:42:07]  guid=776b82f8-5e6b-4363-8dd7-9f998297583f
[2026-04-27 05:42:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 05:42:07]  is_altstaged=None
[2026-04-27 05:42:07]  is_tar=False
[2026-04-27 05:42:07]  lfn=log.49863694._002674.job.log.tgz.1
[2026-04-27 05:42:07]  mtime=0
[2026-04-27 05:42:07]  protocol_id=None
[2026-04-27 05:42:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 05:42:07]  replicas=None
[2026-04-27 05:42:07]  scope=mc23_13p6TeV
[2026-04-27 05:42:07]  status=None
[2026-04-27 05:42:07]  status_code=0
[2026-04-27 05:42:07]  storage_token=
[2026-04-27 05:42:07]  surl=/var/lib/boinc/var/slot72/slots/21/PanDA_Pilot-7116162308/log.49863694._002674.job.log.tgz.1
[2026-04-27 05:42:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/12/log.49863694._002674.job.log.tgz.1
[2026-04-27 05:42:07]  workdir=None
[2026-04-27 05:42:07] ]
[2026-04-27 05:42:07] 2026-04-27 03:41:02,658 | INFO     | transferring file log.49863694._002674.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/21/PanDA_Pilot-7116162308/log.49863694._002674.job.log.tgz.1 to /var/lib/
[2026-04-27 05:42:07] 2026-04-27 03:41:02,658 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/21/PanDA_Pilot-7116162308/log.49863694._002674.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/21/
[2026-04-27 05:42:07] 2026-04-27 03:41:02,677 | INFO     | adding to output.list: log.49863694._002674.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/12/log.49863694._002674.job.log.tg
[2026-04-27 05:42:07] 2026-04-27 03:41:02,678 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 05:42:07] 2026-04-27 03:41:02,678 | INFO     | summary of transferred files:
[2026-04-27 05:42:07] 2026-04-27 03:41:02,678 | INFO     |  -- lfn=log.49863694._002674.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 05:42:07] 2026-04-27 03:41:02,678 | INFO     | stage-out finished correctly
[2026-04-27 05:42:07] 2026-04-27 03:41:03,169 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 05:42:07] 2026-04-27 03:41:03,536 | INFO     | job 7116162308 has state=finished
[2026-04-27 05:42:07] 2026-04-27 03:41:03,536 | INFO     | preparing for final server update for job 7116162308 in state='finished'
[2026-04-27 05:42:07] 2026-04-27 03:41:03,536 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/21/PanDA_Pilot-7116162308/jobReport.json
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/21/workernode_map.json
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | this job has now completed (state=finished)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | log transfer has been attempted: DONE
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | job 7116162308 has finished - writing final server update
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3836001/.job.ad'
[2026-04-27 05:42:07] 2026-04-27 03:41:03,538 | INFO     | total number of processed events: 400 (read)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,555 | INFO     | using path: /var/lib/boinc/var/slot72/slots/21/PanDA_Pilot-7116162308/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,556 | INFO     | extracted standard info from prmon json
[2026-04-27 05:42:07] 2026-04-27 03:41:03,556 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 05:42:07] 2026-04-27 03:41:03,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 05:42:07] 2026-04-27 03:41:03,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | fitting pss+swap vs Time
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | sum of square deviations: 12176972.5
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | sum of deviations: 63060763.0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | mean x (centered): 0.0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | mean y: 2723819.470588235
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | intersect: 2723819.470588235
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | chi2: 0.0003972837530131975
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | current memory leak: 5.18 B/s (using 34 data points, chi2=0.00)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | could have reported an average CPU frequency of 3621 MHz (5 samples)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | ..............................
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | . Timing measurements:
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | . get job = 0 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,557 | INFO     | . initial setup = 4 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | . payload setup = 6 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | . stage-in = 0 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | . payload execution = 2444 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | . stage-out = 0 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | . log creation = 0 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,558 | INFO     | ..............................
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | 
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | job summary report
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | --------------------------------------------------
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | PanDA job id: 7116162308
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | task id: 49863694
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | errors: (none)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | pilot state: finished 
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | transexitcode: 0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | exeerrorcode: 0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | exeerrordiag: 
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | exitcode: 0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | exitmsg: OK
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | cpuconsumptiontime: 26218 s
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | nevents: 400
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | neventsw: 0
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | pid: 3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | pgrp: 3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | corecount: 12
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | event service: False
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | sizes: {0: 2274852, 1: 2276482, 11: 2276510, 2453: 2301748, 2454: 2310825, 2455: 2311179}
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | --------------------------------------------------
[2026-04-27 05:42:07] 2026-04-27 03:41:03,818 | INFO     | 
[2026-04-27 05:42:07] 2026-04-27 03:41:03,819 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/21
[2026-04-27 05:42:07] 2026-04-27 03:41:03,835 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,835 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | job 7116162308 has completed (purged errors)
[2026-04-27 05:42:07] 2026-04-27 03:41:03,836 | INFO     | overall cleanup function is called
[2026-04-27 05:42:07] 2026-04-27 03:41:04,843 | INFO     | --- collectZombieJob: --- 10, [3518822]
[2026-04-27 05:42:07] 2026-04-27 03:41:04,844 | INFO     | zombie collector waiting for pid 3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:04,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 05:42:07] 2026-04-27 03:41:04,844 | INFO     | collected zombie processes
[2026-04-27 05:42:07] 2026-04-27 03:41:04,844 | INFO     | will attempt to kill all subprocesses of pid=3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:05,177 | INFO     | process IDs to be killed: [3518822] (in reverse order)
[2026-04-27 05:42:07] 2026-04-27 03:41:05,324 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 05:42:07] 2026-04-27 03:41:05,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 05:42:07] 2026-04-27 03:41:05,346 | INFO     | did not find any defunct processes belonging to 3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:05,367 | INFO     | did not find any defunct processes belonging to 3518822
[2026-04-27 05:42:07] 2026-04-27 03:41:05,367 | INFO     | Ready for new job
[2026-04-27 05:42:07] 2026-04-27 03:41:05,368 | INFO     | ***************************************
[2026-04-27 05:42:07] 2026-04-27 03:41:05,368 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 05:42:07] 2026-04-27 03:41:05,368 | INFO     | ***************************************
[2026-04-27 05:42:07] 2026-04-27 03:41:05,368 | INFO     | 
[2026-04-27 05:42:07] 2026-04-27 03:41:05,374 | INFO     | architecture information:
[2026-04-27 05:42:07] 2026-04-27 03:41:05,374 | INFO     | executing command: cat /etc/os-release
[2026-04-27 05:42:07] 2026-04-27 03:41:05,387 | INFO     | cat /etc/os-release:
[2026-04-27 05:42:07] NAME="CentOS Linux"
[2026-04-27 05:42:07] VERSION="7 (Core)"
[2026-04-27 05:42:07] ID="centos"
[2026-04-27 05:42:07] ID_LIKE="rhel fedora"
[2026-04-27 05:42:07] VERSION_ID="7"
[2026-04-27 05:42:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 05:42:07] ANSI_COLOR="0;31"
[2026-04-27 05:42:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 05:42:07] HOME_URL="https://www.centos.org/"
[2026-04-27 05:42:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 05:42:07] 
[2026-04-27 05:42:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 05:42:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 05:42:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 05:42:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 05:42:07] 
[2026-04-27 05:42:07] 2026-04-27 03:41:05,388 | INFO     | ***************************************
[2026-04-27 05:42:07] 2026-04-27 03:41:05,890 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/21
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | INFO     | sufficient remaining disk space (19540213760 B)
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | INFO     | update_server=False
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 05:42:07] 2026-04-27 03:41:05,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 05:42:07] 2026-04-27 03:41:06,139 | INFO     | job.realtimelogging is not enabled
[2026-04-27 05:42:07] 2026-04-27 03:41:06,144 | INFO     | all data control threads have been joined
[2026-04-27 05:42:07] 2026-04-27 03:41:06,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 05:42:07] 2026-04-27 03:41:06,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 05:42:07] 2026-04-27 03:41:06,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 05:42:07] 2026-04-27 03:41:06,396 | INFO     | will abort loop
[2026-04-27 05:42:07] 2026-04-27 03:41:06,906 | INFO     | [job] retrieve thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,144 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,149 | INFO     | [data] control thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,226 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,338 | INFO     | all payload control threads have been joined
[2026-04-27 05:42:07] 2026-04-27 03:41:07,401 | INFO     | [job] job monitor thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,429 | INFO     | [payload] failed_post thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,520 | INFO     | all job control threads have been joined
[2026-04-27 05:42:07] 2026-04-27 03:41:07,791 | INFO     | [job] validate thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:07,907 | INFO     | [data] copytool_out thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,036 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,037 | INFO     | [payload] validate_post thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,207 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,296 | INFO     | [data] copytool_in thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,343 | INFO     | [payload] control thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,525 | INFO     | [job] control thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:08,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 05:42:07] 2026-04-27 03:41:09,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 05:42:07] 2026-04-27 03:41:09,619 | INFO     | [job] queue monitor thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:13,229 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 05:42:07] 2026-04-27 03:41:35,807 | INFO     | PID=3512804 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 05:42:07] 2026-04-27 03:41:35,807 | INFO     | .. there are 16 such processes running
[2026-04-27 05:42:07] 2026-04-27 03:41:35,808 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 05:42:07] 2026-04-27 03:41:35,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 05:42:07] 2026-04-27 03:41:35,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 05:42:07] 2026-04-27 03:42:00,960 | INFO     | [monitor] cgroup control has ended
[2026-04-27 05:42:07] 2026-04-27 03:42:02,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22837523707712)>', '<ExcThread(monitor, started 22837290354432)>']
[2026-04-27 05:42:07] 2026-04-27 03:42:02,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 05:42:07] 2026-04-27 03:42:02,943 | INFO     | [monitor] control thread has ended
[2026-04-27 05:42:07] 2026-04-27 03:42:07,454 | INFO     | all workflow threads have been joined
[2026-04-27 05:42:07] 2026-04-27 03:42:07,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 05:42:07] 2026-04-27 03:42:07,455 | INFO     | traces error code: 0
[2026-04-27 05:42:07] 2026-04-27 03:42:07,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 05:42:07] 2026-04-27 03:42:07,578 [wrapper] ==== pilot stdout END ====
[2026-04-27 05:42:07] 2026-04-27 03:42:07,580 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 05:42:07] 2026-04-27 03:42:07,582 [wrapper] pilotpid: 3512804
[2026-04-27 05:42:07] 2026-04-27 03:42:07,584 [wrapper] Pilot exit status: 0
[2026-04-27 05:42:07] 2026-04-27 03:42:07,593 [wrapper] pandaids: 7116162308
[2026-04-27 05:42:07] 2026-04-27 03:42:07,689 [wrapper] cleanup supervisor_pilot 3769407 3512805
[2026-04-27 05:42:07] 2026-04-27 03:42:07,691 [wrapper] Test setup, not cleaning
[2026-04-27 05:42:07] 2026-04-27 03:42:07,692 [wrapper] apfmon messages muted
[2026-04-27 05:42:07] 2026-04-27 03:42:07,694 [wrapper] ==== wrapper stdout END ====
[2026-04-27 05:42:07] 2026-04-27 03:42:07,695 [wrapper] ==== wrapper stderr END ====
[2026-04-27 05:42:07]  *** Error codes and diagnostics ***
[2026-04-27 05:42:07]     "exeErrorCode": 0,
[2026-04-27 05:42:07]     "pilotErrorCode": 0,
[2026-04-27 05:42:07]  *** Listing of results directory ***
[2026-04-27 05:42:07] total 470572
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc      5631 Apr 26 21:29 queuedata.json
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc    683926 Apr 26 21:29 pilot3.tar.gz
[2026-04-27 05:42:07] -rwx------. 1 boinc boinc     36322 Apr 26 21:29 runpilot2-wrapper.sh
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc       100 Apr 27 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 05:42:07] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 04:59 run_atlas
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc       105 Apr 27 04:59 job.xml
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc      6628 Apr 27 04:59 init_data.xml
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc 263423076 Apr 27 04:59 EVNT.49863691._000107.pool.root.1
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc     15667 Apr 27 04:59 start_atlas.sh
[2026-04-27 05:42:07] drwxrwx--x. 2 boinc boinc      4096 Apr 27 04:59 shared
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc    697416 Apr 27 04:59 input.tar.gz
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc         0 Apr 27 04:59 boinc_lockfile
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc      2581 Apr 27 04:59 pandaJob.out
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc    997530 Apr 27 04:59 agis_schedconf.cvmfs.json
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc   1509089 Apr 27 04:59 agis_ddmendpoints.agis.ALL.json
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc       443 Apr 27 04:59 workernode_map.json
[2026-04-27 05:42:07] drwx------. 5 boinc boinc      4096 Apr 27 04:59 pilot3
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc 213045920 Apr 27 05:40 HITS.49863694._002674.pool.root.1
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc        95 Apr 27 05:40 pilot_heartbeat.json
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc      1032 Apr 27 05:40 memory_monitor_summary.json
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc    353475 Apr 27 05:41 log.49863694._002674.job.log.tgz.1
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc       487 Apr 27 05:41 boinc_task_state.xml
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc      6375 Apr 27 05:41 heartbeat_new.json
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc      6266 Apr 27 05:41 heartbeat.json
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc      8192 Apr 27 05:42 boinc_mmap_file
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc        27 Apr 27 05:42 wrapper_checkpoint.txt
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc      5091 Apr 27 05:42 pilotlog.txt
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc    277894 Apr 27 05:42 log.49863694._002674.job.log.1
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc       357 Apr 27 05:42 output.list
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc       410 Apr 27 05:42 runtime_log
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc    645120 Apr 27 05:42 result.tar.gz
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc      8846 Apr 27 05:42 runtime_log.err
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc       661 Apr 27 05:42 679aeabbfd05.diag
[2026-04-27 05:42:07] -rw-r--r--. 1 boinc boinc     20808 Apr 27 05:42 stderr.txt
[2026-04-27 05:42:07] HITS file was successfully produced:
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc 213045920 Apr 27 05:40 shared/HITS.pool.root.1
[2026-04-27 05:42:07]  *** Contents of shared directory: ***
[2026-04-27 05:42:07] total 466648
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc 263423076 Apr 27 04:59 ATLAS.root_0
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc     15667 Apr 27 04:59 start_atlas.sh
[2026-04-27 05:42:07] -rw-r--r--. 2 boinc boinc    697416 Apr 27 04:59 input.tar.gz
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc 213045920 Apr 27 05:40 HITS.pool.root.1
[2026-04-27 05:42:07] -rw-------. 1 boinc boinc    645120 Apr 27 05:42 result.tar.gz
05:42:09 (3508212): run_atlas exited; CPU time 26290.218316
05:42:09 (3508212): called boinc_finish(0)

</stderr_txt>
]]>

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