Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:21:57 (1083560): wrapper (7.7.26015): starting
09:21:57 (1083560): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 09:21:57] Arguments: --nthreads 4
[2026-04-27 09:21:57] Threads: 4
[2026-04-27 09:21:57] Checking for CVMFS
[2026-04-27 09:21:57] No cvmfs_config command found, will try listing directly
[2026-04-27 09:21:57] CVMFS is ok
[2026-04-27 09:21:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 09:21:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 09:21:57] Further information can be found at the LHC@home message board.
[2026-04-27 09:21:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 09:21:57] Checking for apptainer binary...
[2026-04-27 09:21:57] which: no apptainer in ((null))
[2026-04-27 09:21:57] apptainer is not installed, using version from CVMFS
[2026-04-27 09:21:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 09:21:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-04-27 09:21:58] apptainer works
[2026-04-27 09:21:58] Set ATHENA_PROC_NUMBER=4
[2026-04-27 09:21:58] Set ATHENA_CORE_NUMBER=4
[2026-04-27 09:21:58] Starting ATLAS job with PandaID=7105138997
[2026-04-27 09:21:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 14:30:14]  *** The last 200 lines of the pilot log: ***
[2026-04-27 14:30:14] 2026-04-27 12:29:21,584 | INFO     | stage-out finished correctly
[2026-04-27 14:30:14] 2026-04-27 12:29:21,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 14:30:14] 2026-04-27 12:29:21,778 | INFO     | job 7105138997 has state=finished
[2026-04-27 14:30:14] 2026-04-27 12:29:21,779 | INFO     | preparing for final server update for job 7105138997 in state='finished'
[2026-04-27 14:30:14] 2026-04-27 12:29:21,780 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/0/PanDA_Pilot-7105138997/jobReport.json
[2026-04-27 14:30:14] 2026-04-27 12:29:21,782 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/0/workernode_map.json
[2026-04-27 14:30:14] 2026-04-27 12:29:21,782 | INFO     | this job has now completed (state=finished)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,782 | INFO     | log transfer has been attempted: DONE
[2026-04-27 14:30:14] 2026-04-27 12:29:21,783 | INFO     | job 7105138997 has finished - writing final server update
[2026-04-27 14:30:14] 2026-04-27 12:29:21,783 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1208307/.job.ad'
[2026-04-27 14:30:14] 2026-04-27 12:29:21,783 | INFO     | total number of processed events: 400 (read)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,806 | INFO     | using path: /var/lib/boinc/var/slot80/slots/0/PanDA_Pilot-7105138997/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,807 | INFO     | extracted standard info from prmon json
[2026-04-27 14:30:14] 2026-04-27 12:29:21,807 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 14:30:14] 2026-04-27 12:29:21,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 14:30:14] 2026-04-27 12:29:21,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 14:30:14] 2026-04-27 12:29:21,813 | INFO     | fitting pss+swap vs Time
[2026-04-27 14:30:14] 2026-04-27 12:29:21,813 | INFO     | sum of square deviations: 8456158550.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,815 | INFO     | sum of deviations: 5473447772.000005
[2026-04-27 14:30:14] 2026-04-27 12:29:21,815 | INFO     | mean x (centered): 0.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,815 | INFO     | mean y: 2382167.8205980067
[2026-04-27 14:30:14] 2026-04-27 12:29:21,816 | INFO     | intersect: 2382167.8205980067
[2026-04-27 14:30:14] 2026-04-27 12:29:21,816 | INFO     | chi2: 1.4009185682055763
[2026-04-27 14:30:14] 2026-04-27 12:29:21,816 | INFO     | sum of square deviations: 8041713570.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,818 | INFO     | sum of deviations: 5320307790.499997
[2026-04-27 14:30:14] 2026-04-27 12:29:21,818 | INFO     | mean x (centered): 0.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,819 | INFO     | mean y: 2382111.4493243243
[2026-04-27 14:30:14] 2026-04-27 12:29:21,819 | INFO     | intersect: 2382111.4493243243
[2026-04-27 14:30:14] 2026-04-27 12:29:21,819 | INFO     | chi2: 1.4010127101208034
[2026-04-27 14:30:14] 2026-04-27 12:29:21,819 | INFO     | current chi2=1.4010127101208034 (change=-0.006720013380060297 %)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,819 | INFO     | right removable region: 295
[2026-04-27 14:30:14] 2026-04-27 12:29:21,820 | INFO     | sum of square deviations: 8041713570.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | sum of deviations: -31015671674.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | mean x (centered): 0.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | mean y: 2395459.135135135
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | intersect: 2395459.135135135
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | chi2: 0.07916361961456708
[2026-04-27 14:30:14] 2026-04-27 12:29:21,822 | INFO     | current chi2=0.07916361961456708 (change=94.34916336957636 %)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,823 | INFO     | sum of square deviations: 7641036290.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,825 | INFO     | sum of deviations: -24432955738.000008
[2026-04-27 14:30:14] 2026-04-27 12:29:21,825 | INFO     | mean x (centered): 0.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,825 | INFO     | mean y: 2392943.6838487973
[2026-04-27 14:30:14] 2026-04-27 12:29:21,825 | INFO     | intersect: 2392943.6838487973
[2026-04-27 14:30:14] 2026-04-27 12:29:21,826 | INFO     | chi2: 0.06410642238242092
[2026-04-27 14:30:14] 2026-04-27 12:29:21,826 | INFO     | current chi2=0.06410642238242092 (change=19.02034963213765 %)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,826 | INFO     | left removable region: 10
[2026-04-27 14:30:14] 2026-04-27 12:29:21,826 | INFO     | sum of square deviations: 7178069470.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,828 | INFO     | sum of deviations: -24037738141.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,828 | INFO     | mean x (centered): 0.0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,829 | INFO     | mean y: 2393099.901754386
[2026-04-27 14:30:14] 2026-04-27 12:29:21,829 | INFO     | intersect: 2393099.901754386
[2026-04-27 14:30:14] 2026-04-27 12:29:21,829 | INFO     | chi2: 0.06361375156695637
[2026-04-27 14:30:14] 2026-04-27 12:29:21,829 | INFO     | current memory leak: -3.35 B/s (using 285 data points, chi2=0.06)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,830 | INFO     | could have reported an average CPU frequency of 2649 MHz (14 samples)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,830 | INFO     | ..............................
[2026-04-27 14:30:14] 2026-04-27 12:29:21,830 | INFO     | . Timing measurements:
[2026-04-27 14:30:14] 2026-04-27 12:29:21,830 | INFO     | . get job = 0 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,830 | INFO     | . initial setup = 13 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | . payload setup = 21 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | . stage-in = 0 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | . payload execution = 18366 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | . stage-out = 1 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | . log creation = 0 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,831 | INFO     | ..............................
[2026-04-27 14:30:14] 2026-04-27 12:29:21,927 | INFO     | 
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | job summary report
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | --------------------------------------------------
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | PanDA job id: 7105138997
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | task id: 49820244
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | errors: (none)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | pilot state: finished 
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | transexitcode: 0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | exeerrorcode: 0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | exeerrordiag: 
[2026-04-27 14:30:14] 2026-04-27 12:29:21,928 | INFO     | exitcode: 0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | exitmsg: OK
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | cpuconsumptiontime: 68885 s
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | nevents: 400
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | neventsw: 0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | pid: 1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | pgrp: 1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | corecount: 4
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | event service: False
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | sizes: {0: 2274760, 1: 2276390, 11: 2276418, 18391: 2309803, 18393: 2322624}
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | --------------------------------------------------
[2026-04-27 14:30:14] 2026-04-27 12:29:21,929 | INFO     | 
[2026-04-27 14:30:14] 2026-04-27 12:29:21,930 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/0
[2026-04-27 14:30:14] 2026-04-27 12:29:21,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | job 7105138997 has completed (purged errors)
[2026-04-27 14:30:14] 2026-04-27 12:29:21,963 | INFO     | overall cleanup function is called
[2026-04-27 14:30:14] 2026-04-27 12:29:22,976 | INFO     | --- collectZombieJob: --- 10, [1093652]
[2026-04-27 14:30:14] 2026-04-27 12:29:22,976 | INFO     | zombie collector waiting for pid 1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:22,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 14:30:14] 2026-04-27 12:29:22,976 | INFO     | collected zombie processes
[2026-04-27 14:30:14] 2026-04-27 12:29:22,976 | INFO     | will attempt to kill all subprocesses of pid=1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:23,736 | INFO     | process IDs to be killed: [1093652] (in reverse order)
[2026-04-27 14:30:14] 2026-04-27 12:29:24,068 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 14:30:14] 2026-04-27 12:29:24,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 14:30:14] 2026-04-27 12:29:24,105 | INFO     | did not find any defunct processes belonging to 1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:24,130 | INFO     | did not find any defunct processes belonging to 1093652
[2026-04-27 14:30:14] 2026-04-27 12:29:24,131 | INFO     | Ready for new job
[2026-04-27 14:30:14] 2026-04-27 12:29:24,134 | INFO     | ***************************************
[2026-04-27 14:30:14] 2026-04-27 12:29:24,134 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 14:30:14] 2026-04-27 12:29:24,134 | INFO     | ***************************************
[2026-04-27 14:30:14] 2026-04-27 12:29:24,134 | INFO     | 
[2026-04-27 14:30:14] 2026-04-27 12:29:24,142 | INFO     | architecture information:
[2026-04-27 14:30:14] 2026-04-27 12:29:24,143 | INFO     | executing command: cat /etc/os-release
[2026-04-27 14:30:14] 2026-04-27 12:29:24,175 | INFO     | cat /etc/os-release:
[2026-04-27 14:30:14] NAME="CentOS Linux"
[2026-04-27 14:30:14] VERSION="7 (Core)"
[2026-04-27 14:30:14] ID="centos"
[2026-04-27 14:30:14] ID_LIKE="rhel fedora"
[2026-04-27 14:30:14] VERSION_ID="7"
[2026-04-27 14:30:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 14:30:14] ANSI_COLOR="0;31"
[2026-04-27 14:30:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 14:30:14] HOME_URL="https://www.centos.org/"
[2026-04-27 14:30:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 14:30:14] 
[2026-04-27 14:30:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 14:30:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 14:30:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 14:30:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 14:30:14] 
[2026-04-27 14:30:14] 2026-04-27 12:29:24,176 | INFO     | ***************************************
[2026-04-27 14:30:14] 2026-04-27 12:29:24,678 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/0
[2026-04-27 14:30:14] 2026-04-27 12:29:24,703 | INFO     | sufficient remaining disk space (18982371328 B)
[2026-04-27 14:30:14] 2026-04-27 12:29:24,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 14:30:14] 2026-04-27 12:29:24,704 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 14:30:14] 2026-04-27 12:29:24,704 | INFO     | update_server=False
[2026-04-27 14:30:14] 2026-04-27 12:29:24,704 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 14:30:14] 2026-04-27 12:29:24,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 14:30:14] 2026-04-27 12:29:25,026 | INFO     | all data control threads have been joined
[2026-04-27 14:30:14] 2026-04-27 12:29:25,264 | INFO     | job.realtimelogging is not enabled
[2026-04-27 14:30:14] 2026-04-27 12:29:25,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 14:30:14] 2026-04-27 12:29:25,639 | INFO     | aborting loop
[2026-04-27 14:30:14] 2026-04-27 12:29:25,709 | INFO     | [job] retrieve thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:25,757 | INFO     | all job control threads have been joined
[2026-04-27 14:30:14] 2026-04-27 12:29:25,816 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:25,969 | INFO     | all payload control threads have been joined
[2026-04-27 14:30:14] 2026-04-27 12:29:26,031 | INFO     | [data] control thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,232 | INFO     | [data] copytool_in thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,257 | INFO     | [payload] validate_post thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,358 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,644 | INFO     | [job] job monitor thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,710 | INFO     | [data] copytool_out thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,733 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,762 | INFO     | [job] control thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,892 | INFO     | [payload] failed_post thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:26,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 14:30:14] 2026-04-27 12:29:26,974 | INFO     | [payload] control thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:27,091 | INFO     | [job] validate thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:27,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 14:30:14] 2026-04-27 12:29:27,943 | INFO     | [job] queue monitor thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:31,790 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 14:30:14] 2026-04-27 12:29:55,576 | INFO     | PID=1088235 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-27 14:30:14] 2026-04-27 12:29:55,576 | INFO     | .. there are 22 such processes running
[2026-04-27 14:30:14] 2026-04-27 12:29:55,580 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 14:30:14] 2026-04-27 12:29:55,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 14:30:14] 2026-04-27 12:29:55,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 14:30:14] 2026-04-27 12:30:08,009 | INFO     | [monitor] cgroup control has ended
[2026-04-27 14:30:14] 2026-04-27 12:30:08,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23301229172544)>', '<ExcThread(monitor, started 23300912662272)>']
[2026-04-27 14:30:14] 2026-04-27 12:30:09,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 14:30:14] 2026-04-27 12:30:09,654 | INFO     | [monitor] control thread has ended
[2026-04-27 14:30:14] 2026-04-27 12:30:13,799 | INFO     | all workflow threads have been joined
[2026-04-27 14:30:14] 2026-04-27 12:30:13,799 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 14:30:14] 2026-04-27 12:30:13,800 | INFO     | traces error code: 0
[2026-04-27 14:30:14] 2026-04-27 12:30:13,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 14:30:14] 2026-04-27 12:30:13,988 [wrapper] ==== pilot stdout END ====
[2026-04-27 14:30:14] 2026-04-27 12:30:13,992 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 14:30:14] 2026-04-27 12:30:13,996 [wrapper] pilotpid: 1088235
[2026-04-27 14:30:14] 2026-04-27 12:30:14,001 [wrapper] Pilot exit status: 0
[2026-04-27 14:30:14] 2026-04-27 12:30:14,017 [wrapper] pandaids: 7105138997
[2026-04-27 14:30:14] 2026-04-27 12:30:14,242 [wrapper] cleanup supervisor_pilot 1750393 1088236
[2026-04-27 14:30:14] 2026-04-27 12:30:14,247 [wrapper] Test setup, not cleaning
[2026-04-27 14:30:14] 2026-04-27 12:30:14,254 [wrapper] apfmon messages muted
[2026-04-27 14:30:14] 2026-04-27 12:30:14,258 [wrapper] ==== wrapper stdout END ====
[2026-04-27 14:30:14] 2026-04-27 12:30:14,262 [wrapper] ==== wrapper stderr END ====
[2026-04-27 14:30:14]  *** Error codes and diagnostics ***
[2026-04-27 14:30:14]     "exeErrorCode": 0,
[2026-04-27 14:30:14]     "pilotErrorCode": 0,
[2026-04-27 14:30:14]  *** Listing of results directory ***
[2026-04-27 14:30:14] total 2443476
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc     683926 Apr 26 20:58 pilot3.tar.gz
[2026-04-27 14:30:14] -rwx------. 1 boinc boinc      36322 Apr 26 21:12 runpilot2-wrapper.sh
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc       5631 Apr 26 21:16 queuedata.json
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc        100 Apr 27 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 14:30:14] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 09:21 run_atlas
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc        105 Apr 27 09:21 job.xml
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc 2226500010 Apr 27 09:21 EVNT.49820242._000036.pool.root.1
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc       6539 Apr 27 09:21 init_data.xml
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc      15667 Apr 27 09:21 start_atlas.sh
[2026-04-27 14:30:14] drwxrwx--x. 2 boinc boinc       4096 Apr 27 09:21 shared
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc     697414 Apr 27 09:21 input.tar.gz
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc          0 Apr 27 09:21 boinc_lockfile
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc       2551 Apr 27 09:21 pandaJob.out
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc     996855 Apr 27 09:22 agis_schedconf.cvmfs.json
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc        442 Apr 27 09:22 workernode_map.json
[2026-04-27 14:30:14] drwx------. 5 boinc boinc       4096 Apr 27 09:22 pilot3
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc  267359297 Apr 27 14:28 HITS.49820244._013322.pool.root.1
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc        488 Apr 27 14:28 boinc_task_state.xml
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc       1031 Apr 27 14:29 memory_monitor_summary.json
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc    1510700 Apr 27 14:29 agis_ddmendpoints.agis.ALL.json
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc     395860 Apr 27 14:29 log.49820244._013322.job.log.tgz.1
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc       6378 Apr 27 14:29 heartbeat_new.json
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc       6269 Apr 27 14:29 heartbeat.json
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc         95 Apr 27 14:29 pilot_heartbeat.json
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc       8192 Apr 27 14:30 boinc_mmap_file
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc       4905 Apr 27 14:30 pilotlog.txt
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc         27 Apr 27 14:30 wrapper_checkpoint.txt
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc    1666118 Apr 27 14:30 log.49820244._013322.job.log.1
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc        357 Apr 27 14:30 output.list
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc        410 Apr 27 14:30 runtime_log
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc    2078720 Apr 27 14:30 result.tar.gz
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc       8828 Apr 27 14:30 runtime_log.err
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc        666 Apr 27 14:30 63b524b82667.diag
[2026-04-27 14:30:14] -rw-r--r--. 1 boinc boinc      21001 Apr 27 14:30 stderr.txt
[2026-04-27 14:30:14] HITS file was successfully produced:
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc 267359297 Apr 27 14:28 shared/HITS.pool.root.1
[2026-04-27 14:30:14]  *** Contents of shared directory: ***
[2026-04-27 14:30:14] total 2438156
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc 2226500010 Apr 27 09:21 ATLAS.root_0
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc      15667 Apr 27 09:21 start_atlas.sh
[2026-04-27 14:30:14] -rw-r--r--. 2 boinc boinc     697414 Apr 27 09:21 input.tar.gz
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc  267359297 Apr 27 14:28 HITS.pool.root.1
[2026-04-27 14:30:14] -rw-------. 1 boinc boinc    2078720 Apr 27 14:30 result.tar.gz
14:30:16 (1083560): run_atlas exited; CPU time 70066.770303
14:30:16 (1083560): called boinc_finish(0)

</stderr_txt>
]]>

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