Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:16:46 (8169): wrapper (7.7.26015): starting
09:16:46 (8169): wrapper: running run_atlas (--nthreads 8)
[2026-04-27 09:16:46] Arguments: --nthreads 8
[2026-04-27 09:16:46] Threads: 8
[2026-04-27 09:16:46] Checking for CVMFS
[2026-04-27 09:16:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 09:16:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 09:16:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 09:16:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 09:16:53] 2.11.2.0 16919 16707 100800 158919 1 53 21213535 25165824 96 130560 0 5695798 99.916 5870620 12448 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-27 09:16:53] CVMFS is ok
[2026-04-27 09:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 09:16:53] Checking for apptainer binary...
[2026-04-27 09:16:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-27 09:16:53] Running /usr/bin/apptainer --version
[2026-04-27 09:16:53] apptainer version 1.3.2-1.el7
[2026-04-27 09:16:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 09:17:15] cg-vwn361.simple-grid.lan
[2026-04-27 09:17:15] apptainer works
[2026-04-27 09:17:15] Set ATHENA_PROC_NUMBER=8
[2026-04-27 09:17:15] Set ATHENA_CORE_NUMBER=8
[2026-04-27 09:17:15] Starting ATLAS job with PandaID=7105229459
[2026-04-27 09:17:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 16:17:39]  *** The last 200 lines of the pilot log: ***
[2026-04-27 16:17:39] 2026-04-27 14:16:56,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 16:17:39] 2026-04-27 14:16:56,630 | INFO     | fitting pss+swap vs Time
[2026-04-27 16:17:39] 2026-04-27 14:16:56,631 | INFO     | sum of square deviations: 19549015839.5
[2026-04-27 16:17:39] 2026-04-27 14:16:56,636 | INFO     | sum of deviations: 285335224795.99994
[2026-04-27 16:17:39] 2026-04-27 14:16:56,636 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,636 | INFO     | mean y: 2494790.4522613063
[2026-04-27 16:17:39] 2026-04-27 14:16:56,637 | INFO     | intersect: 2494790.4522613063
[2026-04-27 16:17:39] 2026-04-27 14:16:56,637 | INFO     | chi2: 11.665464992424564
[2026-04-27 16:17:39] 2026-04-27 14:16:56,638 | INFO     | sum of square deviations: 18821458012.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,643 | INFO     | sum of deviations: 308269086196.99994
[2026-04-27 16:17:39] 2026-04-27 14:16:56,643 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,644 | INFO     | mean y: 2499539.9872773536
[2026-04-27 16:17:39] 2026-04-27 14:16:56,644 | INFO     | intersect: 2499539.9872773536
[2026-04-27 16:17:39] 2026-04-27 14:16:56,644 | INFO     | chi2: 10.966427651551173
[2026-04-27 16:17:39] 2026-04-27 14:16:56,645 | INFO     | current chi2=10.966427651551173 (change=5.992365853631538 %)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,645 | INFO     | right removable region: 392
[2026-04-27 16:17:39] 2026-04-27 14:16:56,645 | INFO     | sum of square deviations: 18821458012.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,650 | INFO     | sum of deviations: 134741113004.99997
[2026-04-27 16:17:39] 2026-04-27 14:16:56,650 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,651 | INFO     | mean y: 2526356.4427480916
[2026-04-27 16:17:39] 2026-04-27 14:16:56,651 | INFO     | intersect: 2526356.4427480916
[2026-04-27 16:17:39] 2026-04-27 14:16:56,651 | INFO     | chi2: 6.034375710169147
[2026-04-27 16:17:39] 2026-04-27 14:16:56,652 | INFO     | current chi2=6.034375710169147 (change=48.271451553043015 %)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,652 | INFO     | sum of square deviations: 18112179597.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,657 | INFO     | sum of deviations: 7793945905.000015
[2026-04-27 16:17:39] 2026-04-27 14:16:56,658 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,658 | INFO     | mean y: 2553643.8041237113
[2026-04-27 16:17:39] 2026-04-27 14:16:56,658 | INFO     | intersect: 2553643.8041237113
[2026-04-27 16:17:39] 2026-04-27 14:16:56,659 | INFO     | chi2: 2.2910354675309383
[2026-04-27 16:17:39] 2026-04-27 14:16:56,659 | INFO     | current chi2=2.2910354675309383 (change=62.0335958917825 %)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,659 | INFO     | sum of square deviations: 17420948032.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,664 | INFO     | sum of deviations: -60893205165.00001
[2026-04-27 16:17:39] 2026-04-27 14:16:56,664 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,664 | INFO     | mean y: 2568742.3315926893
[2026-04-27 16:17:39] 2026-04-27 14:16:56,664 | INFO     | intersect: 2568742.3315926893
[2026-04-27 16:17:39] 2026-04-27 14:16:56,665 | INFO     | chi2: 0.95316754676917
[2026-04-27 16:17:39] 2026-04-27 14:16:56,665 | INFO     | current chi2=0.95316754676917 (change=58.39577517338027 %)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,666 | INFO     | sum of square deviations: 16747530754.5
[2026-04-27 16:17:39] 2026-04-27 14:16:56,671 | INFO     | sum of deviations: -65648311203.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,671 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,671 | INFO     | mean y: 2569810.7354497355
[2026-04-27 16:17:39] 2026-04-27 14:16:56,671 | INFO     | intersect: 2569810.7354497355
[2026-04-27 16:17:39] 2026-04-27 14:16:56,672 | INFO     | chi2: 0.9329517961161106
[2026-04-27 16:17:39] 2026-04-27 14:16:56,672 | INFO     | current chi2=0.9329517961161106 (change=2.1209021143850535 %)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,672 | INFO     | left removable region: 20
[2026-04-27 16:17:39] 2026-04-27 14:16:56,673 | INFO     | sum of square deviations: 15962617433.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,677 | INFO     | sum of deviations: -39477754544.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,678 | INFO     | mean x (centered): 0.0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,678 | INFO     | mean y: 2575832.564516129
[2026-04-27 16:17:39] 2026-04-27 14:16:56,678 | INFO     | intersect: 2575832.564516129
[2026-04-27 16:17:39] 2026-04-27 14:16:56,679 | INFO     | chi2: 0.15027313717185958
[2026-04-27 16:17:39] 2026-04-27 14:16:56,679 | INFO     | current memory leak: -2.47 B/s (using 372 data points, chi2=0.15)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | ..............................
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . Timing measurements:
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . get job = 0 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . initial setup = 168 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . payload setup = 252 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . stage-in = 0 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,680 | INFO     | . payload execution = 24393 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,681 | INFO     | . stage-out = 4 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,681 | INFO     | . log creation = 1 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,681 | INFO     | ..............................
[2026-04-27 16:17:39] 2026-04-27 14:16:56,835 | INFO     | 
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | job summary report
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | --------------------------------------------------
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | PanDA job id: 7105229459
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | task id: 49820375
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | errors: (none)
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | pilot state: finished 
[2026-04-27 16:17:39] 2026-04-27 14:16:56,836 | INFO     | transexitcode: 0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | exeerrorcode: 0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | exeerrordiag: 
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | exitcode: 0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | exitmsg: OK
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | cpuconsumptiontime: 100834 s
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | nevents: 400
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | neventsw: 0
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | pid: 16629
[2026-04-27 16:17:39] 2026-04-27 14:16:56,837 | INFO     | pgrp: 16629
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | corecount: 8
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | event service: False
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | sizes: {0: 2274611, 1: 2275012, 2: 2276468, 12: 2276468, 24649: 2311805, 24655: 2320507, 24657: 2320949}
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | --------------------------------------------------
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | 
[2026-04-27 16:17:39] 2026-04-27 14:16:56,838 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-27 16:17:39] 2026-04-27 14:16:57,410 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | job 7105229459 has completed (purged errors)
[2026-04-27 16:17:39] 2026-04-27 14:16:57,413 | INFO     | overall cleanup function is called
[2026-04-27 16:17:39] 2026-04-27 14:16:58,422 | INFO     | --- collectZombieJob: --- 10, [16629]
[2026-04-27 16:17:39] 2026-04-27 14:16:58,422 | INFO     | zombie collector waiting for pid 16629
[2026-04-27 16:17:39] 2026-04-27 14:16:58,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 16:17:39] 2026-04-27 14:16:58,422 | INFO     | collected zombie processes
[2026-04-27 16:17:39] 2026-04-27 14:16:58,423 | INFO     | will attempt to kill all subprocesses of pid=16629
[2026-04-27 16:17:39] 2026-04-27 14:16:58,501 | INFO     | process IDs to be killed: [16629] (in reverse order)
[2026-04-27 16:17:39] 2026-04-27 14:16:59,378 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 16:17:39] 2026-04-27 14:16:59,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 16:17:39] 2026-04-27 14:16:59,380 | INFO     | did not find any defunct processes belonging to 16629
[2026-04-27 16:17:39] 2026-04-27 14:16:59,382 | INFO     | did not find any defunct processes belonging to 16629
[2026-04-27 16:17:39] 2026-04-27 14:16:59,382 | INFO     | Ready for new job
[2026-04-27 16:17:39] 2026-04-27 14:16:59,384 | INFO     | ***************************************
[2026-04-27 16:17:39] 2026-04-27 14:16:59,384 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 16:17:39] 2026-04-27 14:16:59,384 | INFO     | ***************************************
[2026-04-27 16:17:39] 2026-04-27 14:16:59,385 | INFO     | 
[2026-04-27 16:17:39] 2026-04-27 14:16:59,385 | INFO     | pilot is running in a VM
[2026-04-27 16:17:39] 2026-04-27 14:16:59,385 | INFO     | architecture information:
[2026-04-27 16:17:39] 2026-04-27 14:16:59,394 | INFO     | executing command: cat /etc/os-release
[2026-04-27 16:17:39] 2026-04-27 14:16:59,747 | INFO     | cat /etc/os-release:
[2026-04-27 16:17:39] NAME="CentOS Linux"
[2026-04-27 16:17:39] VERSION="7 (Core)"
[2026-04-27 16:17:39] ID="centos"
[2026-04-27 16:17:39] ID_LIKE="rhel fedora"
[2026-04-27 16:17:39] VERSION_ID="7"
[2026-04-27 16:17:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 16:17:39] ANSI_COLOR="0;31"
[2026-04-27 16:17:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 16:17:39] HOME_URL="https://www.centos.org/"
[2026-04-27 16:17:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 16:17:39] 
[2026-04-27 16:17:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 16:17:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 16:17:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 16:17:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 16:17:39] 
[2026-04-27 16:17:39] 2026-04-27 14:16:59,748 | INFO     | ***************************************
[2026-04-27 16:17:39] 2026-04-27 14:17:00,251 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-27 16:17:39] 2026-04-27 14:17:00,432 | INFO     | sufficient remaining disk space (488770633728 B)
[2026-04-27 16:17:39] 2026-04-27 14:17:00,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 16:17:39] 2026-04-27 14:17:00,433 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 16:17:39] 2026-04-27 14:17:00,433 | INFO     | update_server=False
[2026-04-27 16:17:39] 2026-04-27 14:17:00,433 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 16:17:39] 2026-04-27 14:17:00,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 16:17:39] 2026-04-27 14:17:00,713 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 16:17:39] 2026-04-27 14:17:00,713 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 16:17:39] 2026-04-27 14:17:00,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:17:39] 2026-04-27 14:17:00,714 | INFO     | will abort loop
[2026-04-27 16:17:39] 2026-04-27 14:17:00,749 | INFO     | all data control threads have been joined
[2026-04-27 16:17:39] 2026-04-27 14:17:01,054 | INFO     | all job control threads have been joined
[2026-04-27 16:17:39] 2026-04-27 14:17:01,162 | INFO     | all payload control threads have been joined
[2026-04-27 16:17:39] 2026-04-27 14:17:01,439 | INFO     | [job] retrieve thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:01,578 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:01,719 | INFO     | [job] job monitor thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:01,755 | INFO     | [data] control thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:01,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:17:39] 2026-04-27 14:17:02,060 | INFO     | [job] control thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,168 | INFO     | [payload] control thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,201 | INFO     | [job] validate thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,441 | INFO     | [data] copytool_out thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,532 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 16:17:39] 2026-04-27 14:17:02,662 | INFO     | [payload] validate_post thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,713 | INFO     | [data] copytool_in thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,737 | INFO     | [payload] failed_post thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,863 | INFO     | [job] queue monitor thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:02,867 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:06,632 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 16:17:39] 2026-04-27 14:17:27,435 | INFO     | [monitor] cgroup control has ended
[2026-04-27 16:17:39] 2026-04-27 14:17:28,590 | INFO     | PID=12155 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 16:17:39] 2026-04-27 14:17:28,590 | INFO     | .. there are 2 such processes running
[2026-04-27 16:17:39] 2026-04-27 14:17:28,591 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 16:17:39] 2026-04-27 14:17:28,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 16:17:39] 2026-04-27 14:17:28,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 16:17:39] 2026-04-27 14:17:28,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203356084032)>', '<ExcThread(monitor, started 140203058505472)>']
[2026-04-27 16:17:39] 2026-04-27 14:17:29,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 16:17:39] 2026-04-27 14:17:29,598 | INFO     | [monitor] control thread has ended
[2026-04-27 16:17:39] 2026-04-27 14:17:33,993 | INFO     | all workflow threads have been joined
[2026-04-27 16:17:39] 2026-04-27 14:17:33,993 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 16:17:39] 2026-04-27 14:17:33,993 | INFO     | traces error code: 0
[2026-04-27 16:17:39] 2026-04-27 14:17:33,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 16:17:39] 2026-04-27 14:17:34,322 [wrapper] ==== pilot stdout END ====
[2026-04-27 16:17:39] 2026-04-27 14:17:34,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 16:17:39] 2026-04-27 14:17:34,465 [wrapper] pilotpid: 12155
[2026-04-27 16:17:39] 2026-04-27 14:17:34,584 [wrapper] Pilot exit status: 0
[2026-04-27 16:17:39] 2026-04-27 14:17:35,182 [wrapper] pandaids: 7105229459
[2026-04-27 16:17:39] 2026-04-27 14:17:36,023 [wrapper] cleanup supervisor_pilot  4331 12156
[2026-04-27 16:17:39] 2026-04-27 14:17:36,113 [wrapper] Test setup, not cleaning
[2026-04-27 16:17:39] 2026-04-27 14:17:36,216 [wrapper] apfmon messages muted
[2026-04-27 16:17:39] 2026-04-27 14:17:36,276 [wrapper] ==== wrapper stdout END ====
[2026-04-27 16:17:39] 2026-04-27 14:17:36,354 [wrapper] ==== wrapper stderr END ====
[2026-04-27 16:17:39]  *** Error codes and diagnostics ***
[2026-04-27 16:17:39]     "exeErrorCode": 0,
[2026-04-27 16:17:39]     "pilotErrorCode": 0,
[2026-04-27 16:17:39]  *** Listing of results directory ***
[2026-04-27 16:17:39] total 2455456
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc     683926 Apr 26 19:56 pilot3.tar.gz
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc       5631 Apr 26 20:00 queuedata.json
[2026-04-27 16:17:39] -rwx------. 1 boinc boinc      36322 Apr 26 20:00 runpilot2-wrapper.sh
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc        100 Apr 27 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 16:17:39] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 09:16 run_atlas
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc        105 Apr 27 09:16 job.xml
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc 2233515068 Apr 27 09:16 EVNT.49820373._000038.pool.root.1
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc       6305 Apr 27 09:16 init_data.xml
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc      15667 Apr 27 09:16 start_atlas.sh
[2026-04-27 16:17:39] drwxrwx--x. 2 boinc boinc         68 Apr 27 09:16 shared
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc     697429 Apr 27 09:16 input.tar.gz
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc          0 Apr 27 09:16 boinc_lockfile
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc       2585 Apr 27 09:17 pandaJob.out
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc        415 Apr 27 09:25 workernode_map.json
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc     996855 Apr 27 09:25 agis_schedconf.cvmfs.json
[2026-04-27 16:17:39] drwx------. 5 boinc boinc       4096 Apr 27 09:25 pilot3
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc  271224296 Apr 27 16:15 HITS.49820375._010416.pool.root.1
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc        491 Apr 27 16:15 boinc_task_state.xml
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc       1021 Apr 27 16:16 memory_monitor_summary.json
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc    1508585 Apr 27 16:16 agis_ddmendpoints.agis.ALL.json
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc     499249 Apr 27 16:16 log.49820375._010416.job.log.tgz.1
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc       6351 Apr 27 16:16 heartbeat_new.json
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc       6242 Apr 27 16:16 heartbeat.json
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc         29 Apr 27 16:17 wrapper_checkpoint.txt
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc       8192 Apr 27 16:17 boinc_mmap_file
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc         95 Apr 27 16:17 pilot_heartbeat.json
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc       5069 Apr 27 16:17 pilotlog.txt
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc    2263222 Apr 27 16:17 log.49820375._010416.job.log.1
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc        357 Apr 27 16:17 output.list
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc        410 Apr 27 16:17 runtime_log
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc    2785280 Apr 27 16:17 result.tar.gz
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc       8439 Apr 27 16:17 runtime_log.err
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc        657 Apr 27 16:17 52d14f592afa.diag
[2026-04-27 16:17:39] -rw-r--r--. 1 boinc boinc      20492 Apr 27 16:17 stderr.txt
[2026-04-27 16:17:39] HITS file was successfully produced:
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc 271224296 Apr 27 16:15 shared/HITS.pool.root.1
[2026-04-27 16:17:39]  *** Contents of shared directory: ***
[2026-04-27 16:17:39] total 2449456
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc 2233515068 Apr 27 09:16 ATLAS.root_0
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc      15667 Apr 27 09:16 start_atlas.sh
[2026-04-27 16:17:39] -rw-r--r--. 2 boinc boinc     697429 Apr 27 09:16 input.tar.gz
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc  271224296 Apr 27 16:15 HITS.pool.root.1
[2026-04-27 16:17:39] -rw-------. 1 boinc boinc    2785280 Apr 27 16:17 result.tar.gz
16:17:41 (8169): run_atlas exited; CPU time 101082.868333
16:17:41 (8169): called boinc_finish(0)

</stderr_txt>
]]>

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