Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:09 (623374): wrapper (7.7.26015): starting
16:02:09 (623374): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 16:02:09] Arguments: --nthreads 4
[2026-04-27 16:02:09] Threads: 4
[2026-04-27 16:02:09] Checking for CVMFS
[2026-04-27 16:02:09] No cvmfs_config command found, will try listing directly
[2026-04-27 16:02:09] CVMFS is ok
[2026-04-27 16:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 16:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 16:02:09] Further information can be found at the LHC@home message board.
[2026-04-27 16:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 16:02:09] Checking for apptainer binary...
[2026-04-27 16:02:09] which: no apptainer in ((null))
[2026-04-27 16:02:09] apptainer is not installed, using version from CVMFS
[2026-04-27 16:02:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 16:02:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-04-27 16:02:09] apptainer works
[2026-04-27 16:02:09] Set ATHENA_PROC_NUMBER=4
[2026-04-27 16:02:09] Set ATHENA_CORE_NUMBER=4
[2026-04-27 16:02:09] Starting ATLAS job with PandaID=7114695504
[2026-04-27 16:02:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 20:44:22]  *** The last 200 lines of the pilot log: ***
[2026-04-27 20:44:22] 2026-04-27 18:43:48,229 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,229 | INFO     | log transfer has been attempted: DONE
[2026-04-27 20:44:22] 2026-04-27 18:43:48,229 | INFO     | job 7114695504 has finished - writing final server update
[2026-04-27 20:44:22] 2026-04-27 18:43:48,229 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1636895/.job.ad'
[2026-04-27 20:44:22] 2026-04-27 18:43:48,230 | INFO     | total number of processed events: 400 (read)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,236 | INFO     | using path: /var/lib/boinc/var/slot16/slots/1/PanDA_Pilot-7114695504/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,237 | INFO     | extracted standard info from prmon json
[2026-04-27 20:44:22] 2026-04-27 18:43:48,237 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 20:44:22] 2026-04-27 18:43:48,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 20:44:22] 2026-04-27 18:43:48,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 20:44:22] 2026-04-27 18:43:48,243 | INFO     | fitting pss+swap vs Time
[2026-04-27 20:44:22] 2026-04-27 18:43:48,243 | INFO     | sum of square deviations: 6590404498.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,246 | INFO     | sum of deviations: 30286549348.999985
[2026-04-27 20:44:22] 2026-04-27 18:43:48,246 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,246 | INFO     | mean y: 2331069.187725632
[2026-04-27 20:44:22] 2026-04-27 18:43:48,246 | INFO     | intersect: 2331069.187725632
[2026-04-27 20:44:22] 2026-04-27 18:43:48,247 | INFO     | chi2: 1.9858594196520722
[2026-04-27 20:44:22] 2026-04-27 18:43:48,247 | INFO     | sum of square deviations: 6239923508.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,250 | INFO     | sum of deviations: 46596670422.99999
[2026-04-27 20:44:22] 2026-04-27 18:43:48,250 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,250 | INFO     | mean y: 2338056.080882353
[2026-04-27 20:44:22] 2026-04-27 18:43:48,250 | INFO     | intersect: 2338056.080882353
[2026-04-27 20:44:22] 2026-04-27 18:43:48,251 | INFO     | chi2: 1.214872758308808
[2026-04-27 20:44:22] 2026-04-27 18:43:48,251 | INFO     | current chi2=1.214872758308808 (change=38.823828802460916 %)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,251 | INFO     | sum of square deviations: 5902093918.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,253 | INFO     | sum of deviations: 45264397239.00001
[2026-04-27 20:44:22] 2026-04-27 18:43:48,254 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,254 | INFO     | mean y: 2337454.7453183522
[2026-04-27 20:44:22] 2026-04-27 18:43:48,254 | INFO     | intersect: 2337454.7453183522
[2026-04-27 20:44:22] 2026-04-27 18:43:48,254 | INFO     | chi2: 1.215151017739377
[2026-04-27 20:44:22] 2026-04-27 18:43:48,255 | INFO     | current chi2=1.215151017739377 (change=-0.02290440942608552 %)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,255 | INFO     | right removable region: 266
[2026-04-27 20:44:22] 2026-04-27 18:43:48,255 | INFO     | sum of square deviations: 6239923508.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,257 | INFO     | sum of deviations: 1532460604.9999924
[2026-04-27 20:44:22] 2026-04-27 18:43:48,258 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,258 | INFO     | mean y: 2343421.9264705884
[2026-04-27 20:44:22] 2026-04-27 18:43:48,258 | INFO     | intersect: 2343421.9264705884
[2026-04-27 20:44:22] 2026-04-27 18:43:48,258 | INFO     | chi2: 0.7935298829320828
[2026-04-27 20:44:22] 2026-04-27 18:43:48,258 | INFO     | current chi2=0.7935298829320828 (change=60.04098401531809 %)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,259 | INFO     | sum of square deviations: 5902093918.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,261 | INFO     | sum of deviations: -1110004433.999998
[2026-04-27 20:44:22] 2026-04-27 18:43:48,261 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,261 | INFO     | mean y: 2344603.3146067415
[2026-04-27 20:44:22] 2026-04-27 18:43:48,262 | INFO     | intersect: 2344603.3146067415
[2026-04-27 20:44:22] 2026-04-27 18:43:48,262 | INFO     | chi2: 0.7862007419877423
[2026-04-27 20:44:22] 2026-04-27 18:43:48,262 | INFO     | current chi2=0.7862007419877423 (change=0.9236124690426881 %)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,262 | INFO     | left removable region: 10
[2026-04-27 20:44:22] 2026-04-27 18:43:48,263 | INFO     | sum of square deviations: 5202255680.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,265 | INFO     | sum of deviations: 14310877001.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,265 | INFO     | mean x (centered): 0.0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,265 | INFO     | mean y: 2351694.6328125
[2026-04-27 20:44:22] 2026-04-27 18:43:48,265 | INFO     | intersect: 2351694.6328125
[2026-04-27 20:44:22] 2026-04-27 18:43:48,266 | INFO     | chi2: 0.002516311636085791
[2026-04-27 20:44:22] 2026-04-27 18:43:48,266 | INFO     | current memory leak: 2.75 B/s (using 256 data points, chi2=0.00)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,266 | INFO     | could have reported an average CPU frequency of 2631 MHz (13 samples)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | ..............................
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . Timing measurements:
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . get job = 0 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . initial setup = 5 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . payload setup = 9 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . stage-in = 0 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . payload execution = 16854 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . stage-out = 1 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,267 | INFO     | . log creation = 0 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,268 | INFO     | ..............................
[2026-04-27 20:44:22] 2026-04-27 18:43:48,369 | INFO     | 
[2026-04-27 20:44:22] 2026-04-27 18:43:48,369 | INFO     | job summary report
[2026-04-27 20:44:22] 2026-04-27 18:43:48,369 | INFO     | --------------------------------------------------
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | PanDA job id: 7114695504
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | task id: 49499859
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | errors: (none)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | pilot state: finished 
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | transexitcode: 0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | exeerrorcode: 0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,370 | INFO     | exeerrordiag: 
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | exitcode: 0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | exitmsg: OK
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | cpuconsumptiontime: 64180 s
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | nevents: 400
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | neventsw: 0
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | pid: 631983
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | pgrp: 631983
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | corecount: 4
[2026-04-27 20:44:22] 2026-04-27 18:43:48,371 | INFO     | event service: False
[2026-04-27 20:44:22] 2026-04-27 18:43:48,372 | INFO     | sizes: {0: 2274631, 1: 2276205, 11: 2276233, 16867: 2308054, 16868: 2308053, 16869: 2323475, 16872: 2323853}
[2026-04-27 20:44:22] 2026-04-27 18:43:48,372 | INFO     | --------------------------------------------------
[2026-04-27 20:44:22] 2026-04-27 18:43:48,372 | INFO     | 
[2026-04-27 20:44:22] 2026-04-27 18:43:48,372 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/1
[2026-04-27 20:44:22] 2026-04-27 18:43:48,390 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,390 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,390 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,390 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,392 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 20:44:22] 2026-04-27 18:43:48,393 | INFO     | job 7114695504 has completed (purged errors)
[2026-04-27 20:44:22] 2026-04-27 18:43:48,393 | INFO     | overall cleanup function is called
[2026-04-27 20:44:22] 2026-04-27 18:43:49,401 | INFO     | --- collectZombieJob: --- 10, [631983]
[2026-04-27 20:44:22] 2026-04-27 18:43:49,401 | INFO     | zombie collector waiting for pid 631983
[2026-04-27 20:44:22] 2026-04-27 18:43:49,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 20:44:22] 2026-04-27 18:43:49,401 | INFO     | collected zombie processes
[2026-04-27 20:44:22] 2026-04-27 18:43:49,401 | INFO     | will attempt to kill all subprocesses of pid=631983
[2026-04-27 20:44:22] 2026-04-27 18:43:49,613 | INFO     | process IDs to be killed: [631983] (in reverse order)
[2026-04-27 20:44:22] 2026-04-27 18:43:49,689 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 20:44:22] 2026-04-27 18:43:49,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 20:44:22] 2026-04-27 18:43:49,697 | INFO     | did not find any defunct processes belonging to 631983
[2026-04-27 20:44:22] 2026-04-27 18:43:49,702 | INFO     | did not find any defunct processes belonging to 631983
[2026-04-27 20:44:22] 2026-04-27 18:43:49,703 | INFO     | Ready for new job
[2026-04-27 20:44:22] 2026-04-27 18:43:49,705 | INFO     | ***************************************
[2026-04-27 20:44:22] 2026-04-27 18:43:49,705 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 20:44:22] 2026-04-27 18:43:49,705 | INFO     | ***************************************
[2026-04-27 20:44:22] 2026-04-27 18:43:49,705 | INFO     | 
[2026-04-27 20:44:22] 2026-04-27 18:43:49,707 | INFO     | architecture information:
[2026-04-27 20:44:22] 2026-04-27 18:43:49,707 | INFO     | executing command: cat /etc/os-release
[2026-04-27 20:44:22] 2026-04-27 18:43:49,719 | INFO     | cat /etc/os-release:
[2026-04-27 20:44:22] NAME="CentOS Linux"
[2026-04-27 20:44:22] VERSION="7 (Core)"
[2026-04-27 20:44:22] ID="centos"
[2026-04-27 20:44:22] ID_LIKE="rhel fedora"
[2026-04-27 20:44:22] VERSION_ID="7"
[2026-04-27 20:44:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 20:44:22] ANSI_COLOR="0;31"
[2026-04-27 20:44:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 20:44:22] HOME_URL="https://www.centos.org/"
[2026-04-27 20:44:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 20:44:22] 
[2026-04-27 20:44:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 20:44:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 20:44:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 20:44:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 20:44:22] 
[2026-04-27 20:44:22] 2026-04-27 18:43:49,719 | INFO     | ***************************************
[2026-04-27 20:44:22] 2026-04-27 18:43:50,222 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/1
[2026-04-27 20:44:22] 2026-04-27 18:43:50,236 | INFO     | sufficient remaining disk space (69007835136 B)
[2026-04-27 20:44:22] 2026-04-27 18:43:50,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 20:44:22] 2026-04-27 18:43:50,236 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 20:44:22] 2026-04-27 18:43:50,237 | INFO     | update_server=False
[2026-04-27 20:44:22] 2026-04-27 18:43:50,237 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 20:44:22] 2026-04-27 18:43:50,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 20:44:22] 2026-04-27 18:43:50,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 20:44:22] 2026-04-27 18:43:50,237 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-04-27 20:44:22] 2026-04-27 18:43:50,238 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 20:44:22] 2026-04-27 18:43:50,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 20:44:22] 2026-04-27 18:43:50,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 20:44:22] 2026-04-27 18:43:50,257 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 20:44:22] 2026-04-27 18:43:50,257 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 20:44:22] 2026-04-27 18:43:50,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 20:44:22] 2026-04-27 18:43:50,257 | INFO     | will abort loop
[2026-04-27 20:44:22] 2026-04-27 18:43:50,263 | INFO     | all job control threads have been joined
[2026-04-27 20:44:22] 2026-04-27 18:43:50,357 | INFO     | all payload control threads have been joined
[2026-04-27 20:44:22] 2026-04-27 18:43:51,037 | INFO     | all data control threads have been joined
[2026-04-27 20:44:22] 2026-04-27 18:43:51,239 | INFO     | [job] queue monitor thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,242 | INFO     | [job] retrieve thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,248 | INFO     | [data] copytool_in thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 20:44:22] 2026-04-27 18:43:51,262 | INFO     | [job] job monitor thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,269 | INFO     | [job] control thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,356 | INFO     | [payload] failed_post thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,362 | INFO     | [payload] control thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,370 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:51,872 | INFO     | [job] validate thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:52,013 | INFO     | [payload] validate_post thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:52,043 | INFO     | [data] control thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:52,493 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:52,625 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:53,111 | INFO     | [monitor] cgroup control has ended
[2026-04-27 20:44:22] 2026-04-27 18:43:53,259 | INFO     | [data] copytool_out thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:54,240 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 20:44:22] 2026-04-27 18:43:56,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22840666937152)>', '<ExcThread(monitor, started 22840365541120)>']
[2026-04-27 20:44:22] 2026-04-27 18:43:56,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 20:44:22] 2026-04-27 18:43:56,264 | INFO     | [monitor] control thread has ended
[2026-04-27 20:44:22] 2026-04-27 18:44:01,183 | INFO     | all workflow threads have been joined
[2026-04-27 20:44:22] 2026-04-27 18:44:01,183 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 20:44:22] 2026-04-27 18:44:01,183 | INFO     | traces error code: 0
[2026-04-27 20:44:22] 2026-04-27 18:44:01,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 20:44:22] 2026-04-27 18:44:01,288 [wrapper] ==== pilot stdout END ====
[2026-04-27 20:44:22] 2026-04-27 18:44:01,291 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 20:44:22] 2026-04-27 18:44:01,293 [wrapper] pilotpid: 627379
[2026-04-27 20:44:22] 2026-04-27 18:44:01,295 [wrapper] Pilot exit status: 0
[2026-04-27 20:44:22] 2026-04-27 18:44:01,305 [wrapper] pandaids: 7114695504
[2026-04-27 20:44:22] 2026-04-27 18:44:01,356 [wrapper] cleanup supervisor_pilot  780841 627380
[2026-04-27 20:44:22] 2026-04-27 18:44:01,358 [wrapper] Test setup, not cleaning
[2026-04-27 20:44:22] 2026-04-27 18:44:01,361 [wrapper] apfmon messages muted
[2026-04-27 20:44:22] 2026-04-27 18:44:01,364 [wrapper] ==== wrapper stdout END ====
[2026-04-27 20:44:22] 2026-04-27 18:44:01,366 [wrapper] ==== wrapper stderr END ====
[2026-04-27 20:44:22]  *** Error codes and diagnostics ***
[2026-04-27 20:44:22]     "exeErrorCode": 0,
[2026-04-27 20:44:22]     "pilotErrorCode": 0,
[2026-04-27 20:44:22]  *** Listing of results directory ***
[2026-04-27 20:44:22] total 489392
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc    683926 Apr 26 14:59 pilot3.tar.gz
[2026-04-27 20:44:22] -rwx------. 1 boinc boinc     36322 Apr 26 15:46 runpilot2-wrapper.sh
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:50 queuedata.json
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc       100 Apr 27 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 20:44:22] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 16:02 run_atlas
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc       105 Apr 27 16:02 job.xml
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc      6263 Apr 27 16:02 init_data.xml
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc 297879917 Apr 27 16:02 EVNT.49475132._000008.pool.root.1
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc     15667 Apr 27 16:02 start_atlas.sh
[2026-04-27 20:44:22] drwxrwx--x. 2 boinc boinc      4096 Apr 27 16:02 shared
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc    697441 Apr 27 16:02 input.tar.gz
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc         0 Apr 27 16:02 boinc_lockfile
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc      2637 Apr 27 16:02 pandaJob.out
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc    996913 Apr 27 16:02 agis_schedconf.cvmfs.json
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc       451 Apr 27 16:02 workernode_map.json
[2026-04-27 20:44:22] drwx------. 5 boinc boinc      4096 Apr 27 16:02 pilot3
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc 195242872 Apr 27 20:43 HITS.49499859._000765.pool.root.1
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc        95 Apr 27 20:43 pilot_heartbeat.json
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc       488 Apr 27 20:43 boinc_task_state.xml
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc      1031 Apr 27 20:43 memory_monitor_summary.json
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc   1512704 Apr 27 20:43 agis_ddmendpoints.agis.ALL.json
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc    357492 Apr 27 20:43 log.49499859._000765.job.log.tgz.1
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc      6409 Apr 27 20:43 heartbeat_new.json
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc      6300 Apr 27 20:43 heartbeat.json
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc        27 Apr 27 20:43 wrapper_checkpoint.txt
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc      4746 Apr 27 20:44 pilotlog.txt
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc   1580720 Apr 27 20:44 log.49499859._000765.job.log.1
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc       357 Apr 27 20:44 output.list
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc       410 Apr 27 20:44 runtime_log
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc   1955840 Apr 27 20:44 result.tar.gz
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc      8823 Apr 27 20:44 runtime_log.err
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc       664 Apr 27 20:44 173f6bd1be83.diag
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc      8192 Apr 27 20:44 boinc_mmap_file
[2026-04-27 20:44:22] -rw-r--r--. 1 boinc boinc     20771 Apr 27 20:44 stderr.txt
[2026-04-27 20:44:22] HITS file was successfully produced:
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc 195242872 Apr 27 20:43 shared/HITS.pool.root.1
[2026-04-27 20:44:22]  *** Contents of shared directory: ***
[2026-04-27 20:44:22] total 484188
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc 297879917 Apr 27 16:02 ATLAS.root_0
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc     15667 Apr 27 16:02 start_atlas.sh
[2026-04-27 20:44:22] -rw-r--r--. 2 boinc boinc    697441 Apr 27 16:02 input.tar.gz
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc 195242872 Apr 27 20:43 HITS.pool.root.1
[2026-04-27 20:44:22] -rw-------. 1 boinc boinc   1955840 Apr 27 20:44 result.tar.gz
20:44:24 (623374): run_atlas exited; CPU time 64663.516916
20:44:24 (623374): called boinc_finish(0)

</stderr_txt>
]]>

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