Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:12 (3201471): wrapper (7.7.26015): starting
13:30:12 (3201471): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 13:30:12] Arguments: --nthreads 12
[2026-04-27 13:30:12] Threads: 12
[2026-04-27 13:30:12] Checking for CVMFS
[2026-04-27 13:30:12] No cvmfs_config command found, will try listing directly
[2026-04-27 13:30:12] CVMFS is ok
[2026-04-27 13:30:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 13:30:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 13:30:12] Further information can be found at the LHC@home message board.
[2026-04-27 13:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 13:30:12] Checking for apptainer binary...
[2026-04-27 13:30:12] which: no apptainer in ((null))
[2026-04-27 13:30:12] apptainer is not installed, using version from CVMFS
[2026-04-27 13:30:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 13:30:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-04-27 13:30:12] apptainer works
[2026-04-27 13:30:12] Set ATHENA_PROC_NUMBER=12
[2026-04-27 13:30:12] Set ATHENA_CORE_NUMBER=12
[2026-04-27 13:30:12] Starting ATLAS job with PandaID=7105079751
[2026-04-27 13:30:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 14:20:33]  *** The last 200 lines of the pilot log: ***
[2026-04-27 14:20:33]  direct_access_wan=False
[2026-04-27 14:20:33]  domain=
[2026-04-27 14:20:33]  filesize=376692
[2026-04-27 14:20:33]  filetype=log
[2026-04-27 14:20:33]  guid=43e89e61-0219-4417-9ee2-e11f048cd9c1
[2026-04-27 14:20:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 14:20:33]  is_altstaged=None
[2026-04-27 14:20:33]  is_tar=False
[2026-04-27 14:20:33]  lfn=log.49820375._009711.job.log.tgz.1
[2026-04-27 14:20:33]  mtime=0
[2026-04-27 14:20:33]  protocol_id=None
[2026-04-27 14:20:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 14:20:33]  replicas=None
[2026-04-27 14:20:33]  scope=mc23_13p6TeV
[2026-04-27 14:20:33]  status=None
[2026-04-27 14:20:33]  status_code=0
[2026-04-27 14:20:33]  storage_token=
[2026-04-27 14:20:33]  surl=/var/lib/boinc/var/slot228/slots/2/PanDA_Pilot-7105079751/log.49820375._009711.job.log.tgz.1
[2026-04-27 14:20:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/f1/log.49820375._009711.job.log.tgz.1
[2026-04-27 14:20:33]  workdir=None
[2026-04-27 14:20:33] ]
[2026-04-27 14:20:33] 2026-04-27 12:19:44,718 | INFO     | transferring file log.49820375._009711.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/2/PanDA_Pilot-7105079751/log.49820375._009711.job.log.tgz.1 to /var/lib/
[2026-04-27 14:20:33] 2026-04-27 12:19:44,718 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/2/PanDA_Pilot-7105079751/log.49820375._009711.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/2/
[2026-04-27 14:20:33] 2026-04-27 12:19:44,736 | INFO     | adding to output.list: log.49820375._009711.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/f1/log.49820375._009711.job.log.tg
[2026-04-27 14:20:33] 2026-04-27 12:19:44,737 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 14:20:33] 2026-04-27 12:19:44,737 | INFO     | summary of transferred files:
[2026-04-27 14:20:33] 2026-04-27 12:19:44,737 | INFO     |  -- lfn=log.49820375._009711.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 14:20:33] 2026-04-27 12:19:44,737 | INFO     | stage-out finished correctly
[2026-04-27 14:20:33] 2026-04-27 12:19:44,784 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 14:20:33] 2026-04-27 12:19:44,894 | INFO     | monitor loop #223: job 0:7105079751 is in state 'finished'
[2026-04-27 14:20:33] 2026-04-27 12:19:44,895 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,145 | INFO     | job 7105079751 has state=finished
[2026-04-27 14:20:33] 2026-04-27 12:19:46,145 | INFO     | preparing for final server update for job 7105079751 in state='finished'
[2026-04-27 14:20:33] 2026-04-27 12:19:46,146 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/2/PanDA_Pilot-7105079751/jobReport.json
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/2/workernode_map.json
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | this job has now completed (state=finished)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | log transfer has been attempted: DONE
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | job 7105079751 has finished - writing final server update
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2080709/.job.ad'
[2026-04-27 14:20:33] 2026-04-27 12:19:46,148 | INFO     | total number of processed events: 400 (read)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,166 | INFO     | using path: /var/lib/boinc/var/slot228/slots/2/PanDA_Pilot-7105079751/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,166 | INFO     | extracted standard info from prmon json
[2026-04-27 14:20:33] 2026-04-27 12:19:46,166 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 14:20:33] 2026-04-27 12:19:46,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 14:20:33] 2026-04-27 12:19:46,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 14:20:33] 2026-04-27 12:19:46,167 | INFO     | fitting pss+swap vs Time
[2026-04-27 14:20:33] 2026-04-27 12:19:46,167 | INFO     | sum of square deviations: 22960430.5
[2026-04-27 14:20:33] 2026-04-27 12:19:46,167 | INFO     | sum of deviations: 486936678.5
[2026-04-27 14:20:33] 2026-04-27 12:19:46,167 | INFO     | mean x (centered): 0.0
[2026-04-27 14:20:33] 2026-04-27 12:19:46,167 | INFO     | mean y: 2749962.4523809524
[2026-04-27 14:20:33] 2026-04-27 12:19:46,168 | INFO     | intersect: 2749962.4523809524
[2026-04-27 14:20:33] 2026-04-27 12:19:46,168 | INFO     | chi2: 0.0003325185041684685
[2026-04-27 14:20:33] 2026-04-27 12:19:46,168 | INFO     | current memory leak: 21.21 B/s (using 42 data points, chi2=0.00)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | could have reported an average CPU frequency of 3627 MHz (5 samples)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | ..............................
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . Timing measurements:
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . get job = 0 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . initial setup = 4 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . payload setup = 6 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . stage-in = 0 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . payload execution = 2940 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . stage-out = 0 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | . log creation = 0 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,171 | INFO     | ..............................
[2026-04-27 14:20:33] 2026-04-27 12:19:46,219 | INFO     | 
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | job summary report
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | --------------------------------------------------
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | PanDA job id: 7105079751
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | task id: 49820375
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | errors: (none)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | pilot state: finished 
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | transexitcode: 0
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | exeerrorcode: 0
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | exeerrordiag: 
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | exitcode: 0
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | exitmsg: OK
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | cpuconsumptiontime: 32032 s
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | nevents: 400
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | neventsw: 0
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | pid: 3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | pgrp: 3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | corecount: 12
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | event service: False
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | sizes: {0: 2280033, 11: 2280033, 2950: 2314489, 2951: 2314489, 2952: 2314715}
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | --------------------------------------------------
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | 
[2026-04-27 14:20:33] 2026-04-27 12:19:46,220 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/2
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | job 7105079751 has completed (purged errors)
[2026-04-27 14:20:33] 2026-04-27 12:19:46,233 | INFO     | overall cleanup function is called
[2026-04-27 14:20:33] 2026-04-27 12:19:47,240 | INFO     | --- collectZombieJob: --- 10, [3211870]
[2026-04-27 14:20:33] 2026-04-27 12:19:47,240 | INFO     | zombie collector waiting for pid 3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:47,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 14:20:33] 2026-04-27 12:19:47,240 | INFO     | collected zombie processes
[2026-04-27 14:20:33] 2026-04-27 12:19:47,240 | INFO     | will attempt to kill all subprocesses of pid=3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:47,536 | INFO     | process IDs to be killed: [3211870] (in reverse order)
[2026-04-27 14:20:33] 2026-04-27 12:19:47,677 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 14:20:33] 2026-04-27 12:19:47,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 14:20:33] 2026-04-27 12:19:47,701 | INFO     | did not find any defunct processes belonging to 3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:47,723 | INFO     | did not find any defunct processes belonging to 3211870
[2026-04-27 14:20:33] 2026-04-27 12:19:47,724 | INFO     | Ready for new job
[2026-04-27 14:20:33] 2026-04-27 12:19:47,725 | INFO     | ***************************************
[2026-04-27 14:20:33] 2026-04-27 12:19:47,725 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 14:20:33] 2026-04-27 12:19:47,725 | INFO     | ***************************************
[2026-04-27 14:20:33] 2026-04-27 12:19:47,725 | INFO     | 
[2026-04-27 14:20:33] 2026-04-27 12:19:47,730 | INFO     | architecture information:
[2026-04-27 14:20:33] 2026-04-27 12:19:47,731 | INFO     | executing command: cat /etc/os-release
[2026-04-27 14:20:33] 2026-04-27 12:19:47,741 | INFO     | cat /etc/os-release:
[2026-04-27 14:20:33] NAME="CentOS Linux"
[2026-04-27 14:20:33] VERSION="7 (Core)"
[2026-04-27 14:20:33] ID="centos"
[2026-04-27 14:20:33] ID_LIKE="rhel fedora"
[2026-04-27 14:20:33] VERSION_ID="7"
[2026-04-27 14:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 14:20:33] ANSI_COLOR="0;31"
[2026-04-27 14:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 14:20:33] HOME_URL="https://www.centos.org/"
[2026-04-27 14:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 14:20:33] 
[2026-04-27 14:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 14:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 14:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 14:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 14:20:33] 
[2026-04-27 14:20:33] 2026-04-27 12:19:47,742 | INFO     | ***************************************
[2026-04-27 14:20:33] 2026-04-27 12:19:48,245 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/2
[2026-04-27 14:20:33] 2026-04-27 12:19:48,260 | INFO     | sufficient remaining disk space (18471714816 B)
[2026-04-27 14:20:33] 2026-04-27 12:19:48,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 14:20:33] 2026-04-27 12:19:48,261 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 14:20:33] 2026-04-27 12:19:48,261 | INFO     | update_server=False
[2026-04-27 14:20:33] 2026-04-27 12:19:48,261 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 14:20:33] 2026-04-27 12:19:48,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 14:20:33] 2026-04-27 12:19:48,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 14:20:33] 2026-04-27 12:19:48,402 | INFO     | aborting loop
[2026-04-27 14:20:33] 2026-04-27 12:19:48,878 | INFO     | all payload control threads have been joined
[2026-04-27 14:20:33] 2026-04-27 12:19:48,980 | INFO     | all job control threads have been joined
[2026-04-27 14:20:33] 2026-04-27 12:19:49,181 | INFO     | all data control threads have been joined
[2026-04-27 14:20:33] 2026-04-27 12:19:49,266 | INFO     | [job] retrieve thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,407 | INFO     | [job] job monitor thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,411 | INFO     | [job] validate thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,653 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,653 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,655 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,883 | INFO     | [payload] control thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,913 | INFO     | [data] copytool_in thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,985 | INFO     | [job] control thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:49,985 | INFO     | [payload] validate_post thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:50,186 | INFO     | [data] control thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:50,267 | INFO     | [data] copytool_out thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:50,459 | INFO     | [payload] failed_post thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:50,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 14:20:33] 2026-04-27 12:19:51,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 14:20:33] 2026-04-27 12:19:52,235 | INFO     | [job] queue monitor thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:54,842 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:19:59,178 | INFO     | job.realtimelogging is not enabled
[2026-04-27 14:20:33] 2026-04-27 12:20:00,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 14:20:33] 2026-04-27 12:20:19,212 | INFO     | PID=3206013 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 14:20:33] 2026-04-27 12:20:19,212 | INFO     | .. there are 15 such processes running
[2026-04-27 14:20:33] 2026-04-27 12:20:19,212 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 14:20:33] 2026-04-27 12:20:19,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 14:20:33] 2026-04-27 12:20:19,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 14:20:33] 2026-04-27 12:20:27,217 | INFO     | [monitor] cgroup control has ended
[2026-04-27 14:20:33] 2026-04-27 12:20:27,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23294006015808)>', '<ExcThread(monitor, started 23293773235968)>']
[2026-04-27 14:20:33] 2026-04-27 12:20:28,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 14:20:33] 2026-04-27 12:20:28,258 | INFO     | [monitor] control thread has ended
[2026-04-27 14:20:33] 2026-04-27 12:20:32,765 | INFO     | all workflow threads have been joined
[2026-04-27 14:20:33] 2026-04-27 12:20:32,765 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 14:20:33] 2026-04-27 12:20:32,765 | INFO     | traces error code: 0
[2026-04-27 14:20:33] 2026-04-27 12:20:32,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 14:20:33] 2026-04-27 12:20:32,907 [wrapper] ==== pilot stdout END ====
[2026-04-27 14:20:33] 2026-04-27 12:20:32,909 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 14:20:33] 2026-04-27 12:20:32,912 [wrapper] pilotpid: 3206013
[2026-04-27 14:20:33] 2026-04-27 12:20:32,914 [wrapper] Pilot exit status: 0
[2026-04-27 14:20:33] 2026-04-27 12:20:32,922 [wrapper] pandaids: 7105079751
[2026-04-27 14:20:33] 2026-04-27 12:20:33,026 [wrapper] cleanup supervisor_pilot 3508240 3206014
[2026-04-27 14:20:33] 2026-04-27 12:20:33,029 [wrapper] Test setup, not cleaning
[2026-04-27 14:20:33] 2026-04-27 12:20:33,031 [wrapper] apfmon messages muted
[2026-04-27 14:20:33] 2026-04-27 12:20:33,032 [wrapper] ==== wrapper stdout END ====
[2026-04-27 14:20:33] 2026-04-27 12:20:33,033 [wrapper] ==== wrapper stderr END ====
[2026-04-27 14:20:33]  *** Error codes and diagnostics ***
[2026-04-27 14:20:33]     "exeErrorCode": 0,
[2026-04-27 14:20:33]     "pilotErrorCode": 0,
[2026-04-27 14:20:33]  *** Listing of results directory ***
[2026-04-27 14:20:33] total 2461124
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc       5631 Apr 26 00:09 queuedata.json
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc     683926 Apr 26 00:09 pilot3.tar.gz
[2026-04-27 14:20:33] -rwx------. 1 boinc boinc      36322 Apr 26 00:11 runpilot2-wrapper.sh
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc        100 Apr 27 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 14:20:33] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 13:30 run_atlas
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc        105 Apr 27 13:30 job.xml
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc       6630 Apr 27 13:30 init_data.xml
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc 2248582226 Apr 27 13:30 EVNT.49820373._000031.pool.root.1
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc      15667 Apr 27 13:30 start_atlas.sh
[2026-04-27 14:20:33] drwxrwx--x. 2 boinc boinc       4096 Apr 27 13:30 shared
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc     697427 Apr 27 13:30 input.tar.gz
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc          0 Apr 27 13:30 boinc_lockfile
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc       2586 Apr 27 13:30 pandaJob.out
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc     996863 Apr 27 13:30 agis_schedconf.cvmfs.json
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc    1510700 Apr 27 13:30 agis_ddmendpoints.agis.ALL.json
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc        443 Apr 27 13:30 workernode_map.json
[2026-04-27 14:20:33] drwx------. 5 boinc boinc       4096 Apr 27 13:30 pilot3
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc  266076692 Apr 27 14:19 HITS.49820375._009711.pool.root.1
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc        488 Apr 27 14:19 boinc_task_state.xml
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc         95 Apr 27 14:19 pilot_heartbeat.json
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc       1028 Apr 27 14:19 memory_monitor_summary.json
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc     376692 Apr 27 14:19 log.49820375._009711.job.log.tgz.1
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc       6375 Apr 27 14:19 heartbeat_new.json
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc       6266 Apr 27 14:19 heartbeat.json
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc       8192 Apr 27 14:20 boinc_mmap_file
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc         27 Apr 27 14:20 wrapper_checkpoint.txt
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc       4905 Apr 27 14:20 pilotlog.txt
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc     321633 Apr 27 14:20 log.49820375._009711.job.log.1
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc        357 Apr 27 14:20 output.list
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc        410 Apr 27 14:20 runtime_log
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc     716800 Apr 27 14:20 result.tar.gz
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc       8846 Apr 27 14:20 runtime_log.err
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc        663 Apr 27 14:20 3c253ab90227.diag
[2026-04-27 14:20:33] -rw-r--r--. 1 boinc boinc      20827 Apr 27 14:20 stderr.txt
[2026-04-27 14:20:33] HITS file was successfully produced:
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc 266076692 Apr 27 14:19 shared/HITS.pool.root.1
[2026-04-27 14:20:33]  *** Contents of shared directory: ***
[2026-04-27 14:20:33] total 2457136
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc 2248582226 Apr 27 13:30 ATLAS.root_0
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc      15667 Apr 27 13:30 start_atlas.sh
[2026-04-27 14:20:33] -rw-r--r--. 2 boinc boinc     697427 Apr 27 13:30 input.tar.gz
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc  266076692 Apr 27 14:19 HITS.pool.root.1
[2026-04-27 14:20:33] -rw-------. 1 boinc boinc     716800 Apr 27 14:20 result.tar.gz
14:20:34 (3201471): run_atlas exited; CPU time 32125.474006
14:20:34 (3201471): called boinc_finish(0)

</stderr_txt>
]]>

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