Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:07:01 (160485): wrapper (7.7.26015): starting
21:07:01 (160485): wrapper: running run_atlas (--nthreads 12)
[2026-04-26 21:07:01] Arguments: --nthreads 12
[2026-04-26 21:07:01] Threads: 12
[2026-04-26 21:07:01] Checking for CVMFS
[2026-04-26 21:07:01] No cvmfs_config command found, will try listing directly
[2026-04-26 21:07:01] CVMFS is ok
[2026-04-26 21:07:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-26 21:07:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-26 21:07:01] Further information can be found at the LHC@home message board.
[2026-04-26 21:07:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 21:07:01] Checking for apptainer binary...
[2026-04-26 21:07:01] which: no apptainer in ((null))
[2026-04-26 21:07:01] apptainer is not installed, using version from CVMFS
[2026-04-26 21:07:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 21:07:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/21/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-26 21:07:01] apptainer works
[2026-04-26 21:07:01] Set ATHENA_PROC_NUMBER=12
[2026-04-26 21:07:01] Set ATHENA_CORE_NUMBER=12
[2026-04-26 21:07:01] Starting ATLAS job with PandaID=7116135237
[2026-04-26 21:07:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 21:39:21]  *** The last 200 lines of the pilot log: ***
[2026-04-26 21:39:21]  filesize=350333
[2026-04-26 21:39:21]  filetype=log
[2026-04-26 21:39:21]  guid=09908194-3f02-45b4-b73a-62c5bf412f18
[2026-04-26 21:39:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-26 21:39:21]  is_altstaged=None
[2026-04-26 21:39:21]  is_tar=False
[2026-04-26 21:39:21]  lfn=log.49860684._000025.job.log.tgz.1
[2026-04-26 21:39:21]  mtime=0
[2026-04-26 21:39:21]  protocol_id=None
[2026-04-26 21:39:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-26 21:39:21]  replicas=None
[2026-04-26 21:39:21]  scope=mc23_13p6TeV
[2026-04-26 21:39:21]  status=None
[2026-04-26 21:39:21]  status_code=0
[2026-04-26 21:39:21]  storage_token=
[2026-04-26 21:39:21]  surl=/var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7116135237/log.49860684._000025.job.log.tgz.1
[2026-04-26 21:39:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/02/log.49860684._000025.job.log.tgz.1
[2026-04-26 21:39:21]  workdir=None
[2026-04-26 21:39:21] ]
[2026-04-26 21:39:21] 2026-04-26 19:38:24,555 | INFO     | transferring file log.49860684._000025.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7116135237/log.49860684._000025.job.log.tgz.1 to /var/lib/
[2026-04-26 21:39:21] 2026-04-26 19:38:24,555 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7116135237/log.49860684._000025.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/21/
[2026-04-26 21:39:21] 2026-04-26 19:38:24,572 | INFO     | adding to output.list: log.49860684._000025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/02/log.49860684._000025.job.log.tg
[2026-04-26 21:39:21] 2026-04-26 19:38:24,572 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-26 21:39:21] 2026-04-26 19:38:24,572 | INFO     | summary of transferred files:
[2026-04-26 21:39:21] 2026-04-26 19:38:24,572 | INFO     |  -- lfn=log.49860684._000025.job.log.tgz.1, status_code=0, status=transferred
[2026-04-26 21:39:21] 2026-04-26 19:38:24,572 | INFO     | stage-out finished correctly
[2026-04-26 21:39:21] 2026-04-26 19:38:25,488 | INFO     | monitor loop #144: job 0:7116135237 is in state 'finished'
[2026-04-26 21:39:21] 2026-04-26 19:38:25,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 21:39:21] 2026-04-26 19:38:27,991 | INFO     | monitor loop #145: job 0:7116135237 is in state 'finished'
[2026-04-26 21:39:21] 2026-04-26 19:38:27,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 21:39:21] 2026-04-26 19:38:28,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-26 21:39:21] 2026-04-26 19:38:29,292 | INFO     | job 7116135237 has state=finished
[2026-04-26 21:39:21] 2026-04-26 19:38:29,292 | INFO     | preparing for final server update for job 7116135237 in state='finished'
[2026-04-26 21:39:21] 2026-04-26 19:38:29,292 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7116135237/jobReport.json
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/21/workernode_map.json
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | INFO     | this job has now completed (state=finished)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | INFO     | log transfer has been attempted: DONE
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | INFO     | job 7116135237 has finished - writing final server update
[2026-04-26 21:39:21] 2026-04-26 19:38:29,294 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4113308/.job.ad'
[2026-04-26 21:39:21] 2026-04-26 19:38:29,295 | INFO     | total number of processed events: 400 (read)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,312 | INFO     | using path: /var/lib/boinc/var/slot60/slots/21/PanDA_Pilot-7116135237/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,313 | INFO     | extracted standard info from prmon json
[2026-04-26 21:39:21] 2026-04-26 19:38:29,313 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 21:39:21] 2026-04-26 19:38:29,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 21:39:21] 2026-04-26 19:38:29,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | fitting pss+swap vs Time
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | sum of square deviations: 4279150.0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | sum of deviations: 23665468.5
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | mean x (centered): 0.0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | mean y: 2714853.7916666665
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | intersect: 2714853.7916666665
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | chi2: 0.00011566894213329875
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | current memory leak: 5.53 B/s (using 24 data points, chi2=0.00)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | could have reported an average CPU frequency of 3635 MHz (5 samples)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | ..............................
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . Timing measurements:
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . get job = 0 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . initial setup = 4 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . payload setup = 5 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . stage-in = 0 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . payload execution = 1851 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . stage-out = 0 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | . log creation = 0 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,314 | INFO     | ..............................
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | 
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | job summary report
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | --------------------------------------------------
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | PanDA job id: 7116135237
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | task id: 49860684
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | errors: (none)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | pilot state: finished 
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | transexitcode: 0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | exeerrorcode: 0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | exeerrordiag: 
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | exitcode: 0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,365 | INFO     | exitmsg: OK
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | cpuconsumptiontime: 19825 s
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | nevents: 400
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | neventsw: 0
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | pid: 171520
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | pgrp: 171520
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | corecount: 12
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | event service: False
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | sizes: {0: 2274566, 1: 2276395, 11: 2276395, 1861: 2310328, 1865: 2310328, 1866: 2310554}
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | --------------------------------------------------
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | 
[2026-04-26 21:39:21] 2026-04-26 19:38:29,366 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/21
[2026-04-26 21:39:21] 2026-04-26 19:38:29,380 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | job 7116135237 has completed (purged errors)
[2026-04-26 21:39:21] 2026-04-26 19:38:29,381 | INFO     | overall cleanup function is called
[2026-04-26 21:39:21] 2026-04-26 19:38:30,389 | INFO     | --- collectZombieJob: --- 10, [171520]
[2026-04-26 21:39:21] 2026-04-26 19:38:30,389 | INFO     | zombie collector waiting for pid 171520
[2026-04-26 21:39:21] 2026-04-26 19:38:30,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 21:39:21] 2026-04-26 19:38:30,389 | INFO     | collected zombie processes
[2026-04-26 21:39:21] 2026-04-26 19:38:30,389 | INFO     | will attempt to kill all subprocesses of pid=171520
[2026-04-26 21:39:21] 2026-04-26 19:38:30,672 | INFO     | process IDs to be killed: [171520] (in reverse order)
[2026-04-26 21:39:21] 2026-04-26 19:38:30,815 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 21:39:21] 2026-04-26 19:38:30,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 21:39:21] 2026-04-26 19:38:30,838 | INFO     | did not find any defunct processes belonging to 171520
[2026-04-26 21:39:21] 2026-04-26 19:38:30,858 | INFO     | did not find any defunct processes belonging to 171520
[2026-04-26 21:39:21] 2026-04-26 19:38:30,859 | INFO     | Ready for new job
[2026-04-26 21:39:21] 2026-04-26 19:38:30,859 | INFO     | ***************************************
[2026-04-26 21:39:21] 2026-04-26 19:38:30,860 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 21:39:21] 2026-04-26 19:38:30,860 | INFO     | ***************************************
[2026-04-26 21:39:21] 2026-04-26 19:38:30,860 | INFO     | 
[2026-04-26 21:39:21] 2026-04-26 19:38:30,865 | INFO     | architecture information:
[2026-04-26 21:39:21] 2026-04-26 19:38:30,865 | INFO     | executing command: cat /etc/os-release
[2026-04-26 21:39:21] 2026-04-26 19:38:30,880 | INFO     | cat /etc/os-release:
[2026-04-26 21:39:21] NAME="CentOS Linux"
[2026-04-26 21:39:21] VERSION="7 (Core)"
[2026-04-26 21:39:21] ID="centos"
[2026-04-26 21:39:21] ID_LIKE="rhel fedora"
[2026-04-26 21:39:21] VERSION_ID="7"
[2026-04-26 21:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 21:39:21] ANSI_COLOR="0;31"
[2026-04-26 21:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 21:39:21] HOME_URL="https://www.centos.org/"
[2026-04-26 21:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 21:39:21] 
[2026-04-26 21:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 21:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 21:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 21:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 21:39:21] 
[2026-04-26 21:39:21] 2026-04-26 19:38:30,880 | INFO     | ***************************************
[2026-04-26 21:39:21] 2026-04-26 19:38:31,383 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/21
[2026-04-26 21:39:21] 2026-04-26 19:38:31,394 | INFO     | sufficient remaining disk space (19977469952 B)
[2026-04-26 21:39:21] 2026-04-26 19:38:31,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 21:39:21] 2026-04-26 19:38:31,394 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 21:39:21] 2026-04-26 19:38:31,394 | INFO     | update_server=False
[2026-04-26 21:39:21] 2026-04-26 19:38:31,394 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 21:39:21] 2026-04-26 19:38:31,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 21:39:21] 2026-04-26 19:38:31,495 | INFO     | aborting loop
[2026-04-26 21:39:21] 2026-04-26 19:38:31,997 | INFO     | all payload control threads have been joined
[2026-04-26 21:39:21] 2026-04-26 19:38:32,176 | INFO     | all job control threads have been joined
[2026-04-26 21:39:21] 2026-04-26 19:38:32,200 | INFO     | all data control threads have been joined
[2026-04-26 21:39:21] 2026-04-26 19:38:32,399 | INFO     | [job] retrieve thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:32,501 | INFO     | [job] job monitor thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:32,553 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:32,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 21:39:21] 2026-04-26 19:38:33,002 | INFO     | [payload] control thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,097 | INFO     | [payload] validate_post thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,181 | INFO     | [job] control thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,205 | INFO     | [data] control thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,485 | INFO     | [job] validate thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,562 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,660 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,715 | INFO     | [payload] failed_post thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:33,852 | INFO     | [data] copytool_in thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:34,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 21:39:21] 2026-04-26 19:38:34,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 21:39:21] 2026-04-26 19:38:34,638 | INFO     | [data] copytool_out thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:35,376 | INFO     | [job] queue monitor thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:38,102 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:38:42,126 | INFO     | job.realtimelogging is not enabled
[2026-04-26 21:39:21] 2026-04-26 19:38:43,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 21:39:21] 2026-04-26 19:39:02,655 | INFO     | PID=165165 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-26 21:39:21] 2026-04-26 19:39:02,656 | INFO     | .. there are 16 such processes running
[2026-04-26 21:39:21] 2026-04-26 19:39:02,657 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 21:39:21] 2026-04-26 19:39:02,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 21:39:21] 2026-04-26 19:39:02,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 21:39:21] 2026-04-26 19:39:14,979 | INFO     | [monitor] cgroup control has ended
[2026-04-26 21:39:21] 2026-04-26 19:39:15,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22560610383680)>', '<ExcThread(monitor, started 22560309008128)>']
[2026-04-26 21:39:21] 2026-04-26 19:39:16,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 21:39:21] 2026-04-26 19:39:16,727 | INFO     | [monitor] control thread has ended
[2026-04-26 21:39:21] 2026-04-26 19:39:20,902 | INFO     | all workflow threads have been joined
[2026-04-26 21:39:21] 2026-04-26 19:39:20,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 21:39:21] 2026-04-26 19:39:20,903 | INFO     | traces error code: 0
[2026-04-26 21:39:21] 2026-04-26 19:39:20,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 21:39:21] 2026-04-26 19:39:21,073 [wrapper] ==== pilot stdout END ====
[2026-04-26 21:39:21] 2026-04-26 19:39:21,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 21:39:21] 2026-04-26 19:39:21,077 [wrapper] pilotpid: 165165
[2026-04-26 21:39:21] 2026-04-26 19:39:21,079 [wrapper] Pilot exit status: 0
[2026-04-26 21:39:21] 2026-04-26 19:39:21,087 [wrapper] pandaids: 7116135237
[2026-04-26 21:39:21] 2026-04-26 19:39:21,191 [wrapper] cleanup supervisor_pilot  394207 165166
[2026-04-26 21:39:21] 2026-04-26 19:39:21,194 [wrapper] Test setup, not cleaning
[2026-04-26 21:39:21] 2026-04-26 19:39:21,196 [wrapper] apfmon messages muted
[2026-04-26 21:39:21] 2026-04-26 19:39:21,198 [wrapper] ==== wrapper stdout END ====
[2026-04-26 21:39:21] 2026-04-26 19:39:21,200 [wrapper] ==== wrapper stderr END ====
[2026-04-26 21:39:21]  *** Error codes and diagnostics ***
[2026-04-26 21:39:21]     "exeErrorCode": 0,
[2026-04-26 21:39:21]     "pilotErrorCode": 0,
[2026-04-26 21:39:21]  *** Listing of results directory ***
[2026-04-26 21:39:21] total 474332
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc    683926 Apr 26 18:08 pilot3.tar.gz
[2026-04-26 21:39:21] -rwx------. 1 boinc boinc     36322 Apr 26 18:55 runpilot2-wrapper.sh
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc      5631 Apr 26 18:56 queuedata.json
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc       100 Apr 26 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 21:39:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 21:06 run_atlas
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc       105 Apr 26 21:06 job.xml
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc      6627 Apr 26 21:07 init_data.xml
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc 300472490 Apr 26 21:07 EVNT.48751840._000001.pool.root.1
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:07 start_atlas.sh
[2026-04-26 21:39:21] drwxrwx--x. 2 boinc boinc      4096 Apr 26 21:07 shared
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc    697385 Apr 26 21:07 input.tar.gz
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc         0 Apr 26 21:07 boinc_lockfile
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc      2505 Apr 26 21:07 pandaJob.out
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc    997530 Apr 26 21:07 agis_schedconf.cvmfs.json
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc   1509089 Apr 26 21:07 agis_ddmendpoints.agis.ALL.json
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc       442 Apr 26 21:07 workernode_map.json
[2026-04-26 21:39:21] drwx------. 5 boinc boinc      4096 Apr 26 21:07 pilot3
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc 179961837 Apr 26 21:38 HITS.49860684._000025.pool.root.1
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc       487 Apr 26 21:38 boinc_task_state.xml
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc      1029 Apr 26 21:38 memory_monitor_summary.json
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc    350333 Apr 26 21:38 log.49860684._000025.job.log.tgz.1
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc      6357 Apr 26 21:38 heartbeat_new.json
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc      6248 Apr 26 21:38 heartbeat.json
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc        95 Apr 26 21:39 pilot_heartbeat.json
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc      8192 Apr 26 21:39 boinc_mmap_file
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc        27 Apr 26 21:39 wrapper_checkpoint.txt
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc      4904 Apr 26 21:39 pilotlog.txt
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc    224369 Apr 26 21:39 log.49860684._000025.job.log.1
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc       357 Apr 26 21:39 output.list
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc       410 Apr 26 21:39 runtime_log
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc    593920 Apr 26 21:39 result.tar.gz
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc      8846 Apr 26 21:39 runtime_log.err
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc       661 Apr 26 21:39 4368cb487d07.diag
[2026-04-26 21:39:21] -rw-r--r--. 1 boinc boinc     21004 Apr 26 21:39 stderr.txt
[2026-04-26 21:39:21] HITS file was successfully produced:
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc 179961837 Apr 26 21:38 shared/HITS.pool.root.1
[2026-04-26 21:39:21]  *** Contents of shared directory: ***
[2026-04-26 21:39:21] total 470464
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc 300472490 Apr 26 21:07 ATLAS.root_0
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:07 start_atlas.sh
[2026-04-26 21:39:21] -rw-r--r--. 2 boinc boinc    697385 Apr 26 21:07 input.tar.gz
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc 179961837 Apr 26 21:38 HITS.pool.root.1
[2026-04-26 21:39:21] -rw-------. 1 boinc boinc    593920 Apr 26 21:39 result.tar.gz
21:39:22 (160485): run_atlas exited; CPU time 19873.673284
21:39:22 (160485): called boinc_finish(0)

</stderr_txt>
]]>

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