Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:55:58 (32374): wrapper (7.7.26015): starting
19:55:58 (32374): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 19:55:58] Arguments: --nthreads 8
[2026-04-26 19:55:58] Threads: 8
[2026-04-26 19:55:58] Checking for CVMFS
[2026-04-26 19:55:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 19:56:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 19:56:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 19:56:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 19:56:04] 2.11.2.0 10636 15892 100984 158898 1 11 13917908 25165825 96 130560 0 5851683 99.886 5077356 14193 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 19:56:04] CVMFS is ok
[2026-04-26 19:56:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 19:56:04] Checking for apptainer binary...
[2026-04-26 19:56:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 19:56:04] Running /usr/bin/apptainer --version
[2026-04-26 19:56:04] apptainer version 1.3.2-1.el7
[2026-04-26 19:56:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 19:56:20] cg-vwn366.simple-grid.lan
[2026-04-26 19:56:20] apptainer works
[2026-04-26 19:56:20] Set ATHENA_PROC_NUMBER=8
[2026-04-26 19:56:20] Set ATHENA_CORE_NUMBER=8
[2026-04-26 19:56:20] Starting ATLAS job with PandaID=7116129202
[2026-04-26 19:56:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 23:51:19]  *** The last 200 lines of the pilot log: ***
[2026-04-26 23:51:19] 2026-04-26 21:50:14,137 | INFO     | this job has now completed (state=finished)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,138 | INFO     | log transfer has been attempted: DONE
[2026-04-26 23:51:19] 2026-04-26 21:50:14,138 | INFO     | job 7116129202 has finished - writing final server update
[2026-04-26 23:51:19] 2026-04-26 21:50:14,138 | INFO     | total number of processed events: 400 (read)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,140 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7116129202/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,141 | INFO     | extracted standard info from prmon json
[2026-04-26 23:51:19] 2026-04-26 21:50:14,141 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 23:51:19] 2026-04-26 21:50:14,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 23:51:19] 2026-04-26 21:50:14,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 23:51:19] 2026-04-26 21:50:14,147 | INFO     | fitting pss+swap vs Time
[2026-04-26 23:51:19] 2026-04-26 21:50:14,147 | INFO     | sum of square deviations: 3256879670.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,149 | INFO     | sum of deviations: 81240335153.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,149 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,149 | INFO     | mean y: 2464366.296803653
[2026-04-26 23:51:19] 2026-04-26 21:50:14,150 | INFO     | intersect: 2464366.296803653
[2026-04-26 23:51:19] 2026-04-26 21:50:14,150 | INFO     | chi2: 8.176309629921013
[2026-04-26 23:51:19] 2026-04-26 21:50:14,150 | INFO     | sum of square deviations: 3038856977.5
[2026-04-26 23:51:19] 2026-04-26 21:50:14,152 | INFO     | sum of deviations: 94612212466.49998
[2026-04-26 23:51:19] 2026-04-26 21:50:14,152 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,153 | INFO     | mean y: 2473522.1261682245
[2026-04-26 23:51:19] 2026-04-26 21:50:14,153 | INFO     | intersect: 2473522.1261682245
[2026-04-26 23:51:19] 2026-04-26 21:50:14,153 | INFO     | chi2: 7.421399457684711
[2026-04-26 23:51:19] 2026-04-26 21:50:14,153 | INFO     | current chi2=7.421399457684711 (change=9.232896091333506 %)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,153 | INFO     | right removable region: 213
[2026-04-26 23:51:19] 2026-04-26 21:50:14,154 | INFO     | sum of square deviations: 3038856977.5
[2026-04-26 23:51:19] 2026-04-26 21:50:14,160 | INFO     | sum of deviations: 4492920962.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,160 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,160 | INFO     | mean y: 2518004.1588785048
[2026-04-26 23:51:19] 2026-04-26 21:50:14,160 | INFO     | intersect: 2518004.1588785048
[2026-04-26 23:51:19] 2026-04-26 21:50:14,161 | INFO     | chi2: 3.1565154655389676
[2026-04-26 23:51:19] 2026-04-26 21:50:14,161 | INFO     | current chi2=3.1565154655389676 (change=61.39437462118883 %)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,161 | INFO     | sum of square deviations: 2830787960.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,163 | INFO     | sum of deviations: -45006239444.00002
[2026-04-26 23:51:19] 2026-04-26 21:50:14,163 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,163 | INFO     | mean y: 2554135.200956938
[2026-04-26 23:51:19] 2026-04-26 21:50:14,163 | INFO     | intersect: 2554135.200956938
[2026-04-26 23:51:19] 2026-04-26 21:50:14,164 | INFO     | chi2: 1.0123757092133325
[2026-04-26 23:51:19] 2026-04-26 21:50:14,164 | INFO     | current chi2=1.0123757092133325 (change=67.92742756163015 %)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,164 | INFO     | sum of square deviations: 2632440055.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,166 | INFO     | sum of deviations: -48824473688.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,166 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,166 | INFO     | mean y: 2557010.0196078434
[2026-04-26 23:51:19] 2026-04-26 21:50:14,166 | INFO     | intersect: 2557010.0196078434
[2026-04-26 23:51:19] 2026-04-26 21:50:14,167 | INFO     | chi2: 0.9550269636728886
[2026-04-26 23:51:19] 2026-04-26 21:50:14,167 | INFO     | current chi2=0.9550269636728886 (change=5.664769019893493 %)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,167 | INFO     | left removable region: 15
[2026-04-26 23:51:19] 2026-04-26 21:50:14,168 | INFO     | sum of square deviations: 2406926989.5
[2026-04-26 23:51:19] 2026-04-26 21:50:14,169 | INFO     | sum of deviations: -33271445787.5
[2026-04-26 23:51:19] 2026-04-26 21:50:14,169 | INFO     | mean x (centered): 0.0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,169 | INFO     | mean y: 2569346.3181818184
[2026-04-26 23:51:19] 2026-04-26 21:50:14,170 | INFO     | intersect: 2569346.3181818184
[2026-04-26 23:51:19] 2026-04-26 21:50:14,170 | INFO     | chi2: 0.0895087394911881
[2026-04-26 23:51:19] 2026-04-26 21:50:14,170 | INFO     | current memory leak: -13.82 B/s (using 198 data points, chi2=0.09)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,171 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,171 | INFO     | ..............................
[2026-04-26 23:51:19] 2026-04-26 21:50:14,171 | INFO     | . Timing measurements:
[2026-04-26 23:51:19] 2026-04-26 21:50:14,171 | INFO     | . get job = 0 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,171 | INFO     | . initial setup = 128 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | . payload setup = 176 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | . stage-in = 0 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | . payload execution = 13449 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | . stage-out = 3 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | . log creation = 1 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,172 | INFO     | ..............................
[2026-04-26 23:51:19] 2026-04-26 21:50:14,330 | INFO     | 
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | job summary report
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | --------------------------------------------------
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | PanDA job id: 7116129202
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | task id: 49912801
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | errors: (none)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | pilot state: finished 
[2026-04-26 23:51:19] 2026-04-26 21:50:14,331 | INFO     | transexitcode: 0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | exeerrorcode: 0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | exeerrordiag: 
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | exitcode: 0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | exitmsg: OK
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | cpuconsumptiontime: 56847 s
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | nevents: 400
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | neventsw: 0
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | pid: 8493
[2026-04-26 23:51:19] 2026-04-26 21:50:14,332 | INFO     | pgrp: 8493
[2026-04-26 23:51:19] 2026-04-26 21:50:14,340 | INFO     | corecount: 8
[2026-04-26 23:51:19] 2026-04-26 21:50:14,341 | INFO     | event service: False
[2026-04-26 23:51:19] 2026-04-26 21:50:14,341 | INFO     | sizes: {0: 2274713, 1: 2275024, 2: 2276626, 12: 2276626, 13630: 2306950, 13634: 2315948, 13635: 2316132, 13638: 2316326}
[2026-04-26 23:51:19] 2026-04-26 21:50:14,341 | INFO     | --------------------------------------------------
[2026-04-26 23:51:19] 2026-04-26 21:50:14,341 | INFO     | 
[2026-04-26 23:51:19] 2026-04-26 21:50:14,341 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-26 23:51:19] 2026-04-26 21:50:14,754 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,754 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,757 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 23:51:19] 2026-04-26 21:50:14,757 | INFO     | job 7116129202 has completed (purged errors)
[2026-04-26 23:51:19] 2026-04-26 21:50:14,757 | INFO     | overall cleanup function is called
[2026-04-26 23:51:19] 2026-04-26 21:50:15,768 | INFO     | --- collectZombieJob: --- 10, [8493]
[2026-04-26 23:51:19] 2026-04-26 21:50:15,769 | INFO     | zombie collector waiting for pid 8493
[2026-04-26 23:51:19] 2026-04-26 21:50:15,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 23:51:19] 2026-04-26 21:50:15,769 | INFO     | collected zombie processes
[2026-04-26 23:51:19] 2026-04-26 21:50:15,769 | INFO     | will attempt to kill all subprocesses of pid=8493
[2026-04-26 23:51:19] 2026-04-26 21:50:15,832 | INFO     | process IDs to be killed: [8493] (in reverse order)
[2026-04-26 23:51:19] 2026-04-26 21:50:16,492 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 23:51:19] 2026-04-26 21:50:16,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 23:51:19] 2026-04-26 21:50:16,495 | INFO     | did not find any defunct processes belonging to 8493
[2026-04-26 23:51:19] 2026-04-26 21:50:16,496 | INFO     | did not find any defunct processes belonging to 8493
[2026-04-26 23:51:19] 2026-04-26 21:50:16,496 | INFO     | Ready for new job
[2026-04-26 23:51:19] 2026-04-26 21:50:16,498 | INFO     | ***************************************
[2026-04-26 23:51:19] 2026-04-26 21:50:16,498 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 23:51:19] 2026-04-26 21:50:16,498 | INFO     | ***************************************
[2026-04-26 23:51:19] 2026-04-26 21:50:16,498 | INFO     | 
[2026-04-26 23:51:19] 2026-04-26 21:50:16,499 | INFO     | pilot is running in a VM
[2026-04-26 23:51:19] 2026-04-26 21:50:16,499 | INFO     | architecture information:
[2026-04-26 23:51:19] 2026-04-26 21:50:16,509 | INFO     | executing command: cat /etc/os-release
[2026-04-26 23:51:19] 2026-04-26 21:50:16,834 | INFO     | cat /etc/os-release:
[2026-04-26 23:51:19] NAME="CentOS Linux"
[2026-04-26 23:51:19] VERSION="7 (Core)"
[2026-04-26 23:51:19] ID="centos"
[2026-04-26 23:51:19] ID_LIKE="rhel fedora"
[2026-04-26 23:51:19] VERSION_ID="7"
[2026-04-26 23:51:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 23:51:19] ANSI_COLOR="0;31"
[2026-04-26 23:51:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 23:51:19] HOME_URL="https://www.centos.org/"
[2026-04-26 23:51:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 23:51:19] 
[2026-04-26 23:51:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 23:51:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 23:51:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 23:51:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 23:51:19] 
[2026-04-26 23:51:19] 2026-04-26 21:50:16,835 | INFO     | ***************************************
[2026-04-26 23:51:19] 2026-04-26 21:50:17,339 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-26 23:51:19] 2026-04-26 21:50:17,639 | INFO     | sufficient remaining disk space (496565747712 B)
[2026-04-26 23:51:19] 2026-04-26 21:50:17,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 23:51:19] 2026-04-26 21:50:17,640 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 23:51:19] 2026-04-26 21:50:17,640 | INFO     | update_server=False
[2026-04-26 23:51:19] 2026-04-26 21:50:17,640 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 23:51:19] 2026-04-26 21:50:17,680 | INFO     | all data control threads have been joined
[2026-04-26 23:51:19] 2026-04-26 21:50:18,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 23:51:19] 2026-04-26 21:50:18,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 23:51:19] 2026-04-26 21:50:18,118 | INFO     | aborting loop
[2026-04-26 23:51:19] 2026-04-26 21:50:18,391 | INFO     | all payload control threads have been joined
[2026-04-26 23:51:19] 2026-04-26 21:50:18,480 | INFO     | all job control threads have been joined
[2026-04-26 23:51:19] 2026-04-26 21:50:18,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 23:51:19] 2026-04-26 21:50:18,647 | INFO     | [job] retrieve thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:18,687 | INFO     | [data] control thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:18,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,096 | INFO     | [data] copytool_in thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,124 | INFO     | [job] job monitor thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,200 | INFO     | [payload] validate_post thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,202 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,313 | INFO     | [payload] failed_post thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 23:51:19] 2026-04-26 21:50:19,398 | INFO     | [payload] control thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,487 | INFO     | [job] control thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,706 | INFO     | [job] validate thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:19,819 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:20,000 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:20,351 | INFO     | [job] queue monitor thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:20,641 | INFO     | [data] copytool_out thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:22,110 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 23:51:19] 2026-04-26 21:50:47,170 | INFO     | PID=4026 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-26 23:51:19] 2026-04-26 21:50:47,170 | INFO     | .. there are 2 such processes running
[2026-04-26 23:51:19] 2026-04-26 21:50:47,172 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 23:51:19] 2026-04-26 21:50:47,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 23:51:19] 2026-04-26 21:50:47,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 23:51:19] 2026-04-26 21:51:06,969 | INFO     | [monitor] cgroup control has ended
[2026-04-26 23:51:19] 2026-04-26 21:51:08,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941429221184)>', '<ExcThread(monitor, started 139940688025344)>']
[2026-04-26 23:51:19] 2026-04-26 21:51:08,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 23:51:19] 2026-04-26 21:51:08,299 | INFO     | [monitor] control thread has ended
[2026-04-26 23:51:19] 2026-04-26 21:51:13,094 | INFO     | all workflow threads have been joined
[2026-04-26 23:51:19] 2026-04-26 21:51:13,095 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 23:51:19] 2026-04-26 21:51:13,095 | INFO     | traces error code: 0
[2026-04-26 23:51:19] 2026-04-26 21:51:13,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 23:51:19] 2026-04-26 21:51:13,652 [wrapper] ==== pilot stdout END ====
[2026-04-26 23:51:19] 2026-04-26 21:51:13,752 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 23:51:19] 2026-04-26 21:51:13,902 [wrapper] pilotpid: 4026
[2026-04-26 23:51:19] 2026-04-26 21:51:14,050 [wrapper] Pilot exit status: 0
[2026-04-26 23:51:19] 2026-04-26 21:51:14,540 [wrapper] pandaids: 7116129202
[2026-04-26 23:51:19] 2026-04-26 21:51:15,893 [wrapper] cleanup supervisor_pilot 26526 4027
[2026-04-26 23:51:19] 2026-04-26 21:51:15,999 [wrapper] Test setup, not cleaning
[2026-04-26 23:51:19] 2026-04-26 21:51:16,075 [wrapper] apfmon messages muted
[2026-04-26 23:51:19] 2026-04-26 21:51:16,163 [wrapper] ==== wrapper stdout END ====
[2026-04-26 23:51:19] 2026-04-26 21:51:16,304 [wrapper] ==== wrapper stderr END ====
[2026-04-26 23:51:19]  *** Error codes and diagnostics ***
[2026-04-26 23:51:19]     "exeErrorCode": 0,
[2026-04-26 23:51:19]     "pilotErrorCode": 0,
[2026-04-26 23:51:19]  *** Listing of results directory ***
[2026-04-26 23:51:19] total 469040
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc    683926 Apr 26 18:08 pilot3.tar.gz
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc      5631 Apr 26 18:51 queuedata.json
[2026-04-26 23:51:19] -rwx------. 1 boinc boinc     36322 Apr 26 18:52 runpilot2-wrapper.sh
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc       100 Apr 26 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 23:51:19] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 19:55 run_atlas
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc       105 Apr 26 19:55 job.xml
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc      6305 Apr 26 19:55 init_data.xml
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc 278361077 Apr 26 19:55 EVNT.49912796._000011.pool.root.1
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc     15667 Apr 26 19:55 start_atlas.sh
[2026-04-26 23:51:19] drwxrwx--x. 2 boinc boinc        68 Apr 26 19:55 shared
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc    697437 Apr 26 19:55 input.tar.gz
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc         0 Apr 26 19:55 boinc_lockfile
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc      2675 Apr 26 19:56 pandaJob.out
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc       415 Apr 26 20:02 workernode_map.json
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc    997530 Apr 26 20:02 agis_schedconf.cvmfs.json
[2026-04-26 23:51:19] drwx------. 5 boinc boinc      4096 Apr 26 20:02 pilot3
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc 194536533 Apr 26 23:48 HITS.49912801._000251.pool.root.1
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc       489 Apr 26 23:48 boinc_task_state.xml
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc      1021 Apr 26 23:50 memory_monitor_summary.json
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc   1509089 Apr 26 23:50 agis_ddmendpoints.agis.ALL.json
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc    371965 Apr 26 23:50 log.49912801._000251.job.log.tgz.1
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc      6339 Apr 26 23:50 heartbeat_new.json
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc      6230 Apr 26 23:50 heartbeat.json
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc        95 Apr 26 23:50 pilot_heartbeat.json
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc      8192 Apr 26 23:51 boinc_mmap_file
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc        28 Apr 26 23:51 wrapper_checkpoint.txt
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc      4882 Apr 26 23:51 pilotlog.txt
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc   1268840 Apr 26 23:51 log.49912801._000251.job.log.1
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc       357 Apr 26 23:51 output.list
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc       410 Apr 26 23:51 runtime_log
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc   1658880 Apr 26 23:51 result.tar.gz
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc      8439 Apr 26 23:51 runtime_log.err
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc       656 Apr 26 23:51 42b18f8b4d59.diag
[2026-04-26 23:51:19] -rw-r--r--. 1 boinc boinc     20622 Apr 26 23:51 stderr.txt
[2026-04-26 23:51:19] HITS file was successfully produced:
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc 194536533 Apr 26 23:48 shared/HITS.pool.root.1
[2026-04-26 23:51:19]  *** Contents of shared directory: ***
[2026-04-26 23:51:19] total 464140
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc 278361077 Apr 26 19:55 ATLAS.root_0
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc     15667 Apr 26 19:55 start_atlas.sh
[2026-04-26 23:51:19] -rw-r--r--. 2 boinc boinc    697437 Apr 26 19:55 input.tar.gz
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc 194536533 Apr 26 23:48 HITS.pool.root.1
[2026-04-26 23:51:19] -rw-------. 1 boinc boinc   1658880 Apr 26 23:51 result.tar.gz
23:51:21 (32374): run_atlas exited; CPU time 56972.914176
23:51:21 (32374): called boinc_finish(0)

</stderr_txt>
]]>

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