Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:51 (16083): wrapper (7.7.26015): starting
18:54:51 (16083): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 18:54:51] Arguments: --nthreads 8
[2026-04-26 18:54:51] Threads: 8
[2026-04-26 18:54:51] Checking for CVMFS
[2026-04-26 18:54:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 18:54:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 18:54:57] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 18:54:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 18:54:58] 2.11.2.0 2799 15845 96400 158896 2 11 13655582 25165825 96 130560 0 9451850 99.787 10102342 11126 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 18:54:58] CVMFS is ok
[2026-04-26 18:54:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 18:54:58] Checking for apptainer binary...
[2026-04-26 18:54:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 18:54:58] Running /usr/bin/apptainer --version
[2026-04-26 18:54:58] apptainer version 1.3.2-1.el7
[2026-04-26 18:54:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 18:55:04] cg-vwn400.simple-grid.lan
[2026-04-26 18:55:04] apptainer works
[2026-04-26 18:55:04] Set ATHENA_PROC_NUMBER=8
[2026-04-26 18:55:04] Set ATHENA_CORE_NUMBER=8
[2026-04-26 18:55:04] Starting ATLAS job with PandaID=7114723831
[2026-04-26 18:55:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 00:27:26]  *** The last 200 lines of the pilot log: ***
[2026-04-27 00:27:26] 2026-04-26 22:26:41,729 | INFO     |  -- lfn=log.49863879._000073.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 00:27:26] 2026-04-26 22:26:41,730 | INFO     | stage-out finished correctly
[2026-04-27 00:27:26] 2026-04-26 22:26:41,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 00:27:26] 2026-04-26 22:26:42,122 | INFO     | job 7114723831 has state=finished
[2026-04-27 00:27:26] 2026-04-26 22:26:42,122 | INFO     | preparing for final server update for job 7114723831 in state='finished'
[2026-04-27 00:27:26] 2026-04-26 22:26:42,122 | INFO     | reading metadata from: /var/lib/boinc/slots/19/PanDA_Pilot-7114723831/jobReport.json
[2026-04-27 00:27:26] 2026-04-26 22:26:42,125 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/19/workernode_map.json
[2026-04-27 00:27:26] 2026-04-26 22:26:42,126 | INFO     | this job has now completed (state=finished)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,126 | INFO     | log transfer has been attempted: DONE
[2026-04-27 00:27:26] 2026-04-26 22:26:42,126 | INFO     | job 7114723831 has finished - writing final server update
[2026-04-27 00:27:26] 2026-04-26 22:26:42,127 | INFO     | total number of processed events: 400 (read)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,129 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7114723831/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,129 | INFO     | extracted standard info from prmon json
[2026-04-27 00:27:26] 2026-04-26 22:26:42,130 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 00:27:26] 2026-04-26 22:26:42,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 00:27:26] 2026-04-26 22:26:42,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 00:27:26] 2026-04-26 22:26:42,137 | INFO     | fitting pss+swap vs Time
[2026-04-27 00:27:26] 2026-04-26 22:26:42,137 | INFO     | sum of square deviations: 9599817202.5
[2026-04-27 00:27:26] 2026-04-26 22:26:42,141 | INFO     | sum of deviations: 93262544095.49998
[2026-04-27 00:27:26] 2026-04-26 22:26:42,141 | INFO     | mean x (centered): 0.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,141 | INFO     | mean y: 2492273.1815286623
[2026-04-27 00:27:26] 2026-04-26 22:26:42,141 | INFO     | intersect: 2492273.1815286623
[2026-04-27 00:27:26] 2026-04-26 22:26:42,142 | INFO     | chi2: 5.626511094132931
[2026-04-27 00:27:26] 2026-04-26 22:26:42,142 | INFO     | sum of square deviations: 9148487810.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,145 | INFO     | sum of deviations: 112586638599.99997
[2026-04-27 00:27:26] 2026-04-26 22:26:42,146 | INFO     | mean x (centered): 0.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,146 | INFO     | mean y: 2498710.349514563
[2026-04-27 00:27:26] 2026-04-26 22:26:42,146 | INFO     | intersect: 2498710.349514563
[2026-04-27 00:27:26] 2026-04-26 22:26:42,146 | INFO     | chi2: 4.885765490102431
[2026-04-27 00:27:26] 2026-04-26 22:26:42,147 | INFO     | current chi2=4.885765490102431 (change=13.165274032835653 %)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,147 | INFO     | right removable region: 308
[2026-04-27 00:27:26] 2026-04-26 22:26:42,147 | INFO     | sum of square deviations: 9148487810.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,150 | INFO     | sum of deviations: -16999031711.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,151 | INFO     | mean x (centered): 0.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,151 | INFO     | mean y: 2529494.9611650486
[2026-04-27 00:27:26] 2026-04-26 22:26:42,151 | INFO     | intersect: 2529494.9611650486
[2026-04-27 00:27:26] 2026-04-26 22:26:42,151 | INFO     | chi2: 1.0320700746523574
[2026-04-27 00:27:26] 2026-04-26 22:26:42,152 | INFO     | current chi2=1.0320700746523574 (change=81.65701520203963 %)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,152 | INFO     | sum of square deviations: 8711530780.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,155 | INFO     | sum of deviations: -33394660084.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,155 | INFO     | mean x (centered): 0.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,155 | INFO     | mean y: 2535183.138157895
[2026-04-27 00:27:26] 2026-04-26 22:26:42,156 | INFO     | intersect: 2535183.138157895
[2026-04-27 00:27:26] 2026-04-26 22:26:42,156 | INFO     | chi2: 0.8850255739392483
[2026-04-27 00:27:26] 2026-04-26 22:26:42,156 | INFO     | current chi2=0.8850255739392483 (change=14.247530698207642 %)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,156 | INFO     | left removable region: 10
[2026-04-27 00:27:26] 2026-04-26 22:26:42,157 | INFO     | sum of square deviations: 8205826414.5
[2026-04-27 00:27:26] 2026-04-26 22:26:42,160 | INFO     | sum of deviations: -12706624459.000006
[2026-04-27 00:27:26] 2026-04-26 22:26:42,160 | INFO     | mean x (centered): 0.0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,160 | INFO     | mean y: 2542546.275167785
[2026-04-27 00:27:26] 2026-04-26 22:26:42,161 | INFO     | intersect: 2542546.275167785
[2026-04-27 00:27:26] 2026-04-26 22:26:42,161 | INFO     | chi2: 0.09634033787591495
[2026-04-27 00:27:26] 2026-04-26 22:26:42,161 | INFO     | current memory leak: -1.55 B/s (using 298 data points, chi2=0.10)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,162 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,162 | INFO     | ..............................
[2026-04-27 00:27:26] 2026-04-26 22:26:42,162 | INFO     | . Timing measurements:
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . get job = 0 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . initial setup = 115 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . payload setup = 220 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . stage-in = 0 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . payload execution = 19259 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . stage-out = 3 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | . log creation = 1 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,163 | INFO     | ..............................
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | 
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | job summary report
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | --------------------------------------------------
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | PanDA job id: 7114723831
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | task id: 49863879
[2026-04-27 00:27:26] 2026-04-26 22:26:42,305 | INFO     | errors: (none)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | pilot state: finished 
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | transexitcode: 0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | exeerrorcode: 0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | exeerrordiag: 
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | exitcode: 0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | exitmsg: OK
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | cpuconsumptiontime: 79403 s
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | nevents: 400
[2026-04-27 00:27:26] 2026-04-26 22:26:42,306 | INFO     | neventsw: 0
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | pid: 24614
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | pgrp: 24614
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | corecount: 8
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | event service: False
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | sizes: {0: 2273998, 1: 2272341, 2: 2276485, 12: 2276513, 19483: 2309673, 19487: 2318995}
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | --------------------------------------------------
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | 
[2026-04-27 00:27:26] 2026-04-26 22:26:42,307 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-04-27 00:27:26] 2026-04-26 22:26:42,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,628 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,631 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 00:27:26] 2026-04-26 22:26:42,631 | INFO     | job 7114723831 has completed (purged errors)
[2026-04-27 00:27:26] 2026-04-26 22:26:42,631 | INFO     | overall cleanup function is called
[2026-04-27 00:27:26] 2026-04-26 22:26:43,640 | INFO     | --- collectZombieJob: --- 10, [24614]
[2026-04-27 00:27:26] 2026-04-26 22:26:43,640 | INFO     | zombie collector waiting for pid 24614
[2026-04-27 00:27:26] 2026-04-26 22:26:43,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 00:27:26] 2026-04-26 22:26:43,640 | INFO     | collected zombie processes
[2026-04-27 00:27:26] 2026-04-26 22:26:43,640 | INFO     | will attempt to kill all subprocesses of pid=24614
[2026-04-27 00:27:26] 2026-04-26 22:26:43,704 | INFO     | process IDs to be killed: [24614] (in reverse order)
[2026-04-27 00:27:26] 2026-04-26 22:26:44,616 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 00:27:26] 2026-04-26 22:26:44,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 00:27:26] 2026-04-26 22:26:44,619 | INFO     | did not find any defunct processes belonging to 24614
[2026-04-27 00:27:26] 2026-04-26 22:26:44,620 | INFO     | did not find any defunct processes belonging to 24614
[2026-04-27 00:27:26] 2026-04-26 22:26:44,621 | INFO     | Ready for new job
[2026-04-27 00:27:26] 2026-04-26 22:26:44,628 | INFO     | ***************************************
[2026-04-27 00:27:26] 2026-04-26 22:26:44,628 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 00:27:26] 2026-04-26 22:26:44,628 | INFO     | ***************************************
[2026-04-27 00:27:26] 2026-04-26 22:26:44,628 | INFO     | 
[2026-04-27 00:27:26] 2026-04-26 22:26:44,629 | INFO     | pilot is running in a VM
[2026-04-27 00:27:26] 2026-04-26 22:26:44,629 | INFO     | architecture information:
[2026-04-27 00:27:26] 2026-04-26 22:26:44,643 | INFO     | executing command: cat /etc/os-release
[2026-04-27 00:27:26] 2026-04-26 22:26:45,042 | INFO     | cat /etc/os-release:
[2026-04-27 00:27:26] NAME="CentOS Linux"
[2026-04-27 00:27:26] VERSION="7 (Core)"
[2026-04-27 00:27:26] ID="centos"
[2026-04-27 00:27:26] ID_LIKE="rhel fedora"
[2026-04-27 00:27:26] VERSION_ID="7"
[2026-04-27 00:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 00:27:26] ANSI_COLOR="0;31"
[2026-04-27 00:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 00:27:26] HOME_URL="https://www.centos.org/"
[2026-04-27 00:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 00:27:26] 
[2026-04-27 00:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 00:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 00:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 00:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 00:27:26] 
[2026-04-27 00:27:26] 2026-04-26 22:26:45,042 | INFO     | ***************************************
[2026-04-27 00:27:26] 2026-04-26 22:26:45,546 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-04-27 00:27:26] 2026-04-26 22:26:45,826 | INFO     | sufficient remaining disk space (496413704192 B)
[2026-04-27 00:27:26] 2026-04-26 22:26:45,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 00:27:26] 2026-04-26 22:26:45,827 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 00:27:26] 2026-04-26 22:26:45,827 | INFO     | update_server=False
[2026-04-27 00:27:26] 2026-04-26 22:26:45,827 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 00:27:26] 2026-04-26 22:26:45,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 00:27:26] 2026-04-26 22:26:46,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 00:27:26] 2026-04-26 22:26:46,240 | INFO     | aborting loop
[2026-04-27 00:27:26] 2026-04-26 22:26:46,498 | INFO     | all data control threads have been joined
[2026-04-27 00:27:26] 2026-04-26 22:26:46,610 | INFO     | all payload control threads have been joined
[2026-04-27 00:27:26] 2026-04-26 22:26:46,833 | INFO     | [job] retrieve thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,055 | INFO     | all job control threads have been joined
[2026-04-27 00:27:26] 2026-04-26 22:26:47,072 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,246 | INFO     | [job] job monitor thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,287 | INFO     | [payload] validate_post thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,319 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 00:27:26] 2026-04-26 22:26:47,334 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,365 | INFO     | [job] validate thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,504 | INFO     | [data] control thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,616 | INFO     | [payload] control thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,797 | INFO     | [payload] failed_post thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,834 | INFO     | [data] copytool_out thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:47,842 | INFO     | [data] copytool_in thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:48,061 | INFO     | [job] control thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:48,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 00:27:26] 2026-04-26 22:26:48,173 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:48,329 | INFO     | [job] queue monitor thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:26:52,143 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 00:27:26] 2026-04-26 22:27:14,397 | INFO     | PID=20127 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 00:27:26] 2026-04-26 22:27:14,397 | INFO     | .. there are 2 such processes running
[2026-04-27 00:27:26] 2026-04-26 22:27:14,397 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 00:27:26] 2026-04-26 22:27:14,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 00:27:26] 2026-04-26 22:27:14,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 00:27:26] 2026-04-26 22:27:15,338 | INFO     | [monitor] cgroup control has ended
[2026-04-27 00:27:26] 2026-04-26 22:27:15,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737521223488)>', '<ExcThread(monitor, started 139737079731968)>']
[2026-04-27 00:27:26] 2026-04-26 22:27:16,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 00:27:26] 2026-04-26 22:27:16,409 | INFO     | [monitor] control thread has ended
[2026-04-27 00:27:26] 2026-04-26 22:27:20,876 | INFO     | all workflow threads have been joined
[2026-04-27 00:27:26] 2026-04-26 22:27:20,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 00:27:26] 2026-04-26 22:27:20,876 | INFO     | traces error code: 0
[2026-04-27 00:27:26] 2026-04-26 22:27:20,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 00:27:26] 2026-04-26 22:27:21,269 [wrapper] ==== pilot stdout END ====
[2026-04-27 00:27:26] 2026-04-26 22:27:21,365 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 00:27:26] 2026-04-26 22:27:21,442 [wrapper] pilotpid: 20127
[2026-04-27 00:27:26] 2026-04-26 22:27:21,543 [wrapper] Pilot exit status: 0
[2026-04-27 00:27:26] 2026-04-26 22:27:22,055 [wrapper] pandaids: 7114723831
[2026-04-27 00:27:26] 2026-04-26 22:27:23,042 [wrapper] cleanup supervisor_pilot 11019 20128
[2026-04-27 00:27:26] 2026-04-26 22:27:23,126 [wrapper] Test setup, not cleaning
[2026-04-27 00:27:26] 2026-04-26 22:27:23,257 [wrapper] apfmon messages muted
[2026-04-27 00:27:26] 2026-04-26 22:27:23,387 [wrapper] ==== wrapper stdout END ====
[2026-04-27 00:27:26] 2026-04-26 22:27:23,514 [wrapper] ==== wrapper stderr END ====
[2026-04-27 00:27:26]  *** Error codes and diagnostics ***
[2026-04-27 00:27:26]     "exeErrorCode": 0,
[2026-04-27 00:27:26]     "pilotErrorCode": 0,
[2026-04-27 00:27:26]  *** Listing of results directory ***
[2026-04-27 00:27:26] total 474292
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc    683926 Apr 26 16:58 pilot3.tar.gz
[2026-04-27 00:27:26] -rwx------. 1 boinc boinc     36322 Apr 26 17:01 runpilot2-wrapper.sh
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc      5631 Apr 26 17:03 queuedata.json
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc       100 Apr 26 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 00:27:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 18:54 run_atlas
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc       105 Apr 26 18:54 job.xml
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc 261806061 Apr 26 18:54 EVNT.49863876._000009.pool.root.1
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc     15667 Apr 26 18:54 start_atlas.sh
[2026-04-27 00:27:26] drwxrwx--x. 2 boinc boinc        68 Apr 26 18:54 shared
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc    697411 Apr 26 18:54 input.tar.gz
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc      6307 Apr 26 18:54 init_data.xml
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc         0 Apr 26 18:54 boinc_lockfile
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc      2573 Apr 26 18:55 pandaJob.out
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc       415 Apr 26 19:01 workernode_map.json
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc    997522 Apr 26 19:01 agis_schedconf.cvmfs.json
[2026-04-27 00:27:26] drwx------. 5 boinc boinc      4096 Apr 26 19:01 pilot3
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc 215254959 Apr 27 00:25 HITS.49863879._000073.pool.root.1
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc       489 Apr 27 00:25 boinc_task_state.xml
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc        95 Apr 27 00:26 pilot_heartbeat.json
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc      1021 Apr 27 00:26 memory_monitor_summary.json
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc   1509089 Apr 27 00:26 agis_ddmendpoints.agis.ALL.json
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc    452277 Apr 27 00:26 log.49863879._000073.job.log.tgz.1
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc      6339 Apr 27 00:26 heartbeat_new.json
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc      6230 Apr 27 00:26 heartbeat.json
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc        28 Apr 27 00:27 wrapper_checkpoint.txt
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc      8192 Apr 27 00:27 boinc_mmap_file
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc      4884 Apr 27 00:27 pilotlog.txt
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc   1796731 Apr 27 00:27 log.49863879._000073.job.log.1
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc       357 Apr 27 00:27 output.list
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc       410 Apr 27 00:27 runtime_log
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc   2263040 Apr 27 00:27 result.tar.gz
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc      8455 Apr 27 00:27 runtime_log.err
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc       656 Apr 27 00:27 28e5209d97da.diag
[2026-04-27 00:27:26] -rw-r--r--. 1 boinc boinc     20825 Apr 27 00:27 stderr.txt
[2026-04-27 00:27:26] HITS file was successfully produced:
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc 215254959 Apr 27 00:25 shared/HITS.pool.root.1
[2026-04-27 00:27:26]  *** Contents of shared directory: ***
[2026-04-27 00:27:26] total 468796
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc 261806061 Apr 26 18:54 ATLAS.root_0
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc     15667 Apr 26 18:54 start_atlas.sh
[2026-04-27 00:27:26] -rw-r--r--. 2 boinc boinc    697411 Apr 26 18:54 input.tar.gz
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc 215254959 Apr 27 00:25 HITS.pool.root.1
[2026-04-27 00:27:26] -rw-------. 1 boinc boinc   2263040 Apr 27 00:27 result.tar.gz
00:27:28 (16083): run_atlas exited; CPU time 79582.974787
00:27:28 (16083): called boinc_finish(0)

</stderr_txt>
]]>

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