Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:17 (3565006): wrapper (7.7.26015): starting
01:13:17 (3565006): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 01:13:17] Arguments: --nthreads 12
[2026-04-27 01:13:17] Threads: 12
[2026-04-27 01:13:17] Checking for CVMFS
[2026-04-27 01:13:17] No cvmfs_config command found, will try listing directly
[2026-04-27 01:13:17] CVMFS is ok
[2026-04-27 01:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 01:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 01:13:17] Further information can be found at the LHC@home message board.
[2026-04-27 01:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 01:13:17] Checking for apptainer binary...
[2026-04-27 01:13:17] which: no apptainer in ((null))
[2026-04-27 01:13:17] apptainer is not installed, using version from CVMFS
[2026-04-27 01:13:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 01:13:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/22/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-04-27 01:13:17] apptainer works
[2026-04-27 01:13:17] Set ATHENA_PROC_NUMBER=12
[2026-04-27 01:13:17] Set ATHENA_CORE_NUMBER=12
[2026-04-27 01:13:17] Starting ATLAS job with PandaID=7116160366
[2026-04-27 01:13:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 01:52:39]  *** The last 200 lines of the pilot log: ***
[2026-04-27 01:52:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 01:52:39]  replicas=None
[2026-04-27 01:52:39]  scope=mc23_13p6TeV
[2026-04-27 01:52:39]  status=None
[2026-04-27 01:52:39]  status_code=0
[2026-04-27 01:52:39]  storage_token=
[2026-04-27 01:52:39]  surl=/var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/log.49863733._000476.job.log.tgz.1
[2026-04-27 01:52:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/fc/log.49863733._000476.job.log.tgz.1
[2026-04-27 01:52:39]  workdir=None
[2026-04-27 01:52:39] ]
[2026-04-27 01:52:39] 2026-04-26 23:51:38,413 | INFO     | transferring file log.49863733._000476.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/log.49863733._000476.job.log.tgz.1 to /var/lib/
[2026-04-27 01:52:39] 2026-04-26 23:51:38,413 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/log.49863733._000476.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/22/
[2026-04-27 01:52:39] 2026-04-26 23:51:38,433 | INFO     | adding to output.list: log.49863733._000476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/fc/log.49863733._000476.job.log.tg
[2026-04-27 01:52:39] 2026-04-26 23:51:38,434 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 01:52:39] 2026-04-26 23:51:38,434 | INFO     | summary of transferred files:
[2026-04-27 01:52:39] 2026-04-26 23:51:38,434 | INFO     |  -- lfn=log.49863733._000476.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 01:52:39] 2026-04-26 23:51:38,434 | INFO     | stage-out finished correctly
[2026-04-27 01:52:39] 2026-04-26 23:51:38,937 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 01:52:39] 2026-04-26 23:51:38,985 | INFO     | job 7116160366 has state=finished
[2026-04-27 01:52:39] 2026-04-26 23:51:38,985 | INFO     | preparing for final server update for job 7116160366 in state='finished'
[2026-04-27 01:52:39] 2026-04-26 23:51:38,985 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/jobReport.json
[2026-04-27 01:52:39] 2026-04-26 23:51:38,987 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/22/workernode_map.json
[2026-04-27 01:52:39] 2026-04-26 23:51:38,987 | INFO     | this job has now completed (state=finished)
[2026-04-27 01:52:39] 2026-04-26 23:51:38,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 01:52:39] 2026-04-26 23:51:38,987 | INFO     | log transfer has been attempted: DONE
[2026-04-27 01:52:39] 2026-04-26 23:51:38,988 | INFO     | job 7116160366 has finished - writing final server update
[2026-04-27 01:52:39] 2026-04-26 23:51:38,990 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1393901/.job.ad'
[2026-04-27 01:52:39] 2026-04-26 23:51:38,990 | INFO     | total number of processed events: 400 (read)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,008 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,009 | INFO     | extracted standard info from prmon json
[2026-04-27 01:52:39] 2026-04-26 23:51:39,009 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 01:52:39] 2026-04-26 23:51:39,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 01:52:39] 2026-04-26 23:51:39,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | fitting pss+swap vs Time
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | sum of square deviations: 9228080.0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | sum of deviations: -116794442.99999996
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | mean x (centered): 0.0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | mean y: 2731526.129032258
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | intersect: 2731526.129032258
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | chi2: 0.00015411013719979005
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | current memory leak: -12.66 B/s (using 31 data points, chi2=0.00)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | could have reported an average CPU frequency of 3602 MHz (5 samples)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | ..............................
[2026-04-27 01:52:39] 2026-04-26 23:51:39,010 | INFO     | . Timing measurements:
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . get job = 0 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . initial setup = 4 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . payload setup = 5 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . stage-in = 0 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . payload execution = 2271 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . stage-out = 0 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | . log creation = 0 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,011 | INFO     | ..............................
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | 
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | job summary report
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | --------------------------------------------------
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | PanDA job id: 7116160366
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | task id: 49863733
[2026-04-27 01:52:39] 2026-04-26 23:51:39,416 | INFO     | errors: (none)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | pilot state: finished 
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | transexitcode: 0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | exeerrorcode: 0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | exeerrordiag: 
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | exitcode: 0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | exitmsg: OK
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | cpuconsumptiontime: 23550 s
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | nevents: 400
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | neventsw: 0
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | pid: 3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | pgrp: 3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | corecount: 12
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | event service: False
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | sizes: {0: 2276414, 11: 2276414, 2277: 2301529, 2278: 2310551, 2279: 2310833}
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | --------------------------------------------------
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | 
[2026-04-27 01:52:39] 2026-04-26 23:51:39,417 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/22
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 01:52:39] 2026-04-26 23:51:39,439 | INFO     | job 7116160366 has completed (purged errors)
[2026-04-27 01:52:39] 2026-04-26 23:51:39,439 | INFO     | overall cleanup function is called
[2026-04-27 01:52:39] 2026-04-26 23:51:40,446 | INFO     | --- collectZombieJob: --- 10, [3583990]
[2026-04-27 01:52:39] 2026-04-26 23:51:40,446 | INFO     | zombie collector waiting for pid 3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:40,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 01:52:39] 2026-04-26 23:51:40,446 | INFO     | collected zombie processes
[2026-04-27 01:52:39] 2026-04-26 23:51:40,446 | INFO     | will attempt to kill all subprocesses of pid=3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:40,737 | INFO     | process IDs to be killed: [3583990] (in reverse order)
[2026-04-27 01:52:39] 2026-04-26 23:51:40,879 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 01:52:39] 2026-04-26 23:51:40,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 01:52:39] 2026-04-26 23:51:40,903 | INFO     | did not find any defunct processes belonging to 3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:40,922 | INFO     | did not find any defunct processes belonging to 3583990
[2026-04-27 01:52:39] 2026-04-26 23:51:40,922 | INFO     | Ready for new job
[2026-04-27 01:52:39] 2026-04-26 23:51:40,924 | INFO     | ***************************************
[2026-04-27 01:52:39] 2026-04-26 23:51:40,924 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 01:52:39] 2026-04-26 23:51:40,924 | INFO     | ***************************************
[2026-04-27 01:52:39] 2026-04-26 23:51:40,924 | INFO     | 
[2026-04-27 01:52:39] 2026-04-26 23:51:40,929 | INFO     | architecture information:
[2026-04-27 01:52:39] 2026-04-26 23:51:40,929 | INFO     | executing command: cat /etc/os-release
[2026-04-27 01:52:39] 2026-04-26 23:51:40,944 | INFO     | cat /etc/os-release:
[2026-04-27 01:52:39] NAME="CentOS Linux"
[2026-04-27 01:52:39] VERSION="7 (Core)"
[2026-04-27 01:52:39] ID="centos"
[2026-04-27 01:52:39] ID_LIKE="rhel fedora"
[2026-04-27 01:52:39] VERSION_ID="7"
[2026-04-27 01:52:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 01:52:39] ANSI_COLOR="0;31"
[2026-04-27 01:52:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 01:52:39] HOME_URL="https://www.centos.org/"
[2026-04-27 01:52:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 01:52:39] 
[2026-04-27 01:52:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 01:52:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 01:52:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 01:52:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 01:52:39] 
[2026-04-27 01:52:39] 2026-04-26 23:51:40,944 | INFO     | ***************************************
[2026-04-27 01:52:39] 2026-04-26 23:51:41,445 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/22
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | INFO     | sufficient remaining disk space (13068402688 B)
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | INFO     | update_server=False
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 01:52:39] 2026-04-26 23:51:41,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 01:52:39] 2026-04-26 23:51:41,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 01:52:39] 2026-04-26 23:51:41,653 | INFO     | all job control threads have been joined
[2026-04-27 01:52:39] 2026-04-26 23:51:42,034 | INFO     | all data control threads have been joined
[2026-04-27 01:52:39] 2026-04-26 23:51:42,469 | INFO     | [job] retrieve thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:42,542 | INFO     | [payload] failed_post thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:42,574 | INFO     | all payload control threads have been joined
[2026-04-27 01:52:39] 2026-04-26 23:51:42,658 | INFO     | [job] control thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:42,739 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,040 | INFO     | [data] control thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,085 | INFO     | [payload] validate_post thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,493 | INFO     | [job] validate thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,494 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,496 | INFO     | [data] copytool_out thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,579 | INFO     | [payload] control thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,637 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:43,930 | INFO     | [data] copytool_in thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:44,022 | WARNING  | process 3583990 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 01:52:39] 2026-04-26 23:51:44,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 01:52:39] 2026-04-26 23:51:44,284 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 01:52:39] 2026-04-26 23:51:44,284 | INFO     | using path: /var/lib/boinc/var/slot72/slots/22/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 01:52:39] 2026-04-26 23:51:44,284 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-27 01:52:39] 2026-04-26 23:51:44,284 | WARNING  | maxPSS not found in memory monitor output
[2026-04-27 01:52:39] 2026-04-26 23:51:44,285 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/payload.stdout) since it has not been created yet
[2026-04-27 01:52:39] 2026-04-26 23:51:44,285 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/22
[2026-04-27 01:52:39] 2026-04-26 23:51:44,302 | INFO     | sufficient remaining disk space (13064208384 B)
[2026-04-27 01:52:39] 2026-04-26 23:51:44,302 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-27 01:52:39] 2026-04-26 23:51:44,302 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/22/PanDA_Pilot-7116160366/HITS.49863733._000476.pool.root.1 since it does not exist
[2026-04-27 01:52:39] 2026-04-26 23:51:44,595 | INFO     | number of running child processes to parent process 3583990: 1
[2026-04-27 01:52:39] 2026-04-26 23:51:44,595 | INFO     | maximum number of monitored processes: 6
[2026-04-27 01:52:39] 2026-04-26 23:51:44,595 | INFO     | aborting job monitoring since job object (job id=7116160366) has expired
[2026-04-27 01:52:39] 2026-04-26 23:51:44,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 01:52:39] 2026-04-26 23:51:44,595 | INFO     | will abort loop
[2026-04-27 01:52:39] 2026-04-26 23:51:45,075 | INFO     | [job] queue monitor thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:45,470 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:45,600 | INFO     | [job] job monitor thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:51:46,351 | INFO     | job.realtimelogging is not enabled
[2026-04-27 01:52:39] 2026-04-26 23:51:47,356 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 01:52:39] 2026-04-26 23:52:11,878 | INFO     | PID=3569949 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 01:52:39] 2026-04-26 23:52:11,878 | INFO     | .. there are 16 such processes running
[2026-04-27 01:52:39] 2026-04-26 23:52:11,878 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 01:52:39] 2026-04-26 23:52:11,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 01:52:39] 2026-04-26 23:52:11,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 01:52:39] 2026-04-26 23:52:32,170 | INFO     | [monitor] cgroup control has ended
[2026-04-27 01:52:39] 2026-04-26 23:52:33,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22452369889088)>', '<ExcThread(monitor, started 22452069451520)>']
[2026-04-27 01:52:39] 2026-04-26 23:52:33,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 01:52:39] 2026-04-26 23:52:33,988 | INFO     | [monitor] control thread has ended
[2026-04-27 01:52:39] 2026-04-26 23:52:38,702 | INFO     | all workflow threads have been joined
[2026-04-27 01:52:39] 2026-04-26 23:52:38,703 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 01:52:39] 2026-04-26 23:52:38,703 | INFO     | traces error code: 0
[2026-04-27 01:52:39] 2026-04-26 23:52:38,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 01:52:39] 2026-04-26 23:52:38,868 [wrapper] ==== pilot stdout END ====
[2026-04-27 01:52:39] 2026-04-26 23:52:38,870 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 01:52:39] 2026-04-26 23:52:38,872 [wrapper] pilotpid: 3569949
[2026-04-27 01:52:39] 2026-04-26 23:52:38,875 [wrapper] Pilot exit status: 0
[2026-04-27 01:52:39] 2026-04-26 23:52:38,884 [wrapper] pandaids: 7116160366
[2026-04-27 01:52:39] 2026-04-26 23:52:38,985 [wrapper] cleanup supervisor_pilot 3817141 3569950
[2026-04-27 01:52:39] 2026-04-26 23:52:38,988 [wrapper] Test setup, not cleaning
[2026-04-27 01:52:39] 2026-04-26 23:52:38,990 [wrapper] apfmon messages muted
[2026-04-27 01:52:39] 2026-04-26 23:52:38,992 [wrapper] ==== wrapper stdout END ====
[2026-04-27 01:52:39] 2026-04-26 23:52:38,995 [wrapper] ==== wrapper stderr END ====
[2026-04-27 01:52:39]  *** Error codes and diagnostics ***
[2026-04-27 01:52:39]     "exeErrorCode": 0,
[2026-04-27 01:52:39]     "pilotErrorCode": 0,
[2026-04-27 01:52:39]  *** Listing of results directory ***
[2026-04-27 01:52:39] total 461532
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc    683926 Apr 26 19:56 pilot3.tar.gz
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc      5631 Apr 26 20:13 queuedata.json
[2026-04-27 01:52:39] -rwx------. 1 boinc boinc     36322 Apr 26 20:13 runpilot2-wrapper.sh
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc       100 Apr 27 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 01:52:39] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 01:13 run_atlas
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc       105 Apr 27 01:13 job.xml
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc      6627 Apr 27 01:13 init_data.xml
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc 258777536 Apr 27 01:13 EVNT.49863730._000022.pool.root.1
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc     15667 Apr 27 01:13 start_atlas.sh
[2026-04-27 01:52:39] drwxrwx--x. 2 boinc boinc      4096 Apr 27 01:13 shared
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc    697408 Apr 27 01:13 input.tar.gz
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc         0 Apr 27 01:13 boinc_lockfile
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc      2569 Apr 27 01:13 pandaJob.out
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc    997538 Apr 27 01:13 agis_schedconf.cvmfs.json
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc   1509089 Apr 27 01:13 agis_ddmendpoints.agis.ALL.json
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc       443 Apr 27 01:13 workernode_map.json
[2026-04-27 01:52:39] drwx------. 5 boinc boinc      4096 Apr 27 01:13 pilot3
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc       487 Apr 27 01:51 boinc_task_state.xml
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc 208519306 Apr 27 01:51 HITS.49863733._000476.pool.root.1
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc        95 Apr 27 01:51 pilot_heartbeat.json
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc      1023 Apr 27 01:51 memory_monitor_summary.json
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc    324894 Apr 27 01:51 log.49863733._000476.job.log.tgz.1
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc      6361 Apr 27 01:51 heartbeat_new.json
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc      6252 Apr 27 01:51 heartbeat.json
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc      8192 Apr 27 01:52 boinc_mmap_file
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc        27 Apr 27 01:52 wrapper_checkpoint.txt
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc      6450 Apr 27 01:52 pilotlog.txt
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc    261342 Apr 27 01:52 log.49863733._000476.job.log.1
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc       357 Apr 27 01:52 output.list
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc       410 Apr 27 01:52 runtime_log
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc    604160 Apr 27 01:52 result.tar.gz
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc      8846 Apr 27 01:52 runtime_log.err
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc       661 Apr 27 01:52 55e4247b0f8e.diag
[2026-04-27 01:52:39] -rw-r--r--. 1 boinc boinc     21904 Apr 27 01:52 stderr.txt
[2026-04-27 01:52:39] HITS file was successfully produced:
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc 208519306 Apr 27 01:51 shared/HITS.pool.root.1
[2026-04-27 01:52:39]  *** Contents of shared directory: ***
[2026-04-27 01:52:39] total 457652
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc 258777536 Apr 27 01:13 ATLAS.root_0
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc     15667 Apr 27 01:13 start_atlas.sh
[2026-04-27 01:52:39] -rw-r--r--. 2 boinc boinc    697408 Apr 27 01:13 input.tar.gz
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc 208519306 Apr 27 01:51 HITS.pool.root.1
[2026-04-27 01:52:39] -rw-------. 1 boinc boinc    604160 Apr 27 01:52 result.tar.gz
01:52:40 (3565006): run_atlas exited; CPU time 23615.067235
01:52:40 (3565006): called boinc_finish(0)

</stderr_txt>
]]>

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